washc5 (kiaa0196,strumpellin,LOC107666741)


Basic Information

Item Value
gene id washc5
gene name kiaa0196,strumpellin,LOC107666741
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20062776 ~ 20074718 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261482.1
CGACCAATGAGTTCTTCTCGTGACACTCACGTGATTTGTAAACAGGAAGCGTCTGATCTGTACTGCAGAGGATCTGGCCATCACTGAGGAGACTGAATGAATCTTTGAATAGAGAACAGATCTGTTGTTTTCTTCCTCATCATGGTGGACTTTCTGGCAGAGAACAACCTGTGTGGTCAGGCCATCCTCCGGATTGTGTCCAGAGGAAATGCCATCATAGCAGAATTACTCAGACTGTCAGAATTTATTCCTGCAGTTTTCAGACTCAAAGACAAGAGCGACCAACAGAAATATGGAGACATAATCTGTGATTTCAGCTATTTTAAGGGTCCGGAGTATTATGAGAGTAAGCTGGAAGCAAAGCCAGAGCTGCAGGATTTGGATGAGGAGTTTCGGGAAAATAACATTGAAATATTAACACGGTTCTACTTGGCCTTCGAAAGTGTCCATAAATATGTTGTTGACTTGATAAgGTATTTGGATGATCTCAATGAAGGGGTCTACATTCAGCAAACGCTagaaactgttttgttgaatgaAGATGGGAAACAGCTCCTGTGTGAGGCTCTGTACCTGTATGGAGTCATGTTACTGGTCATTGATCAAAAGATGGAGGGGGAGGTGAGAGAAAGGATGCTGGTGTCCTACTATAGATACAGTGCTGCTCGATCCTCGGCCGACTCCAACCTGGATGACATCTGCAAGCTCCTGCGCAGTACGGGATACTCCAGCCACCCGGGGGCCAAACGGCCACCCAACTACCCTGAAAGCTACTTCCAGAGAGTTCCCATCAGCACCACCTTCATCAGTATGGTGATCGGCCGCCTCCGCTCCGATGACATTTACAACCAGGTGTCTGCGTATCCTCTGCCGGAGCACCGCAGTACAGCGCTGGCCACGCAGGCCGCTATGCTGTGTGTCTGCTTATACTTCACTCCCTCCATCCTGCATACACAACAGGCCAAGATGAGAGAGATCGTGGACAAATACTTCCCTGACAACTGGGTTATAAGCATATATATGGGGATCACTGTGAATCTAGTGGAGGCGTGGGAACCATATAAAGCTGCTAAAACAGCCCTGAACTACACATTGGACACCGCCAACATCAAAGAACAGGCCGGTCGATACGCTGCCAGTGTGGAGAGTTTGCGGCCGCAGGTGCAGCAGTTATTAAAGGAGGGATTCCTGAGAGAAGAAATAGTCCTGGACAACATTCCCAAACTGCTGAACTGCCTCCGTGACTGTAACGTTGCCATCCGCTGGCTGATGCTGCACACTGCCGAGTCCGcTTATGATCCAAACAACAAGAGACTGCGCCAGATCAAGGAGCAAGTCATCAATGACTCCAAATACAATCCCAAAATActgtttcagctgctgctggacACGGCACAGTTTGAGTTCATACTCAAAGAGATGTTCAAGCAGATGTTGGCAGAGAAGCAGCTGAAATGGGAGAGCTACAAGAAAGAGGGATCAGAGAGGATGATGGAGCTGGCCGAGGTGTTTTCTGGGGTCAAACCTCTCACCAGGGTGGAGAAAAACGAGAATCTTCAGGCCTGGTTCAGAGAGATCTCCAAGCAGATCGAGTCCCTGAACTACGAGGATTCAACCGCAGCTGGGAGGAAGACAGTGCAGCTCATTCAGGCTCTGGTGGAGGTCCAAGAGTTTCACCAGCTGGAGTCCAACCTGCAGGTGTGTCAGTTCCTGGCGGACACACGCAAGTTCCTCCACCAGATGATCCGCACCATCAACATCAAAGAGGAAGTGCTCATCACTATGCAGATCGTGGGAGATCTGTCCTATGCGTGGCAGATCATTGACAGcTTCACATCAATAATGCAAGAGAGCATCAGAGCAAACCCCTCCATGGTGACCAAACTCAGAGCCACTTTTCTAAAGCTTGCGTCTGCGCTGGATCTGCCTCTCTTACGGATCAACCAGGTCAACAGTCCAGATCTGCTGAGCGTGTCTCAGTTTTACTCTGGGGAGCTGGTGGCTTATGTCAGAAAGGTTCTGCAGATCATTCCCGAAAGTATGTTCACCTCATTGGCCAAAATCATCAAACTGCAGATCCATGATATTATGGAGGTGCCCACACGTCTGGACAAAGACAAACTGAAGGACTACGCTCAACTCGGCGCCCGTTATGAGGTAGCTAAACTCACTCATGCCATCTCAGTCTTCACTGAAGGGATTCTGATGATGAAGACCACACTCGTCGGCATTATCAAGGTGGATCCGAAGCAGCTTCTGGAGGACGGGATCAGGAAAGAGCTTGTCAAGCGCGTGGCTTATGCTTTGCACAAAGGCCTCATCTTCAACCCCAAAGCCAAACCCAGTGAATTGATGCCAAAGCTGAAGGAAATGGCTGCCACCATGGACGGGTTTTACCGCTCGTTTGAATACATTCAGGATTACGTGAGCATCTACGGCCTGAAGATCTGGCAGGAAGAAGTGTCTCGTATCATCAACTACAACGTAGAGCAGGAGTGCAACAGTTTCCTCCGAACCAAGATCCAAGATTGGCAAAGCGTCTATCAGTCCACACACATTCCCATTCCTAAGTATCCGTCAGTTGACGAATCCGCCACGTTTATTGGACGTCTTTGCAGGGAAATCCTGAGGATCACAGATCCAAAaacGACGTGTTACATTGATCAGCTGAACACCTGGTACGATATGAAGACGCATCAGGAAGTGACCAACAACCGACTCTTCTCGGAGATTCAGGACACGCTGGGAACCTTCGGCCTGAACGGACTCGACCGACTCCTGTGTTTCATGATCGTCAAAGAGCTGCAGAATTTTCTGACAGTCCTTCAGAAGAACATCCTGAAGGACAAAGCTGTGGTCGACGCCTTTAAAGCTCTGCTGTCGGCGGTCAATCCTGTCAAAGGAATTGTGGCAAATTCAAGCAAAGTCTATGTCAACGCTGTGGCCAAAACCCAGAAGATCTGGCCAGCGTATCTGGAAGCCATCATGAAGGTGGGTCAGATGCAGATCCTGAGGCAGCAGATAGCCAACGAACTCAACTACTCCTGCAAATTTGACTCAAAGCACCTCACTGCGGCGCTGGATAATCTCAACAAGTCTCTGCTGTCTGACATCGAAGCTCATTACCAGGATCCATCCCTGCCGTATCCCAAAGAGGACAACACTCTGCTCTACGAGATCACCGCGTACCTGGAGGCCGCTGGGATCCAAAACCCACTTAACAAAATCTACATCACCACGAAGCGCCTGCCTTACTTTCCCATCGTGAACTTCCTGTTCCTCATCGCTCAGCTGCCAAAACTGCAGTACAACAAAAGCCAAGgCATGACGTGCAGGAAGGCTGCAGACCCGGTGGATTGGGCGCCTCTGGTCCTCGGTCTCCTGACGCTGCTCAAACAGTTTCACTCCAGATACACTGAACAGTTCCTGGCTCTGATTGGACAGTTTATTCGCTCCATAATGGAGCAGTGCACCAGTCAAAAGATTCCTGATATGCCTTCAGATGTAGTCGGAGCCTTAATGTTTCTGGAGGACTATGTGCGTTACACTAAACTGCCCAGAAAGgTGGCCGAGGCTCATGTGCCAAGTTTCGTTTTTGATGAGTTCAGGACTGTGCTGTAAATGTGCCTGTGATTTAATGTCAAATCATATTTGATATCATTTGTCTTTCTCTTAAAgcataatgaaattaattagcatttttaacatttcaattttaaaacatgatcATCTTTTGTAGCCGTTACTGATCTGATGTCTGTCTGCCGGTGTAATAAATGCCATATTTTTAGGACTCTTA

Function

NR:

description
WASH complex subunit 5

GO:

id name namespace
GO:0007409 axonogenesis biological_process
GO:0060047 heart contraction biological_process
GO:0071203 WASH complex cellular_component

KEGG:

id description
K18464 RTSC, SPG8; WASH complex subunit strumpellin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261482.1 True 3799 mRNA 0.48 29 20062776 20074718

Neighbor

gene id symbol gene type direction distance location
LOC122360281 LOC107666827,LOC107592432,LOC107719140,LOC107686285,LOC107714336,LOC107556964 coding upstream 1982 20055640 ~ 20060794 (+)
LOC122360280 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding upstream 7364 20045288 ~ 20055412 (+)
psma2a psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697 coding upstream 17984 20041536 ~ 20044792 (+)
zmp:0000000930 zmp:0000000930,LOC107719165,LOC107666769,LOC107592532,LOC107686330,LOC107714340,LOC107556967 coding upstream 26638 20034132 ~ 20036138 (+)
oxr1a oxr1a,LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding upstream 50417 19897786 ~ 20012359 (+)
cldn12 cldn12,LOC107686255 coding downstream 25139 20099857 ~ 20104314 (+)
slc25a40 slc25a40,LOC107666862,LOC107592430 coding downstream 59323 20134041 ~ 20139103 (+)
LOC122360562 LOC107719162,LOC107666880,LOC107592425 coding downstream 84475 20159193 ~ 20166118 (+)
si:dkey-7j14.6 LOC107719161,LOC107666753,LOC107714322,LOC107592973 coding downstream 92077 20166795 ~ 20169252 (+)
si:dkey-7j14.5 si:dkey-7j14.5,LOC107719133,LOC107666850,LOC107592309,LOC107686177,LOC108269355,LOC108436563 coding downstream 95774 20170492 ~ 20175451 (+)
G114589 NA non-coding upstream 22188 20038574 ~ 20040588 (+)
G114585 NA non-coding upstream 33144 20026841 ~ 20029632 (+)
G114582 NA non-coding upstream 44605 20016710 ~ 20018171 (+)
LOC122360959 NA non-coding upstream 52683 20009553 ~ 20010093 (+)
LOC122360931 NA non-coding upstream 342847 19702725 ~ 19719929 (+)
G114593 NA non-coding downstream 5155 20079873 ~ 20082046 (+)
LOC122359979 NA non-coding downstream 160280 20234998 ~ 20242544 (+)
G114707 NA non-coding downstream 338839 20413557 ~ 20413889 (+)
LOC122360972 NA non-coding downstream 339492 20414210 ~ 20422189 (+)
G114813 NA non-coding downstream 511342 20586060 ~ 20586827 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 414970 19643829 ~ 19647806 (+)
G114382 NA other upstream 734013 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 769895 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 779261 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 809730 19197804 ~ 19253046 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 144926 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 192823 20267541 ~ 20304684 (+)
siglec15l NA other downstream 692560 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 1775271 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 1809191 21883909 ~ 21921531 (+)

Expression


Co-expression Network