LOC122360773 (LOC107666789,LOC107600495,LOC107705096)


Basic Information

Item Value
gene id LOC122360773
gene name LOC107666789,LOC107600495,LOC107705096
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18683319 ~ 18684515 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261626.1
atgttttgtctttatttcagGTGCATGACTGATAGCAAGAGCAGCAGGTGGTCCAAATTCATCCAAAGTGGACAAAGAAATGTTGTGCGGTTCTCCTTGGATGCATTTATGTTTCATGGGATGTTGGGAGAGCATCTTTACATGCATTGTGAAATATCCGTCGGAAATTTCAAACCATCATCAAGTGCAAAATCCTGCGCGTACAACCAGCTAACAAAACGATGGGAAGAGTTGTACGGTTCAAATGATGCTTGCCTCTGCTGCGACTCCACGTGTTTGTCGTCTGACCTCTCTGtGTCCAGTAAGGTCATCACCAGTGAGCCCTGGGTCATGGAGTCTGAATTAGAAATTGACAGTGAAGAGCAAACCTCTCCATTCATGACAGAGGAGGTAGGAACAGGTTTTGTTGAAGTAATAACAACACAGACCGCTGAGACTGGACCTCGTCGTGTTGTGGCAGACCCAGCCGCGGTGAAGGAAGTCGATACATTTGTGGAGCCACGCAGAATATTTGAGGAGGTATTTGGAATGGACTAAACAAAAAGGACTGACTAAAAGACTTTTATGATTTACTTTTGAGTTAAATTGCACGTGATTTGTTAAACAATACATGATGCACACTTTTGATAATGTATCACTAAAATATGCACCATATGTCTGTGAGACAATTATGTCTTGGGAATTGCTAATGTAAAGCACATAAAAACTACACTACACTCTAATACACAATGGTTTTTAGCagtgaaaaattattaaatgttattttttgttctcCAAACTAAAAAAGAATATG

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261626.1 True 793 mRNA 0.40 4 18683319 18684515

Neighbor

gene id symbol gene type direction distance location
LOC122360004 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding upstream 9608 18671959 ~ 18673711 (+)
LOC122360632 LOC107672171,LOC107552811,LOC107724789 coding upstream 70847 18608982 ~ 18612472 (+)
ndrg1b ndrg1b coding upstream 86495 18592268 ~ 18596824 (+)
scxb scxb,LOC107714619,LOC107704851,LOC107724780,LOC107672140,LOC107552813,LOC107576100 coding upstream 140682 18539263 ~ 18542637 (+)
fam210ab fam210ab,LOC107587812,LOC107704893,LOC107741733,LOC107723107,LOC107671697,LOC107598002 coding upstream 443994 18232044 ~ 18239325 (+)
LOC122360227 LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding downstream 19888 18704403 ~ 18751686 (+)
LOC122361002 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding downstream 77749 18762264 ~ 18779383 (+)
LOC122360014 apoa2,LOC107728486,LOC107688286,LOC107726689,LOC107592191,LOC107726687,LOC107671415 coding downstream 297574 18982089 ~ 18983105 (+)
LOC122360015 apoa2,LOC107592541,LOC107726689,LOC107688286,LOC107592191,LOC107728486,LOC107726687 coding downstream 300395 18984910 ~ 18986011 (+)
LOC122360019 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 coding downstream 318036 19002551 ~ 19013239 (+)
G114175 NA non-coding upstream 14132 18667845 ~ 18669187 (+)
G114172 NA non-coding upstream 18557 18663828 ~ 18664762 (+)
LOC122360728 NA non-coding upstream 29714 18650773 ~ 18653605 (+)
G114104 NA non-coding upstream 121408 18561280 ~ 18561911 (+)
G114103 NA non-coding upstream 122350 18560214 ~ 18560969 (+)
G114132 NA non-coding downstream 82103 18766618 ~ 18888286 (+)
LOC122360693 NA non-coding downstream 137002 18821517 ~ 18825388 (+)
G114299 NA non-coding downstream 293036 18977551 ~ 18979872 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding downstream 384087 19068602 ~ 19112727 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding downstream 411215 19095730 ~ 19156067 (+)
LOC122360853 LOC107700173,LOC107717447,LOC107551678,LOC107723400,LOC107582047,LOC107671182 other upstream 3226 18675560 ~ 18680093 (+)
ensab ensab,LOC107587831,LOC107741750,LOC107663348,LOC107597988,LOC107732479,LOC107689847,LOC108441925,LOC108268136 other upstream 835909 17841802 ~ 17847410 (+)
mettl25b rrnad1,LOC107689858,LOC107549245,LOC107587879 other upstream 945837 17732604 ~ 17737482 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other upstream 1276123 17400284 ~ 17407196 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other upstream 1771438 16900668 ~ 16911881 (+)
LOC122359904 psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697,LOC107653859,LOC107556413 other downstream 73790 18758305 ~ 18761771 (+)
LOC122360692 NA other downstream 124229 18808744 ~ 18821136 (+)
LOC122360132 NA other downstream 142739 18827254 ~ 18841584 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other downstream 513289 19197804 ~ 19253046 (+)
fxyd11 NA other downstream 595868 19280383 ~ 19283515 (+)

Expression


Co-expression Network