LOC122360969


Basic Information

Item Value
gene id LOC122360969
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19323031 ~ 19325543 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261835.1
TGTTGTAATGGGTAAATGTAATACAATGCTGACAGAAGGTAtgatcaaaaatgttaaaagagtTTGATTCACAGGTCCCAAAAATATGCTAAGGTTtgattattatgtattttatcaaAGTAAATGTCAAATAACAACGTGGCACCTGCAGTCATATAGTATGATGGAAACAACTTCTTGTCACGCCTCCCCTACGACCTACAACTCCCATTTGCTGACTGCTTCTTCAGAACAGAAAAGATCTAACCAGAGCACAAGGCAAAgagaaaattacaattaaaacctAACAATTGCACGAATGGATCCCAGCCAGTCTGTCAATCAGCCTCCAGGAGCCTTCGATTTATCTGATAAATCAGTAATGCCTACAGTACCACCACCAATATACCAGGACAATCCTGCTGGATATCCTCCTTCCTTTCCAAACCAGCCGGTCCCCCAGGGCCCCTACACCCAGGGGCCATATCCAGGACAAACTGTGGTTGCTTCACAGCCTGCAGTTTTTGTGACCCCTTCTCCGATGACCAATCTGGTTCCAGATTACCTGGGTTACTCCATCTTCACCATGCTGTGCTGCTGTTTACCTCTAGGCATTGCTGCAGTGGTTTACTCCTGCTCTACTCGAGATGCCAACTACTCAGGACAGCGACAATTGGCAGAAAAGAACTCCAAAATAGCACGCACCCTGAACCACATCGGCCTTGGTATTGGCCTCActgtcattataataataattatcaccCAGGCTTTGAACAGATAAAAGCTGATGCAGAATCcaaacagatttgtttttctgtatttgaaaTGTTGCTTGTTCAATTTACCTTTATTCTCATATGTTTAAGGTGTATTATTGTGtgtgaaacaaagaaaaaataaacataaaattatcatctttttttacaatacaatacaaaattttatattataggtACATGTATGTACAAATCTATCTAGCTGCTTTTGTAAGTTGCGTGTAAGTCATATATGGTGGCTGGTTAAACAGGTAAaccacatttttctttctgccGCTGCAACACATTCGATAATGTTAAGGCTTtgtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261835.1 True 1066 mRNA 0.40 2 19323031 19325543

Neighbor

gene id symbol gene type direction distance location
LOC122360047 LOC107666749,LOC107686570 coding upstream 11284 19309372 ~ 19311747 (+)
LOC122360927 LOC107666765,LOC107728460 coding upstream 15531 19305509 ~ 19307500 (+)
LOC122360453 NA coding upstream 26242 19293027 ~ 19296789 (+)
hpn hpn,si:dkey-33i11.3,LOC107728492,LOC107726693 coding upstream 49760 19262614 ~ 19273271 (+)
si:dkey-33i11.1 si:dkey-33i11.1,LOC107666767,LOC107726681,LOC107728459 coding upstream 63428 19251356 ~ 19259603 (+)
LOC122360278 LOC107728464,LOC107666853,LOC107728467,LOC107666779,LOC107686805,LOC107592514,LOC107728451,LOC107666749 coding downstream 16796 19342339 ~ 19348454 (+)
LOC122360279 LOC107666755,LOC107728493 coding downstream 26563 19352106 ~ 19354160 (+)
gapdhs gapdhs,LOC107666830,LOC107577408,LOC107709572,LOC107686531,LOC107728487 coding downstream 44791 19370334 ~ 19382363 (+)
tmem147 tmem147,LOC107666831,LOC106605633,LOC107686556 coding downstream 57818 19383361 ~ 19387604 (+)
sult2st3 LOC107666756,LOC107592535,LOC107686539,LOC107709748,LOC107556976 coding downstream 65244 19390787 ~ 19393501 (+)
G114379 NA non-coding upstream 13817 19308264 ~ 19309214 (+)
G114345 NA non-coding upstream 74711 19245933 ~ 19248320 (+)
G114354 NA non-coding upstream 117067 19202394 ~ 19205964 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding upstream 166964 19095730 ~ 19156067 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding upstream 210304 19068602 ~ 19112727 (+)
G114520 dpys,LOC107728457,LOC107686378,LOC107666745 non-coding downstream 322361 19647904 ~ 19648864 (+)
G114556 NA non-coding downstream 353840 19679383 ~ 19679686 (+)
G114558 NA non-coding downstream 356597 19682140 ~ 19682452 (+)
LOC122360931 NA non-coding downstream 377182 19702725 ~ 19719929 (+)
LOC122360959 NA non-coding downstream 684010 20009553 ~ 20010093 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 30150 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 39516 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 69985 19197804 ~ 19253046 (+)
LOC122360132 NA other upstream 481447 18827254 ~ 18841584 (+)
LOC122360692 NA other upstream 501895 18808744 ~ 18821136 (+)
G114382 NA other downstream 1561 19327104 ~ 19328763 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other downstream 318286 19643829 ~ 19647806 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 894101 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 941998 20267541 ~ 20304684 (+)
siglec15l NA other downstream 1441735 20767278 ~ 20770392 (+)

Expression


Co-expression Network