zmp:0000000930 (zmp:0000000930,LOC107719165,LOC107666769,LOC107592532,LOC107686330,LOC107714340,LOC107556967)


Basic Information

Item Value
gene id zmp:0000000930
gene name zmp:0000000930,LOC107719165,LOC107666769,LOC107592532,LOC107686330,LOC107714340,LOC107556967
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20034132 ~ 20036138 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261879.1
GGAACACTCAGGAGGGAAGCAGCAGCCTTTATCGGAAGATCTGACTGATAACTTTCTTATCCAGGTTTAATTTGGCTTCTATTTTTTGACAGCTCGCTGGATGAGATGCATTGCCTGAGCAGGAAGCCCAGGTCATATCTGCTGAACTCCTACAGTGATTTTCAGGAGACTGATGAGATTACCAGAGAATCATACGAGGCCACCTGGTTAGACCTACTGATGGAGACGAGACCAGAATAcaagaGGACACTTGTCGAGAAGGACTCAATGAGAAAGGAGAGCTATGAAAGCAAGCAGGTGGTCCATTTCACAGTGAGACGATTCCTAAACCAAACCATTCACATGGGCAGAGAGGGGGAGTCACTGCAGGAATATCATCTGCCTTACAGAAACATTCTTCCAATACCAATATTTGTGCCCAGAGATGTCACACAGCCTGACGTTACCCGTGAGCCTTCTCCCCCCAGAATAAAATCCACCATGGACACCGAGACTAGTTTAAACGGTCTTTGCCTTCAGAAGAGAGAGGTCTCGTCCATCACCGACCATAAGCCAATGGTAATCCAACCCAGGAGTCCAGACTTCAGAGCGTCCAGCCTCATCTCTCCCCCACGAGACACACTGGGCATCCAGAGACGAGAGTGATGAGCTGATGAAAGCTGTCTGCTATCATGGACACGGATACATTGACAAGTATGCTGTGTGACCTCATGCATACTTAAATACCAAAGCCTTCAAGAGACCTACATGCTCGCGATGTGTTATCATCTGAGACTGAGAAACCTTATCTAAGGAAGATActacaaaaaagttttgtttaagcATGAAATTAATGCTTAATTAATGCTATTTAACCATATGTTTTATCATTTGAAACATTGTgcttcatgtatttatttacaataaatgccACTGTGTTTGTTAATACAATAACAGGATTCAATTTCTAAATGTGGTTTAAGTGTCCAAATCCTTAATATTTAgtaatggtatatatatatatata

Function

NR:

description
PREDICTED: telethonin-like

GO: NA

KEGG:

id description
K19879 TCAP; telethonin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261879.1 True 1006 mRNA 0.42 2 20034132 20036138

Neighbor

gene id symbol gene type direction distance location
oxr1a oxr1a,LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding upstream 21773 19897786 ~ 20012359 (+)
zfpm2a zfpm2,zfpm2a,LOC107592441,LOC107719156,LOC107556951,LOC107666743,LOC107714317 coding upstream 169038 19726156 ~ 19865094 (+)
rims2a rims2,rims2a,LOC107666746,LOC107728483,LOC108438094,LOC106919946,LOC106962152,LOC107556969,LOC107095553,LOC108256727 coding upstream 390646 19499281 ~ 19643486 (+)
dcaf13 dcaf13 coding upstream 536405 19491155 ~ 19497727 (+)
LOC122360535 LOC107728462,LOC107666770,LOC107592443 coding upstream 546340 19483949 ~ 19487792 (+)
psma2a psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697 coding downstream 5398 20041536 ~ 20044792 (+)
LOC122360280 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding downstream 9150 20045288 ~ 20055412 (+)
LOC122360281 LOC107666827,LOC107592432,LOC107719140,LOC107686285,LOC107714336,LOC107556964 coding downstream 19502 20055640 ~ 20060794 (+)
washc5 kiaa0196,strumpellin,LOC107666741 coding downstream 26638 20062776 ~ 20074718 (+)
cldn12 cldn12,LOC107686255 coding downstream 63719 20099857 ~ 20104314 (+)
G114585 NA non-coding upstream 4500 20026841 ~ 20029632 (+)
G114582 NA non-coding upstream 15961 20016710 ~ 20018171 (+)
LOC122360959 NA non-coding upstream 24039 20009553 ~ 20010093 (+)
LOC122360931 NA non-coding upstream 314203 19702725 ~ 19719929 (+)
G114558 NA non-coding upstream 351680 19682140 ~ 19682452 (+)
G114589 NA non-coding downstream 2436 20038574 ~ 20040588 (+)
G114593 NA non-coding downstream 43735 20079873 ~ 20082046 (+)
LOC122359979 NA non-coding downstream 198860 20234998 ~ 20242544 (+)
G114707 NA non-coding downstream 377419 20413557 ~ 20413889 (+)
LOC122360972 NA non-coding downstream 378072 20414210 ~ 20422189 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 386326 19643829 ~ 19647806 (+)
G114382 NA other upstream 705369 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 741251 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 750617 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 781086 19197804 ~ 19253046 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 183506 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 231403 20267541 ~ 20304684 (+)
siglec15l NA other downstream 731140 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 1813851 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 1847771 21883909 ~ 21921531 (+)

Expression


Co-expression Network