hpn (hpn,si:dkey-33i11.3,LOC107728492,LOC107726693)


Basic Information

Item Value
gene id hpn
gene name hpn,si:dkey-33i11.3,LOC107728492,LOC107726693
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19262614 ~ 19273271 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262056.1
gcagagagagagagagagagagagagagagagagagcgaagcGAGGAGAAGAGCCGTCCCGCGCGCCGGAGAATAGCTTCATTTAACGCACAATAAAAGAGCGAAGGACTCCGGGGAAAGTGAAATGTCAGCGCGAATATCTCGAGGAAACCACTGATTTACTTCTTCGCCTCTTTGTTTCGCGTTCGAGAGTTTATTCAAGAGCCAAAAGGTAAAGGTTTGAAGAAGCAACAAATCGAGGTTTTCAGGAGGAATCATCGGAATCTACTCCGAgcttatttttcagttttttccgTTTCGGATAAAGATGCCAGAGAAGAAGATCGGAAGTCCAGGGATGAGCATCTCCAGCCGGTGTCGGGTGGCCGCTGCGGTAGCTCTGATCTTGGTCATACTGGGCGGGCTCGGAGCCGCCATCTGGGCCCTTGtcacATATCTCAGAACAACAGAAGATACTGGATTATTTGATGTGCAGGTGAGCGCAGCAGACCAGAGACTGCGGGTGTTTGACTCCACCCAGCGGAGGTGGAAACACGTCTGCTCATCCAACGCCAATCAGCTCATCGCCAACATCAGCTGTGAAGAGATGGGCTTTGTCAGAGCAGTGAATTTCTCAGTGACGTGTGCCCCCGATAATGGTGGGGACCGAGAATTTTTCTGCGTAAAAGAGAGTGAGTTAACTTATGGCAAGAAGATAAAAACAGCCCTATATCCTTGTAAATGTGACAAAGGTCAGATACTTGAGGTGATTTGTCAGGACTGTGGCCGCCGTATGCTGCCCGAGGAGCGGATCGTGGGGGGAGTGGATGCTCGGCAGGGTTCGTGGCCGTGGCAGGTCAGCTTACAGTATGATGGAGTTCATCAGTGTGGTGGATCCATCATTTCAGATTCCTGGATCATCAGTGCCGCACACTGCTTTCCTGAGAGGTATCGCCATGTGTCTCGCTGGCGGGTTCTGATGGGATCGATCTACAACACTCCCATCCGTAAGAACATCGTGATCGCTGAAGTGAAGACGGTTGTCTACCACAGCAGCTACCTGCCCTTTGTCGACGCCAACATTGATGACAACAGTCGTGACATAGCGGTCCTGGCTCTGACAAAACCTCTGCAGTTCACCGATTATATCCAGCCGGTGTGTCTTCCTACCTACGGCCAGCGTTTGGCGGATGGGCAGATGGGTACAGTAACCGGCTGGGGTAACGTGGAGTATTACGGCACTCAAGCCAACGTCCTCCAGGAAGCCCACGTGCCCATCATCAGCGATGCAGTGTGCAATGGTCCGGATTATTATGACAACCAGGTCACAACCACCATGTTCTGTGCCGGTTATGAGAAAGGAGGAACTGACTCCTGCCAGGGGGATAGCGGTGGTCCTTTCGTAGCAGCGGACGTCCTGTCTAAGACCAGCCGCTATCGTTTGCTGGGGGTGGTGAGCTGGGGCACGGGCTGTGCCATGGCCAAAAAACCCGGCGTCTACACGCGTGTGTCACGCTTTCTGCCCTGGATATCCACAGCCATGAGGATGTATGAAAACTCCCCAGGAGTGCACAAAATGGCACGGGCGGTCACACCATAGCCGTTCGGAGCGTTTCGAAAATGTTTCATATGAGACTGAAGTGTTGCCTGTTGAGGGCAGATGTGTTGCTCGGGTCAGTGTGAGATCAGACGTCTGGCGTTCTCAGATGTTCTGTGATGATCGACGTGTCCCAAGGACATTATCTCACTCACAGAGGCCAAGAACCATTTCTGATGCTGTACTTTGGGTAAATATGTCTATGAACTTAGCATGTGTTATTAACATAGAATATgccatttttctttgaaaatctaccaaaataataagataataagataatcaaatcaaattatcaATAATGACAGAAGCCAAAaactccatatatatatatatatata
>XM_043262057.1
gcagagagagagagagagagagagagagagagagagcgaagcGAGGAGAAGAGCCGTCCCGCGCGCCGGAGAATAGCTTCATTTAACGCACAATAAAAGAGCGAAGGACTCCGGGGAAAGTGAAATGTCAGCGCGAATATCTCGAGGAAACCACTGATTTACTTCTTCGCCTCTTTGTTTCGCGTTCGAGAGTTTATTCAAGAGCCAAAAGGTTTGAAGAAGCAACAAATCGAGGTTTTCAGGAGGAATCATCGGAATCTACTCCGAgcttatttttcagttttttccgTTTCGGATAAAGATGCCAGAGAAGAAGATCGGAAGTCCAGGGATGAGCATCTCCAGCCGGTGTCGGGTGGCCGCTGCGGTAGCTCTGATCTTGGTCATACTGGGCGGGCTCGGAGCCGCCATCTGGGCCCTTGtcacATATCTCAGAACAACAGAAGATACTGGATTATTTGATGTGCAGGTGAGCGCAGCAGACCAGAGACTGCGGGTGTTTGACTCCACCCAGCGGAGGTGGAAACACGTCTGCTCATCCAACGCCAATCAGCTCATCGCCAACATCAGCTGTGAAGAGATGGGCTTTGTCAGAGCAGTGAATTTCTCAGTGACGTGTGCCCCCGATAATGGTGGGGACCGAGAATTTTTCTGCGTAAAAGAGAGTGAGTTAACTTATGGCAAGAAGATAAAAACAGCCCTATATCCTTGTAAATGTGACAAAGGTCAGATACTTGAGGTGATTTGTCAGGACTGTGGCCGCCGTATGCTGCCCGAGGAGCGGATCGTGGGGGGAGTGGATGCTCGGCAGGGTTCGTGGCCGTGGCAGGTCAGCTTACAGTATGATGGAGTTCATCAGTGTGGTGGATCCATCATTTCAGATTCCTGGATCATCAGTGCCGCACACTGCTTTCCTGAGAGGTATCGCCATGTGTCTCGCTGGCGGGTTCTGATGGGATCGATCTACAACACTCCCATCCGTAAGAACATCGTGATCGCTGAAGTGAAGACGGTTGTCTACCACAGCAGCTACCTGCCCTTTGTCGACGCCAACATTGATGACAACAGTCGTGACATAGCGGTCCTGGCTCTGACAAAACCTCTGCAGTTCACCGATTATATCCAGCCGGTGTGTCTTCCTACCTACGGCCAGCGTTTGGCGGATGGGCAGATGGGTACAGTAACCGGCTGGGGTAACGTGGAGTATTACGGCACTCAAGCCAACGTCCTCCAGGAAGCCCACGTGCCCATCATCAGCGATGCAGTGTGCAATGGTCCGGATTATTATGACAACCAGGTCACAACCACCATGTTCTGTGCCGGTTATGAGAAAGGAGGAACTGACTCCTGCCAGGGGGATAGCGGTGGTCCTTTCGTAGCAGCGGACGTCCTGTCTAAGACCAGCCGCTATCGTTTGCTGGGGGTGGTGAGCTGGGGCACGGGCTGTGCCATGGCCAAAAAACCCGGCGTCTACACGCGTGTGTCACGCTTTCTGCCCTGGATATCCACAGCCATGAGGATGTATGAAAACTCCCCAGGAGTGCACAAAATGGCACGGGCGGTCACACCATAGCCGTTCGGAGCGTTTCGAAAATGTTTCATATGAGACTGAAGTGTTGCCTGTTGAGGGCAGATGTGTTGCTCGGGTCAGTGTGAGATCAGACGTCTGGCGTTCTCAGATGTTCTGTGATGATCGACGTGTCCCAAGGACATTATCTCACTCACAGAGGCCAAGAACCATTTCTGATGCTGTACTTTGGGTAAATATGTCTATGAACTTAGCATGTGTTATTAACATAGAATATgccatttttctttgaaaatctaccaaaataataagataataagataatcaaatcaaattatcaATAATGACAGAAGCCAAAaactccatatatatatatatatata

Function

symbol description
hpn Predicted to enable scavenger receptor activity; serine-type endopeptidase activity; and serine-type exopeptidase activity. Acts upstream of or within blood coagulation, fibrin clot formation and regulation of serine-type endopeptidase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human HPN (hepsin).

NR:

description
PREDICTED: serine protease hepsin

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016021 integral component of membrane cellular_component
GO:0070008 serine-type exopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG:

id description
K08665 HPN; hepsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262056.1 True 1917 mRNA 0.50 13 19262614 19273271
XM_043262057.1 False 1911 mRNA 0.50 13 19262614 19273271

Neighbor

gene id symbol gene type direction distance location
si:dkey-33i11.1 si:dkey-33i11.1,LOC107666767,LOC107726681,LOC107728459 coding upstream 3011 19251356 ~ 19259603 (+)
rgl2 rgl2,LOC107666852,LOC107726673,LOC107665651 coding upstream 21975 19214486 ~ 19240639 (+)
ntrk1 ntrk1,LOC107688245,LOC107592455,LOC107592146,LOC107671431,LOC107728446 coding upstream 209998 19029066 ~ 19052616 (+)
LOC122360019 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 coding upstream 249375 19002551 ~ 19013239 (+)
LOC122360015 apoa2,LOC107592541,LOC107726689,LOC107688286,LOC107592191,LOC107728486,LOC107726687 coding upstream 276603 18984910 ~ 18986011 (+)
LOC122360453 NA coding downstream 19756 19293027 ~ 19296789 (+)
LOC122360927 LOC107666765,LOC107728460 coding downstream 32238 19305509 ~ 19307500 (+)
LOC122360047 LOC107666749,LOC107686570 coding downstream 36101 19309372 ~ 19311747 (+)
LOC122360969 NA coding downstream 49760 19323031 ~ 19325543 (+)
LOC122360278 LOC107728464,LOC107666853,LOC107728467,LOC107666779,LOC107686805,LOC107592514,LOC107728451,LOC107666749 coding downstream 69068 19342339 ~ 19348454 (+)
G114345 NA non-coding upstream 14294 19245933 ~ 19248320 (+)
G114354 NA non-coding upstream 56650 19202394 ~ 19205964 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding upstream 106547 19095730 ~ 19156067 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding upstream 149887 19068602 ~ 19112727 (+)
G114299 NA non-coding upstream 282742 18977551 ~ 18979872 (+)
G114379 NA non-coding downstream 34993 19308264 ~ 19309214 (+)
G114520 dpys,LOC107728457,LOC107686378,LOC107666745 non-coding downstream 374633 19647904 ~ 19648864 (+)
G114556 NA non-coding downstream 406112 19679383 ~ 19679686 (+)
G114558 NA non-coding downstream 408869 19682140 ~ 19682452 (+)
LOC122360931 NA non-coding downstream 429454 19702725 ~ 19719929 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 9568 19197804 ~ 19253046 (+)
G114131 NA other upstream 405184 18648545 ~ 18857430 (+)
LOC122360132 NA other upstream 421030 18827254 ~ 18841584 (+)
LOC122360692 NA other upstream 441478 18808744 ~ 18821136 (+)
LOC122359904 psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697,LOC107653859,LOC107556413 other upstream 500843 18758305 ~ 18761771 (+)
fxyd11 NA other downstream 7112 19280383 ~ 19283515 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other downstream 10490 19283761 ~ 19292881 (+)
G114382 NA other downstream 53833 19327104 ~ 19328763 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other downstream 370558 19643829 ~ 19647806 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 946373 20219644 ~ 20227077 (+)

Expression


Co-expression Network