CI01000001_00400604_00401694


Basic Information

Item Value
gene id CI01000001_00400604_00401694
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 400425 ~ 401924 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_00400604_00401694.mRNA
CTTTAAATAGCAGGTGTCAGAAACTGTCCCTGCATACACACCCCTCAGACACCATCATCATCATCATCGCCATCAGCAACGCAATGTCCACCGCCAGCGCTGAGACGACCGCACAGCTGCCCCCGGCCGCGGGAAGAGTGTTCTTTCAGCCCGGCGTGGGTTGCGCCGGTTCTGGACCGATGCAAAGGGATGACCCGGTGCAGAAAAAGCAAGGCAAAGTGACGGTGAAGTACGACAGAAAGGAGCTGCGGAAGAGACTCATCCTGGAGGAATGGATCATTGAACAGCTGAGCGAACTTTACGACTGTGAGAGAGACAAGAAAGAGAGAAACCGCTAGTTTGACTTGTGAGGCAGAATAACGTCGACCCCGTTAAAAGGATTCTGTGAGTTTTCCAAACTCTGAGTAAAAATAAGGAAATTGATATTTAAATGAGCACATATTCTTGAGCAAAACAGGTCACAAACCCGTTTTAATTTCAGTTTTAATTAAATTAAATACATCTATTTAACATGATATTCACCATTACATTCAAAAATCTGTTTCTCTTAACATTGTCAGATACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_00400604_00401694.mRNA True 568 mRNA 0.45 2 400425 401924

Neighbor

gene id symbol gene type direction distance location
CI01000001_00353909_00354838 NA coding upstream 45587 353909 ~ 354838 (+)
CI01000001_00351249_00352199 NA coding upstream 46903 350551 ~ 353522 (+)
CI01000001_00343451_00343828 NA coding upstream 56026 343451 ~ 344399 (+)
CI01000001_00337674_00339265 NA coding upstream 61075 337281 ~ 339350 (+)
CI01000001_00231916_00237164 NA coding upstream 162885 231155 ~ 237540 (+)
CI01000001_00426295_00431004 IYD coding downstream 24141 426065 ~ 431232 (+)
CI01000001_00433013_00435064 NA coding downstream 31089 433013 ~ 435539 (+)
CI01000001_00436821_00439097 NA coding downstream 34897 436731 ~ 439752 (+)
CI01000001_00440891_00444667 HTR6 coding downstream 38967 440891 ~ 444983 (+)
CI01000001_00483853_00488761 VWA1 coding downstream 81929 483853 ~ 488825 (+)
G12629 NA non-coding upstream 26940 372764 ~ 373485 (+)
G12628 NA non-coding upstream 40208 359969 ~ 360217 (+)
G12618 NA non-coding upstream 40669 358871 ~ 359756 (+)
G12627 NA non-coding upstream 42043 358149 ~ 358382 (+)
G12611 NA non-coding upstream 96973 303147 ~ 303452 (+)
G12648 NA non-coding downstream 12572 414496 ~ 416841 (+)
G12656 NA non-coding downstream 17038 418962 ~ 419235 (+)
G12664 NA non-coding downstream 66178 468102 ~ 468433 (+)
G12674 NA non-coding downstream 102563 504487 ~ 504749 (+)
G12614 NA other upstream 89484 309144 ~ 310941 (+)
G13051 NA other downstream 641789 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1266096 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3214324 3618075 ~ 3621451 (+)
G15794 NA other downstream 4659294 5061218 ~ 5064704 (+)

Expression


Co-expression Network