CI01000001_01199556_01205086


Basic Information

Item Value
gene id CI01000001_01199556_01205086
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1199498 ~ 1205086 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01199556_01205086.mRNA
GTGGAAAAGCTCATCAGTGAGAAACAAAAGGACATGATGCTGAGTTCATCAGTGCGAATGGGTTCACAGGCCATGTCTCATCCACAGTGTCTTGAGGTAATAAGTTTTGAGCCCCACCCTCTCTTAGGACAGATCATAAAACTAACCAATGTCATTTACCAGACCAATGTTGAGAAAAAAGTCCAGAATGGAGAAATGAATGGACATGCAGTCCCGACTCCAGAAGTAACCGAACCTGTGGCTAGCAAAGAAGCAGCAGTGAAGCAAAAGAGTGAAACCCCACCAGTGGTCATCAAAAATGAACCAAAACCACCAGTAAAAGACGAGGTAGACAGCAGTAAACCCAACGGACCTGCACATGTGGAAACAACACCTGAGCAAAAAACGACTGTCACAAAAGATGCAGAACCACCCAAAAAAGCCCCAAAGCCCAGTGAAGATGAGGTGACCAACTTCTTTGGTAAAATGTTCAAAAAGAAGAGCGAACCTGCGAAACCTGCGTCAGAAAGCAAAGATTCAGTCGACGCACATCAGGTCACAGCGGTGGATCTGAAAATTGACGTGCAGCCTGAAAAAGTCTTCATTAATTCAGACCAAAAGGAGATTCTCAAGGAGGTTGCGGAGAAGCTTAAACTGCAACTGGTTGACGCCATTCCCGCACAACACGAAAGCCCAAGCTCATTGACAAAGAACATCTCAATGGAGTCATCAAGCATGAATGTTGAAGCCGAGACATGCTTGGAGGCCCTGCCAGATTTGCACGCTAAACAAGAACCAGTAGCTGTTGCTGAAGAACCACTAAGTGAAGAACCAGTTACAAGAAAAGCCAGTGAGGTACATCTGAAGTCTGAAGAACCACCAGCGGTTGATGCTAAGGTTCCAGAAGATGAAGAACTTAAGGATGCTGAACGGGCCTTGTTAGAAGACAAGGAACTTATTCAAATTGTTGAAAGCATAATATCAGATGAAAGGGAAGAATTAGCATGTGAAAAAATTCCAATGTGTGAAGCTACCAAACATCTGATTGATGAACTTGAACCTATTTCCAAAAAACTGACGAAAGTAGCTGATGAAGCTGATAGTTTTATTGTGCACGGCATGTCTTCAGTTGTAAAATTAGCAGTTGATACTTTCGAGGTCTTGTCTCCTGTTGAGGAACCAGTCGTTGGAACTGAGGAGCCATTGCTAGTTGCTGAAGAAATAGCGGCTATTGTTGAGGAAATCTTGCAGATTACTCAGGAACAAGAAACAGTGAGCCATGCAAATGAAACAGAAGAAGTCCTAAGGAACAATTTCAAGGAGTCATTGGTTGTTGCAGAGGAACCATTAACAACATCTGTGGAGTCAGCGCTGGTTGCTGAAGAAGAAATTTCCCCTGCCGCTTTCGAATTTATCTTAGATGCTAATGGAAAGGCAGCTGTAGATGAGGAAAGTTGGGTTATTATTGAGGAACCGGCTCGACCACTGTACATCTCTGCCCATAGTGGACGTTCAGAAGAACCTGCGCTCACTAAAAGTAAATGTAATTCAGCAGAATCTACTCAAATTCTTTCCCAACTCAAGTCCATTTGCACTAAGGCTTTAGAAGATGCTTCCTATAAGCCGCTCAGTGTAGATGTATGTGCTGATGAAAGCACTATTCACATTACAATTGAGGTTTGCCCGGATGAGTTCACATTTCTGAATAAGGTCAGTTACGACACCGATGTTCTTTCAACGAGAAAGGCACTGCATGGACAAACTCACCGCATGCAATTCACTCAAAATGTAAACGTACTAGCTCCTTTCCTCAAGATGCCTGTCATCGATTAACACACAATTAACATGAACTGTTCCTGAAAGTGCCGTCGAAACTTACTACATCAAAAAA

Function

NR:

description
hypothetical protein cypCar_00020100

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01199556_01205086.mRNA True 1870 mRNA 0.43 4 1199498 1205086

Neighbor

gene id symbol gene type direction distance location
CI01000001_01158947_01164142 ZNF217 coding downstream 34347 1158398 ~ 1165151 (-)
CI01000001_01068423_01079855 NA coding downstream 118881 1067640 ~ 1080617 (-)
CI01000001_01056812_01066005 NA coding downstream 133375 1056452 ~ 1066123 (-)
CI01000001_01033836_01034518 NA coding downstream 164823 1033336 ~ 1034920 (-)
CI01000001_01030701_01030988 NA coding downstream 168334 1030254 ~ 1031164 (-)
CI01000001_01293807_01304836 CBLN4 coding upstream 88612 1293698 ~ 1304836 (-)
CI01000001_01313263_01351961 NA coding upstream 107601 1312687 ~ 1352235 (-)
CI01000001_01368611_01369774 IRX7 coding upstream 163319 1368405 ~ 1369799 (-)
CI01000001_01377825_01378304 NA coding upstream 171706 1376792 ~ 1378304 (-)
CI01000001_01421483_01453330 NA coding upstream 215844 1420930 ~ 1453330 (-)
G13370 NA non-coding downstream 83729 1086803 ~ 1115769 (-)
G13371 NA non-coding downstream 105638 1092516 ~ 1093860 (-)
G13330 NA non-coding downstream 154275 1043661 ~ 1045223 (-)
G13293 NA non-coding downstream 216162 982923 ~ 983336 (-)
G13409 NA non-coding upstream 47039 1252125 ~ 1252348 (-)
G13410 NA non-coding upstream 47909 1252995 ~ 1253293 (-)
G13415 NA non-coding upstream 53438 1258524 ~ 1258893 (-)
G13618 NA non-coding upstream 205801 1410887 ~ 1411156 (-)
G13619 NA non-coding upstream 206358 1411444 ~ 1411651 (-)
CI01000001_00362143_00378213 NA other downstream 802365 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 941981 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1064573 122814 ~ 131380 (-)
G14104 NA other upstream 558583 1763669 ~ 1771468 (-)
G14219 NA other upstream 789124 1994210 ~ 1994898 (-)
G14228 NA other upstream 850888 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 1054303 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 3187228 4392314 ~ 4399804 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021910 zgc:112994 coding NC_007134.7 CM002907.2 38159715 ~ 38182757 (+)