G125470 (LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107557822,LOC107683099)


Basic Information

Item Value
gene id G125470
gene name LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107557822,LOC107683099
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10785905 ~ 10787023 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU185276
CAAAAATACAAGCTGAAAAATCTAGACTGAGACCACAAAAGGAAAGAAGCCAGTAGAGGTGTGATGCATCTTTCTATAAGAGTTCAGGTGTTTTAATGGGTGTGGAATGATGTGTGAAGGAATGAGCTCCTGGATTTTGGCCCACCAATGTGTCTTGGTgctgttcatttactgtatgcCAACAAGCCAAGCCTTTCTTCCCAACTTCTGGTCACGTGTACTAACATTGTCCTGGGATTCATACACACACCAGTACATGACAGAACAAGCTATACTGAACATCACAATGGAAACTCTGAGCAAAAGGATGGAACGTCATCGTGATGTAGATGATGAAGAGCTGtATACTTGGCTTGGTCGAGGTTTTGGCATGCTGTGGGGGAGGTAGCAAGTGCTAACTCTGAAATGGATTTCTTGAGCTCCACATGTTCTGATCCAGTATACCACTTTGACTCTGAGAGAGTGGAAGGAGCCACCCAGATTCTACGAGAGTTATGGAGCCAGACGGTACT

Function

NR:

description
PREDICTED: von Willebrand factor A domain-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185276 True 512 lncRNA 0.45 3 10785905 10787023

Neighbor

gene id symbol gene type direction distance location
LOC122363031 LOC107692742,LOC107738533 coding upstream 24361 10744387 ~ 10761544 (+)
acadl acadl coding upstream 424593 10352575 ~ 10361312 (+)
lysmd2 lysmd2,LOC107746939,LOC107747616,LOC107704265,LOC107588532,LOC107700588,LOC107550629 coding upstream 450152 10328942 ~ 10335753 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding upstream 465257 10297497 ~ 10320648 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding upstream 571419 10209353 ~ 10214486 (+)
vwa7 vwa7,LOC107715138,LOC107679011,LOC107588552,LOC107711113,LOC107692747,LOC107557822 coding downstream 72790 10859813 ~ 10870796 (+)
LOC122362996 si:ch211-132b12.1,si:ch211-132b12.2,zgc:158427,zgc:174946,LOC107715134,LOC107679003,LOC107588539,LOC107572724,LOC107679008,LOC106581333 coding downstream 85292 10872315 ~ 10877836 (+)
LOC122362995 si:ch211-132b12.2,LOC107572724,LOC107679008,LOC107679003,LOC107715134,LOC107588539,LOC106581333 coding downstream 97574 10884597 ~ 10889401 (+)
LOC122362997 si:ch211-132b12.1,zgc:174946,zgc:158427,si:ch211-132b12.6,si:ch211-132b12.3,LOC107715134,LOC107679003,LOC107588539,LOC107572724 coding downstream 102463 10889486 ~ 10897062 (+)
LOC122362532 LOC107711073,LOC107679025,LOC107714437,LOC107566685,LOC107684602,LOC100332250 coding downstream 220567 11007590 ~ 11028729 (+)
LOC122362658 NA non-coding upstream 183059 10601124 ~ 10602846 (+)
G125369 NA non-coding upstream 376305 10409318 ~ 10409600 (+)
LOC122362497 LOC107700584,LOC107746936,LOC107588541 non-coding upstream 377089 10404414 ~ 10408816 (+)
G125367 LOC107588541,LOC107700584,LOC107746936 non-coding upstream 378517 10406970 ~ 10407388 (+)
G125359 NA non-coding upstream 422669 10362931 ~ 10363236 (+)
LOC122363043 NA non-coding downstream 58429 10845452 ~ 10849689 (+)
G125481 LOC107679019,LOC107711015,LOC107714456,LOC107692743,LOC107557844 non-coding downstream 111141 10898164 ~ 10920333 (+)
G125480 rasa2,LOC107566682,LOC107714449,LOC107679023,LOC107679004,LOC107710946,LOC107684605 non-coding downstream 149342 10936365 ~ 11044066 (+)
G125540 NA non-coding downstream 511980 11299003 ~ 11299260 (+)
LOC122362586 NA non-coding downstream 520524 11307547 ~ 11309510 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other upstream 67820 10632477 ~ 10718085 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other upstream 360065 10416013 ~ 10425840 (+)
G125192 NA other upstream 1420417 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 2238182 8544699 ~ 8547723 (+)
G125041 atmin,LOC107719888,LOC107711756,LOC107567294,LOC107667974 other upstream 2248957 8176353 ~ 8536948 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other downstream 37951 10824974 ~ 10837276 (+)
G125496 snrpd2,LOC106612977 other downstream 181062 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 439090 11226113 ~ 11233814 (+)
selenot1b selt1b,LOC107710848,LOC107684611,LOC107557827,LOC108429894 other downstream 447308 11234331 ~ 11237147 (+)
trpc6b trpc6b,trpc6a,LOC107713306,LOC107691992,LOC108429885,LOC108264040 other downstream 543198 11330221 ~ 11345797 (+)

Expression


Co-expression Network