CI01000001_01757774_01758445


Basic Information

Item Value
gene id CI01000001_01757774_01758445
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1757189 ~ 1759443 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01757774_01758445.mRNA
ACACTTTATATCATGTCCACATATATATCGCCATACCACTAAGTCCTAGCAGTAATGCTTAAGAAATTTGTTTGTATTATTATTTATAAGTTTAAGTTATTTTGCAGTATGAGAAATCTGATAAAGGATGACTTCTAATCTAGGCTGTTCTTCTGAATAAAAAAAAGTTCAACAGCATGGTTGCTGCCAGAGAATTAAGGAAATATGTATTTCAGAGAAAAGTAAATCACATTTTTAGGAGATGGATAACAGCCTAAATTGTACCAAATAGAATGTTTCTGATTGCATTGATAAAATAAATGTTCACAGAATACATATAAGTTGGAAAAAGTATCAGTCTGGGAGCCAGTTGGGTAAATATTATGCAGTATATTTTATTTCCTTCCAGTGAATAAAAAAAGTTGTTCCAATAATAGGTAATTGTTTACCAAAACGCTCATTATAGCACTTCCGCTTAGGAAGCGTTGCCACGGAGACGCCAGAGCGTCGGCAACACTAGCGACTGAGGTGAAAATGCCTCCTCACCAGATCTCTTCAACAACGACTGAAAGAAGCAAATAAGATAATAAAGGTACGACACATCTTTTATATTTTACAATATAACGATTATTATAACGAATATTTGATCAACTTTAACCTATAAACAGAACCCTAAATTTAAAGTTATTTGCAAGCTAGTTGGTCAATCAATCAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTATATCTATCTGTCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTAGCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCAGTATGTCTATCTATCAGTGTATCTATCTGTGTGTCTATCCATCTTTCTCTCTATCAGTCGGCCTGTCTATCTATCTGTCCGTCTATCTAATCAGAATTCAATGTCCTCAGGAGACAGGATGCATGTGACCAGGCCCAAGTCTTCTAAGGGGCGCAGCAGACCCATGATGGCTCACACTTCGAGTGTGGAAACACCTCCTCAGCCTTCGTCTCTTTCCCCCCAGCCTCCAGCTGCCAAGGCTAATGACAGGTTAAACCAGTCCCTTCGATCCCGAGCCATTCTGAGACGCAGCAGTCAACCAAGTACAGATATACTGACTGAAATCTTTGACAGACCCCCGGATGAGCCCGTCTCACTCAACAAATACAGGGTTCTGCCATCCATAGAGAAAAAAACTTCCAGCTGTAAGTTCAGTCAAGGTGACAGCAACCATAGGATATGTCAACACTCTTCACGTGTCTACACAAAGGCCCGAACGGATGTGATGTCAGAGGGGACAGGAAGTGAGACAGGTCTAACTCCTCCAGAGGAATCAGGCCTGCTGCTTGCTATCAGAACTCCATGTGGTCAGAGATTCAAGTGCCATTTCCGGCCAACAGACCAGCTCCAGGCGGTGCTATCAGCCGCAGAGGCTGAATTCGGGGAGAGGTTTGACAATTGTATGATTGAGACTATGGATGTACCACGCAGGACTTTTACAAACCTTACAATGACCTTGGCTCAGTGTGGTGTCCTAAACAAATCGGTTTTATGCATTTCCCAAGATGACAGCCACATGGATTTAACTTGAACATTAATGTAGTGCAACTTTTTATGGACACTTATAATACAAAGACAATATTTTGATTTGCTGTCTGAAACCATTTCAAATTATTAATCACATTCCTCATGATTAAATACATGATTTGATGGTAAAATGTTTATATATGACTAAAAAAAATCTGTATAGAACTTTGGGTCATATTCATGTCAAAGTCGACAGGGAAAAATTAGATATTACAAATATCTAGATAAAAGATTATTAGTGCTGTCAAATTGATTAATCTCATCTAACATAAAAGTTTGTTTACATAATATATGTGTATATATATATATTATTATATTTATATATATGTGTGAGTGCAGTGCACACACATTATATATATATATATATATATTTATACACACACACACACACACATATGTAAACAAACGTTTATGTTAGATGAGTAATCAATTTGACAGCACTAAAGAATATATATTATAGGTAAAAAGATTTTATATGTTGCTTAGCGAAAATTAAACTTATTTCTGGGACCATTAAGACTTTTTGAATTGATATCTTGATGATTAGACATTTTCCCCATATATTCTGATTACCACAAATTAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01757774_01758445.mRNA True 2255 mRNA 0.36 1 1757189 1759443

Neighbor

gene id symbol gene type direction distance location
CI01000001_01707363_01743870 VWA5B1 coding downstream 13319 1707089 ~ 1743870 (-)
CI01000001_01637015_01638058 FAM43B coding downstream 119131 1636695 ~ 1638058 (-)
CI01000001_01582644_01584095 NA coding downstream 172749 1582644 ~ 1584440 (-)
CI01000001_01565290_01569360 PINK1 coding downstream 187829 1565290 ~ 1569360 (-)
CI01000001_01555180_01558113 AGMAT coding downstream 199076 1554301 ~ 1558113 (-)
CI01000001_01760676_01761671 CPTP coding upstream 723 1760166 ~ 1761671 (-)
CI01000001_01772744_01773670 NA coding upstream 12888 1772331 ~ 1773670 (-)
CI01000001_01873684_01874535 NA coding upstream 114197 1873640 ~ 1874535 (-)
CI01000001_01902970_01917410 MARCH9 coding upstream 142986 1902429 ~ 1917454 (-)
CI01000001_01932927_01933914 TSPAN31 coding upstream 173178 1932621 ~ 1933914 (-)
G14100 NA non-coding downstream 2198 1754447 ~ 1754991 (-)
G14096 NA non-coding downstream 3958 1749106 ~ 1753231 (-)
G13679 NA non-coding downstream 80296 1676539 ~ 1676893 (-)
G13678 NA non-coding downstream 81111 1675806 ~ 1676078 (-)
G13674 NA non-coding downstream 90130 1666424 ~ 1667059 (-)
G14104 NA non-coding upstream 8513 1763669 ~ 1771468 (-)
G14112 NA non-coding upstream 108192 1867635 ~ 1871566 (-)
G14257 NA non-coding upstream 134263 1893706 ~ 1896090 (-)
G14259 NA non-coding upstream 161152 1920595 ~ 1920846 (-)
G14261 NA non-coding upstream 162456 1921899 ~ 1922240 (-)
CI01000001_00362143_00378213 NA other downstream 1360056 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1499672 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1622264 122814 ~ 131380 (-)
G14219 NA other upstream 234767 1994210 ~ 1994898 (-)
G14228 NA other upstream 296531 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 499946 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 2632871 4392314 ~ 4399804 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021888 cptp coding NC_007134.7 CM002907.2 37086159 ~ 37094205 (+)