Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000001_01868471_01873459 |
| gene name | UBE2J2, UBE2J2.L |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 1868471 ~ 1873519 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| ube2j2 | Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in protein polyubiquitination and ubiquitin-dependent ERAD pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum and nucleus. Orthologous to human UBE2J2 (ubiquitin conjugating enzyme E2 J2). |
| id | name | namespace |
|---|---|---|
| GO:0006986 | response to unfolded protein | biological_process |
| id | description |
|---|---|
| K04554 | UBE2J2, NCUBE2, UBC6; ubiquitin-conjugating enzyme E2 J2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000001_01868471_01873459.mRNA | True | 840 | mRNA | 0.52 | 6 | 1868471 | 1873519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_01833609_01860272 | CENB5, ACAP3 | coding | upstream | 7518 | 1833261 ~ 1860953 (+) |
| CI01000001_01762809_01771029 | CPSF3L | coding | upstream | 97442 | 1762809 ~ 1771029 (+) |
| CI01000001_01748436_01754956 | DDX19A, DDX19B, RP11-529K1.3 | coding | upstream | 113515 | 1748338 ~ 1754956 (+) |
| CI01000001_01668334_01670035 | CAMK2N1B | coding | upstream | 197446 | 1667762 ~ 1671167 (+) |
| CI01000001_01656726_01659321 | MUL1B, MUL1 | coding | upstream | 209041 | 1656057 ~ 1659430 (+) |
| CI01000001_01878297_01894123 | HIPK1A | coding | downstream | 4778 | 1878297 ~ 1896084 (+) |
| CI01000001_01918301_01923330 | NA | coding | downstream | 44484 | 1918003 ~ 1923379 (+) |
| CI01000001_01955349_01972242 | ZBTB39 | coding | downstream | 81830 | 1955349 ~ 1973010 (+) |
| CI01000001_02009224_02019961 | SPRYD3 | coding | downstream | 133575 | 2007094 ~ 2020191 (+) |
| CI01000001_02084996_02088477 | NA | coding | downstream | 211477 | 2084996 ~ 2089332 (+) |
| G13763 | NA | non-coding | upstream | 88112 | 1780156 ~ 1780359 (+) |
| G13761 | NA | non-coding | upstream | 89714 | 1778385 ~ 1778757 (+) |
| G13697 | NA | non-coding | upstream | 164034 | 1702984 ~ 1704437 (+) |
| G13574 | NA | non-coding | upstream | 185348 | 1682764 ~ 1683123 (+) |
| G13778 | NA | non-coding | downstream | 28752 | 1902271 ~ 1907118 (+) |
| G13721 | NA | non-coding | downstream | 55985 | 1929504 ~ 1933413 (+) |
| G13789 | NA | non-coding | downstream | 65591 | 1939110 ~ 1939319 (+) |
| G13791 | NA | non-coding | downstream | 101444 | 1974963 ~ 1975198 (+) |
| G13726 | NA | non-coding | downstream | 108108 | 1981627 ~ 1983612 (+) |
| G13051 | NA | other | upstream | 823319 | 1043713 ~ 1045152 (+) |
| CI01000001_00483853_00488761 | VWA1 | other | upstream | 1376414 | 483853 ~ 488825 (+) |
| G12614 | NA | other | upstream | 1557530 | 309144 ~ 310941 (+) |
| CI01000001_03618075_03620436 | NA | other | downstream | 1742729 | 3618075 ~ 3621451 (+) |
| G15794 | NA | other | downstream | 3187699 | 5061218 ~ 5064704 (+) |
| CI01000001_05279884_05287123 | NA | other | downstream | 3413230 | 5279837 ~ 5287698 (+) |
| G15995 | NA | other | downstream | 3838366 | 5711885 ~ 5714951 (+) |
| CI01000001_07531945_07539781 | NA | other | downstream | 5659053 | 7531541 ~ 7540586 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
