CI01000001_01918301_01923330


Basic Information

Item Value
gene id CI01000001_01918301_01923330
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1918003 ~ 1923379 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_01918301_01923330.mRNA
GCATAAAAACATAATCCAAAAGAGCTGGAAGTTAGATTCAGGTGCAATCCTATAGTTTTGTTTATTGTTCATCAGAGGCATCATGACGAAGCTTTCACATCATTTCCTTGTGCATCTCCCCATCGACATATTCCAACGCCACCTCCCATCCCAAACACAAACACGGAGCTCAGAAGAATCCATTAGGTTGGTGTCTTAAAAACAACAGTAATAATGGCAGTTTTGGCTGAGGAGCAGAGGGAAATGCCAGCATCTTGTCTCCATTTGAAGTTCATCACCATCCCCCTCCCGGCCCGATATGGTTCCTCGCCACGTTCACGTTCAAAGGAAGATGGAGCTTCCAGAAAGGAAAAATAAAAGGCACCGTGCGCAGATTCGCCTATTTTCCTTCTTCGCAGGATCTACAACTGTGATTTCAAAAGTTCTGATGGGAAAGATTAGTCTTCCTGTTTGTCCGACTGGATCTGTATGCGTGAGGAATCACAATCAGCTCCATCATCTGTCCTCATCAGACTCAGCCAACAAATATCGCATTGGTCATAGCCTTGTGGTCAGACGGGTTTGTGCATATGGACACTCGTGGAAAGGAGGGAGAACTGGCACGTGTCCCAACCTGGAGCCTGAGTGTGCTGACAGGATGGGGGTTCGCTTTGCTGAGCATGACCTAAGTCCTGTTGACCGGAAATTTCAAGGAAACCAGACACCTTACAGTGCACATTTTCCTTACATAAGTGCCCAGCAGCACAGAAAGACAAAAAATAAGCAACGTTACATTACCATTTAAAATATTAGACCAGCTGCATAAATTGTACATTTCGCATCTAATTTAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_01918301_01923330.mRNA True 833 mRNA 0.45 4 1918003 1923379

Neighbor

gene id symbol gene type direction distance location
CI01000001_01878297_01894123 HIPK1A coding upstream 21919 1878297 ~ 1896084 (+)
CI01000001_01868471_01873459 UBE2J2, UBE2J2.L coding upstream 44484 1868471 ~ 1873519 (+)
CI01000001_01833609_01860272 CENB5, ACAP3 coding upstream 57050 1833261 ~ 1860953 (+)
CI01000001_01762809_01771029 CPSF3L coding upstream 146974 1762809 ~ 1771029 (+)
CI01000001_01748436_01754956 DDX19A, DDX19B, RP11-529K1.3 coding upstream 163047 1748338 ~ 1754956 (+)
CI01000001_01955349_01972242 ZBTB39 coding downstream 31970 1955349 ~ 1973010 (+)
CI01000001_02009224_02019961 SPRYD3 coding downstream 83715 2007094 ~ 2020191 (+)
CI01000001_02084996_02088477 NA coding downstream 161617 2084996 ~ 2089332 (+)
CI01000001_02090800_02101722 CSAD coding downstream 167308 2090687 ~ 2101866 (+)
CI01000001_02106280_02114656 ZNF740B, ZNF740 coding downstream 182600 2105979 ~ 2115251 (+)
G13778 NA non-coding upstream 10885 1902271 ~ 1907118 (+)
G13763 NA non-coding upstream 137644 1780156 ~ 1780359 (+)
G13761 NA non-coding upstream 139246 1778385 ~ 1778757 (+)
G13697 NA non-coding upstream 213566 1702984 ~ 1704437 (+)
G13574 NA non-coding upstream 234880 1682764 ~ 1683123 (+)
G13721 NA non-coding downstream 6125 1929504 ~ 1933413 (+)
G13789 NA non-coding downstream 15731 1939110 ~ 1939319 (+)
G13791 NA non-coding downstream 51584 1974963 ~ 1975198 (+)
G13726 NA non-coding downstream 58248 1981627 ~ 1983612 (+)
G13796 NA non-coding downstream 80782 2004161 ~ 2005163 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 246999 1667762 ~ 1671167 (+)
G13051 NA other upstream 872851 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 1425946 483853 ~ 488825 (+)
G12614 NA other upstream 1607062 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 1692869 3618075 ~ 3621451 (+)
G15794 NA other downstream 3137839 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 3363370 5279837 ~ 5287698 (+)
G15995 NA other downstream 3788506 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 5609193 7531541 ~ 7540586 (+)

Expression


Co-expression Network