G127233


Basic Information

Item Value
gene id G127233
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 17794861 ~ 17933819 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU187873
tccattctgtatggatggggtttgggttcctctgtcttctttgttggggacacttaacttctagcgattatcgtcgaattagaccgtctctgcatttaataacaaattgttcactctggtcattatacatccctgtctttatactgtacagtgctttgatgcgacctgtgttgttaaaagcgctatataaataaaaatgattgattgattgattgatagagaTGCAGTTTCCGTATCTGATCAGCGTTTATTTTCAAACACGTCACCCACGTGACAGAAGCCCTTCATCTTCTCCAGGACCCGGTTGACCTCCGGCATCACGTCTTTGCCGTCGACGTTTATGGGAGCGTTCGAGCGGTTCCTCAGAGCCACGTGGAGAACGGCACGGCCCTGcagaacacagaacacacttttgaacacacacacacacacacacact
>TU187874
AAAACCAACATCATAATTACGATAGTTATTCACAGCGAACTAATAAATGAACATTCGGATGAAATACTTAAATAAAGAAtgcaaatatgattttataaaacgtttaaataattgaattgaatttaaaactaagcaataaaatataaatatgattaaaggTGTTTAACGCGAATGaattctgaaataattaaataaagaatgcaaataaaataattaaaataactaattattttCGGATAATTCggacaaaataattaaataaagaatgcaaataaaataattaaaataactaattattttCGGATAATTcggataaaataatttaaaaaagaatgcaaatatgattttataaaacgtttaaataactgaatttaatttaaaactaagcaataaaatattaaatataaatataattatagctGTTTAAAGgcgaatgaataaacaaattagtaaatgtatttaaaaaatggtatttagagtgtatatagtatagtatggagtgtttatagtattaatatattttagggtgtaaaaataaataagtaaaccACATAGATGCTGTTAAGTATTAGAAAGAGTGTGCCTTgcacaatgataaaaaaaataaaataaataaagacgtAACTAAAACAAAGGACAGAGATCATCGGTGTATGCTAAATTACTATTTCAgtctatttcaaaatgtttttttttattttaatttcagtttttcagtctTAAATATATCAGACAAGTAAAAAATACCCCCTCAAATAGTAGATTTCTACTATTAGAAATACAGTGCCAGTTGTGACTTTTACTAGCAAAAAAACAGTCTGACCAGCACATCCCTAAGACCCCTGATCCGACGacaggagaaaagaaaaaccatTTGCTGCTTTGATTTCACGAACCAGATCGGATCCACCGATGCCGACATTAACCACATCCGTGATGGGTTTCCCCGTGTATCCCTTCCACTCTCCGCTGCGGACTTTCTGTggagggcacacacacacacacacacacacacacacacactaagtcagtttaaaactgaactggaagctaagtgctgggcgtctggtcagaggagaactggccccgactgagtctggtttctcccaagggttttttttctccattctgtatggatggggtttgggttcctctggcttgctttgtcggggacacttaacttctagcgattatcatcgaattagaccgtctctgcatttaataacaaattgttcactctggtcattatacatcccttgtATTCTTcaactttatactgtacagtgctttgatgcgacctgtgttgttaaaagcgctatataaataaaaatgattgattgattgattgatagagaTGCAGTTTCCGTATCTGATCAGCGTTTATTTTCAAACACGTCACCCACGTGACAGAAGCCCTTCATCTTCTCCAGGACCCGGTTGACCTCCGGCATCACGTCTTTGCCGTCGACGTTTATGGGAGCGTTCGAGCGGTTCCTCAGAGCCACGTGGAGAACGGCACGGCCCTGcagaacacagaacacacttttgaacacacacacacacacacacact
>TU187875
AAAACCAACATCATAATTACGATAGTTATTCACAGCGAACTAATAAATGAACATTCGGATGAAATACTTAAATAAAGAAtgcaaatatgattttataAAACGtttaaataactgaatttaatttaaaactaagcaataaaatattaaatataaatataattacagctGTTTAAAGgcgaatgaataaacaaattagtaaatgtatttaaaaaatggtatttagagtgtatatagtatagtatggagtgtttatagtattaatatattttagggtgtaaaaataaataagtaaaccACATAGATGCTGTTAAGTATTAGAAAGAGTGTGCCTTgcacaatgataaaaaaaataaaataaataaagacgtAACTAAAACAAAGGACAGAGATCATCGGTGTATGCTAAATTACTATTTCAgtctatttcaaaatgtttttttttattttaatttcagtttttcagtctTAAATATATCAGACAAGTAAAAAATACCCCCTCAAATAGTAGATTTCTACTATTAGAAATACAGTGCCAGTTGTGACTTTTACTAGCAAAAAAACAGTCTGACCAGCACATCCCTAAGACCCCTGATCCGACGacaggagaaaagaaaaaccatTTGCTGCTTTGATTTCACGAACCAGATCGGATCCACCGATGCCGACATTAACCACATCCGTGATGGGTTTCCCCGTGTATCCCTTCCACTCTCCGCTGCGGACTTTCTGTggagggcacacacacacacacacacacacacacacacactaagtcagtttaaaactgaactggaagctaagtgctgggcgtctggtcagaggagaactggccccgactgagtctggtttctcccaagggttttttttctccattctgtatggatggggtttgggttcctctggcttgctttgtcggggacacttaacttctagcgattatcatcgaattagaccgtctctgcatttaataacaaattgttcactctggtcattatacatcccttgtATTCTTcaactttatactgtacagtgctttgatgcgacctgtgttgttaaaagcgctatataaataaaaatgattgattgattgattgatagagaTGCAGTTTCCGTATCTGATCAGCGTTTATTTTCAAACACGTCACCCACGTGACAGAAGCCCTTCATCTTCTCCAGGACCCGGTTGACCTCCGGCATCACGTCTTTGCCGTCGACGTTTATGGGAGCGTTCGAGCGGTTCCTCAGAGCCACGTGGAGAACGGCACGGCCCTGcagaacacagaacacacttttgaacacacacacacacacacacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187873 False 439 lncRNA 0.45 2 17794861 17933819
TU187874 True 1572 lncRNA 0.34 2 17929468 17933819
TU187875 False 1318 lncRNA 0.38 2 17929468 17933819

Neighbor

gene id symbol gene type direction distance location
pigb pigb,LOC107600388,LOC107708293 coding upstream 17884 17769658 ~ 17776977 (+)
LOC122363047 unc13c coding upstream 101627 17555210 ~ 17693234 (+)
LOC122362636 LOC107554234,LOC107665407,LOC107713070 coding upstream 294344 17498529 ~ 17500517 (+)
lrch3 lrch3,LOC107735844 coding upstream 312681 17457090 ~ 17482180 (+)
LOC122322924 NA coding upstream 354796 17437151 ~ 17440065 (+)
LOC122362789 kiaa0355,LOC107594396,LOC107734949,LOC107668468,LOC107600920,LOC107712582 coding downstream 3211 17937030 ~ 17969461 (+)
LOC122362666 LOC107712581,LOC107668485,LOC107734866,LOC107659171 coding downstream 49659 17983478 ~ 18070581 (+)
pepd pepd coding downstream 343545 18277364 ~ 18334482 (+)
ugt5f1 LOC107709391 coding downstream 405324 18339143 ~ 18343857 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding downstream 405380 18339199 ~ 18386930 (+)
G127228 NA non-coding upstream 11158 17782598 ~ 17783703 (+)
G127208 NA non-coding upstream 43610 17750352 ~ 17751251 (+)
G127207 NA non-coding upstream 44685 17749391 ~ 17750176 (+)
G127195 NA non-coding upstream 99268 17695334 ~ 17695593 (+)
LOC122323095 NA non-coding upstream 266931 17521624 ~ 17527930 (+)
G127263 NA non-coding downstream 38731 17972550 ~ 17974502 (+)
G127268 NA non-coding downstream 43856 17977675 ~ 17981341 (+)
G127413 NA non-coding downstream 417921 18351740 ~ 18352103 (+)
G127431 NA non-coding downstream 552038 18485857 ~ 18487271 (+)
G127434 NA non-coding downstream 558178 18491997 ~ 18518461 (+)
serp1 NA other upstream 339204 17454154 ~ 17455657 (+)
G127098 NA other upstream 383268 17410685 ~ 17411593 (+)
LOC122322904 NA other upstream 485703 17303769 ~ 17309158 (+)
LOC122362575 NA other upstream 623526 17129922 ~ 17171335 (+)
G126884 ctxn2 other upstream 717702 17074194 ~ 17077159 (+)
G127292 NA other downstream 204716 18138535 ~ 18140253 (+)
G127456 rps3 other downstream 626144 18559963 ~ 18563152 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other downstream 712543 18646362 ~ 18652164 (+)
G127500 NA other downstream 796871 18730690 ~ 18841535 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 1335792 19269611 ~ 19288556 (+)

Expression


Co-expression Network