G127460


Basic Information

Item Value
gene id G127460
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 18573819 ~ 18574354 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188216
AGTTTTCCGGGGCCGGATCCGTCCGGAGTGAGTCTCAGCGGCTGAGAGAAACCCGGGCTCTCTGGACTCAAGCTGGAATTGTGATATGAACGGCGGCTTTCTGCGGGATAGGCAGCTTGTGTTCTCCGTTGACAGACGGCGAGCGGGGCAGAGACGGAGCGCTGCTGGTCTCGGGGCTCGTGTACGGGCTGCAGGGAGGCTGGTCATACAGCGGCAGAGGAGGAAGTGATGAGTGGAGCCTTTGGCACGGGGACACCTGGAGGCGACAACATGTGTTAGCTTGCTAAGCTAGCCAAGTCTTCAAtccaaaagtttggggtcagcagGTAAAATTAggctacactttattttgactttattcagACATTCAACTAATTACAAGCTACTCTGCAACTACATGCACTTCAGCTAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188216 True 415 lncRNA 0.53 2 18573819 18574354

Neighbor

gene id symbol gene type direction distance location
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding upstream 27512 18544363 ~ 18546307 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding upstream 50255 18519991 ~ 18523564 (+)
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding upstream 113010 18393603 ~ 18460809 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding upstream 186889 18339199 ~ 18386930 (+)
ugt5f1 LOC107709391 coding upstream 229962 18339143 ~ 18343857 (+)
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding downstream 80264 18654618 ~ 18658740 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding downstream 805681 19380035 ~ 19388663 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding downstream 829967 19404321 ~ 19451211 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding downstream 1025658 19600012 ~ 19603818 (+)
LOC122362762 LOC101886557 coding downstream 1049858 19624212 ~ 19625612 (+)
G127439 NA non-coding upstream 27096 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding upstream 45477 18527129 ~ 18528342 (+)
G127434 NA non-coding upstream 55358 18491997 ~ 18518461 (+)
G127431 NA non-coding upstream 86548 18485857 ~ 18487271 (+)
G127413 NA non-coding upstream 221716 18351740 ~ 18352103 (+)
G127492 NA non-coding downstream 116211 18690565 ~ 18693231 (+)
LOC122362700 NA non-coding downstream 755968 19330322 ~ 19348479 (+)
LOC122323165 NA non-coding downstream 878176 19452530 ~ 19480221 (+)
LOC122323166 NA non-coding downstream 913216 19487570 ~ 19568485 (+)
G127617 NA non-coding downstream 1001535 19575889 ~ 19576159 (+)
G127456 rps3 other upstream 10667 18559963 ~ 18563152 (+)
G127292 NA other upstream 433566 18138535 ~ 18140253 (+)
G127258 NA other upstream 645654 17922928 ~ 17928165 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other upstream 686608 17883618 ~ 17887211 (+)
G127239 prtg,prtga,LOC107659194,LOC107574380,LOC107601141 other upstream 759397 17808601 ~ 17814422 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other downstream 72008 18646362 ~ 18652164 (+)
G127500 NA other downstream 156336 18730690 ~ 18841535 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 695257 19269611 ~ 19288556 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 1428650 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 1493324 20067678 ~ 20093601 (+)

Expression


Co-expression Network