G127492


Basic Information

Item Value
gene id G127492
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 18690565 ~ 18693231 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU188255
TTCTGGCATCAGTGAATGTTTAATAACAAAGAAACCCACAGTGACAAAATATGACAACGGTGTGAAATAAGCACGACGACTTACAGGATCCGAGCggcctctcttctcttcttttaaAATACTGGAACAGTTTTAACTTAAACGAGACGGCACATGccaaatgaggaaaaaaaacagacaaaatactTATAAAAATATGCCATTAGATTCATATGAACAATCGTGGACTGTGAGAGCACTATGTACAGAGAAAGGCAATATATaccaatatttacaataaacattGATGACGTCTTTCACTAGAAAGGGCTGAGAGGGTCACTTACAACAGTAAGACTCGACTTAGGACTATCATCACGGATCGATTTAAATatctgattaaaaatgcagaCTCTTGTTTATGAAAATATGACACGCCGAGGATCCCGTCTGCAGTGAGAAGTTATCTTCCGCAACGCTTCGACGTTTCTACCTACGAGTTCTTGGCACTAGCGTCCTACTGCTCAACAGGTCAATTGAAGCATTCCCGGGAATTTCCAAGCGCCTGGGAAACGTCTGACTTCACATCCTTCAGGCGAGCGAGAATTCGGGGCGTgacgcatttttttttcccagacaaACTAAGGCAGCTGCAATTGCTCGTTTAACAGGAAGCGCAGGCGGAGCTCTTCAGGGTTAATTGTCTGTTATAACGGCCGAAGGGCTGCGACCCGTCTGACTTCATTCTAAGCGGCGTAATCtacacactcacaaacaaacacagggTTCATCTCTCCTGTGAACTCTGGATGTCTAATCGGTGAAGAAACAACGCCGTTCCCTTTCCTGAATGATCACGGTCAAAGAAAAGACGCAGCTGTCCGTCGGTGAATCTCTCTAATCCCGACTAGTTATATTACATCACGTGATGAGTTTTTGAttgaataatgacttttttatatatatataaaaggtgaTTGGACACAATTCTGGCTTCAAATtaatatcttgcaattctggcTTTTCAGAACTGCTTAAAGTAAGATTATATTACGGAGTCATAaaatcagaattgtgagaaaactggcaattataagaaaatttgttcttttttccccctcagacTTGAACGTCAGCTTTATATGCTTTAATTGAGAGAAAAATGCCACAATTGTGATTTGCAATTGTTTACATATTAGTTCAACGGTGAAATAGTTCAACGTAGTATTTGTttctattaaatttaataaaaaagcagaaTTAAACCGTAGTACAGCAATGTGATCGTGATTGTTTTAGCGTCACAGTTTTAAGAAGCTAAAGGGAAATAACGACACGGtgcaaaaaaatagtaaatgttCGTAAAAATATGcttgattttctttattttttgggggggggagGATGAAATAAGACCCGGATGTTTCTTTGTGAGATTCACCTGAATAGTTCTCAAAAAACGTACGAATGCGACCTCACTGACCCGACTCGAGTTGAGcgagtggagaaaaaaaaaaaaaatcgaacaaaaaaaccaaaccaaaacaaaaacgcCAGActactttatttataaattaagtgctatataaaaatgattcGATAACCAAAAGAATAAAGTGATAATGTGTGATAACTCTGCCTGTGAGATTGCTGATTATTGAAGTagttaaagtgtgtgtgtcgtATAGCGGTTCGTAGGTGTTCTAGCCTTATATTGCACATTGGTTACGTAAAATTAACTCTCGTTTTGCCCCGAATAACACAAAACGAGAGCTTTAACAAAAAACGTCTTCATTCTCCAACCAAATCACAGTCTGTCAAGACCAGTAGTCGACCGTAAAAGTGTGCAGACTGACAAAGCCGAGGACGAAAAACACTGCATTACCCATAATCCTCCCTGCCTTGCGTGACACATTCCATGTCCCTCCATCCCTGTCTTTTATACTTCAACCTTTTCCCGCTTTTTCTCTTCAAGGTAATGATCATTTTTTGAAGTATCGACACAATATTCAAAAAGCAGCCACAGGACACACCACATGGCGAGCGAGATATTTTACACCGAGAAACGAAGCGACCCGAAACACAACCTGACGGAAAAAACGAACACTCCATCATCGGCTGACGTCTTACACGCTCGTGCACGACGCGTCGGAGAACAGGAAGGGGCGGGGTTTCGGAGGGGGGGGAAGTGCGTGGGCTGGTCCAGCGGCTTGTGCGTGGAGGGGTGGGCGGGGCTTCCGCTACACACGCCACAGCAGTAAGTGGTTGGTGCTGTCGTCCCGCCCCACCGTCTCGCTGCTATTGGTCAGTCTGAAGTCTTCATAGCCGTCTCCTCCGCTGATGACCAGCAGGTTGGATTTGGCGGGCAGGAGGGTGGAGGCGCGCCGGCGGGAGGAGTCTCGTCTCTGCAGGCCTCCGCTGCTGCTCTCTGAGCTGTTCTGTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188255 True 2426 lncRNA 0.43 3 18690565 18693231

Neighbor

gene id symbol gene type direction distance location
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding upstream 31825 18654618 ~ 18658740 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding upstream 144258 18544363 ~ 18546307 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding upstream 167001 18519991 ~ 18523564 (+)
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding upstream 229756 18393603 ~ 18460809 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding upstream 303635 18339199 ~ 18386930 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding downstream 686804 19380035 ~ 19388663 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding downstream 711090 19404321 ~ 19451211 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding downstream 906781 19600012 ~ 19603818 (+)
LOC122362762 LOC101886557 coding downstream 930981 19624212 ~ 19625612 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding downstream 1191903 19885134 ~ 19901478 (+)
G127460 NA non-coding upstream 116211 18573819 ~ 18574354 (+)
G127439 NA non-coding upstream 143842 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding upstream 162223 18527129 ~ 18528342 (+)
G127434 NA non-coding upstream 172104 18491997 ~ 18518461 (+)
G127431 NA non-coding upstream 203294 18485857 ~ 18487271 (+)
LOC122362700 NA non-coding downstream 637091 19330322 ~ 19348479 (+)
LOC122323165 NA non-coding downstream 759299 19452530 ~ 19480221 (+)
LOC122323166 NA non-coding downstream 794339 19487570 ~ 19568485 (+)
G127617 NA non-coding downstream 882658 19575889 ~ 19576159 (+)
G127630 NA non-coding downstream 929782 19623013 ~ 19623282 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 38401 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 127413 18559963 ~ 18563152 (+)
G127292 NA other upstream 550312 18138535 ~ 18140253 (+)
G127258 NA other upstream 762400 17922928 ~ 17928165 (+)
sdr42e1 sdr42e1,LOC107712579,LOC107659233,LOC107736292,LOC107600430,LOC107579813 other upstream 803354 17883618 ~ 17887211 (+)
G127500 NA other downstream 37459 18730690 ~ 18841535 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other downstream 576380 19269611 ~ 19288556 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 1309773 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 1374447 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 1852761 20545992 ~ 20549357 (+)

Expression


Co-expression Network