G128856


Basic Information

Item Value
gene id G128856
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24442373 ~ 24443159 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU190168
AACCAAAGTGCCTTTTCTTCTATATAGGGTTTAACAATGCAATTTGAAAATTATAGGTACACGCCTagatacaaaacatatttacaacatTCACAGATCTCAGTACTCACCCTCCGAGGCCTTGGAACTGCTAGGCTGCTCAGATTTATCCCCTGATCCACCTGGATTACTTTTACCGCTGAGTCAGgcggaaaaagagtcaagaaataATCTGTTATCTCATCGATCACAGAATTTGGGCAACAGGTTGAAGCATGACATTGATATGCAGTTATAGGAAAAACAAGATGAGATGCTGGTACTTACGATATAACTGTGTTGGTTGACACTATGTATTCTACTTCTTTGGTCCAGGGATTTATAAAACTAAACCACTGACTTTGTAAGTTGACAAAAGAGCCATATTTCGTTTTAAACTTATAGCAGTTTGTCTCAATCTTCTCTTTACTCCTCAGCACTGTGAAAAGAAGTGCAAAAATGAAATTGTCATTTACTTACGAACCAGTCCTTCCGATcccttattacattttatatttgacagAAAAATTGTGGCTGAATGTACTGTTGACTTATTTGCATACGATGAAAGTAAATGGGGATCCATGCACTTCCAAAATTACCAAGAGTACAATAGAGCTGTCAATGTGACTAGCTTGACAGACCTTTCATTAGTAGTACTTGTCTCATAGTATAAAAacttataaatgtgtaaaagatgaagaaacaaaaaggtATTAagagtcacatttatttttatatgcatgtaatTACACTCTAAGGTGCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190168 True 787 lncRNA 0.36 1 24442373 24443159

Neighbor

gene id symbol gene type direction distance location
si:dkey-103i16.6 si:dkey-103i16.6,LOC107749280,LOC107664689,LOC107553976,LOC107672161 coding upstream 92216 24338891 ~ 24350157 (+)
si:ch73-62b13.1 si:ch73-62b13.1,LOC107749314,LOC107740436,LOC107672215,LOC107553958,LOC107583921,LOC107664683,LOC108425440 coding upstream 127393 24308176 ~ 24314980 (+)
zgc:153031 zgc:153031,LOC107664682,LOC107583831,LOC107672313,LOC107553959 coding upstream 150914 24287138 ~ 24291459 (+)
cry1b cry1ab,LOC107672239,LOC107553944,LOC107583830 coding upstream 155598 24277282 ~ 24286775 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding upstream 260831 24134413 ~ 24181542 (+)
slc17a8 slc17a8,LOC107553956,LOC107672209,LOC107686235,LOC107583818 coding downstream 17757 24460916 ~ 24472951 (+)
nr1h4 nr1h4,LOC107749275,LOC107686236,LOC107672305,LOC107740216 coding downstream 31078 24474237 ~ 24488921 (+)
LOC122322915 LOC107553937,LOC107749305,LOC107686321,LOC107686322,LOC107553936 coding downstream 50774 24493933 ~ 24502864 (+)
LOC122322916 LOC107749305,LOC107686322,LOC107553937,LOC107686321,LOC107553936 coding downstream 68973 24512132 ~ 24522487 (+)
ube2na ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding downstream 84052 24527211 ~ 24534508 (+)
G128841 NA non-coding upstream 1841 24436038 ~ 24440532 (+)
G128855 NA non-coding upstream 6993 24435074 ~ 24435380 (+)
G128854 NA non-coding upstream 10564 24431168 ~ 24431809 (+)
G128816 NA non-coding upstream 59661 24345200 ~ 24382712 (+)
G128804 NA non-coding upstream 144528 24297609 ~ 24297845 (+)
G128857 arntl2,LOC107749276,LOC107686234 non-coding downstream 1343 24444502 ~ 24445199 (+)
G128859 NA non-coding downstream 15560 24458719 ~ 24458934 (+)
G128863 si:ch211-219a15.3,LOC107553954,LOC107583920,LOC107740237,LOC107672306,LOC105898028 non-coding downstream 81368 24524527 ~ 24525054 (+)
G129038 NA non-coding downstream 221292 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding downstream 224325 24667484 ~ 24669844 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 705525 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2003694 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2030416 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3801314 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3841854 20589684 ~ 20600519 (+)
G128858 NA other downstream 6606 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 140686 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 851584 25294743 ~ 25309740 (+)
mt2 NA other downstream 903233 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1478108 25921267 ~ 26174156 (+)

Expression


Co-expression Network