G128858


Basic Information

Item Value
gene id G128858
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24449765 ~ 24457560 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU190171
GGGTTGTCCATGCTGCCTTTCCGTTTTCTGGGCAGCTCCATGCCTGAGGCCATGCCGGTGGCTGAGGTGGGGGTCATCAAaccagacagagagacagagaggccCTGGGGTTCTTCCTCTAATGCGTCTCCTGCCTGGCTTTTCCCCCGTCGCTCCGTCACCGCCGCCAGCCGCTGTATTCCTCGCCGACATGGCTGGAGCCGGTACGCCGGGGCCCAGGACTCCGATGCTGCATGTGGAGAACGAAGGCGGTGGTAGTTATTTGCAAAgaggggagagaaagaggagaggtGAAGGCGGAGGAGGGGGGGAACGGCGAGGCCTgtataattgatttaatttttttctttacaactAACTCATTTGGGAGGGTGGGCCGAGCGTAAAAACGTGCAAGGAGAGGACACGATGGAATCAGGACAGTGGTTGAAATCCGGGGAAACGCGgaagacgacgacgacgacgcaCAATCTCCTCCTACCATCATCAACACCGCCTTCTCCGCTGTCCGTTCCCTCACGTTACTAACCTAGTAAGTCACGCGATATGTTATGCAAGCCGAGAAAAATGCGGTCACGGATGCGATGGCGGTATGCGGTACTGAACGAGTGCCGGTCAGTCATCTGTTCGATCGCAGCGATGTAATTCGACCATATTGCACTCGGATCTCGCAACCATCATATATATTTAGACCAGGACTGTCTGTTATTTTGACTCATTGgatgaatgtatgtatgtatgtagcaTATTGATGATTTGTTGGGGCGAGTAAATGatattacaagaaaataaaaataaaaaaaatctgacca

Function

GO:

id name namespace
GO:0031503 protein-containing complex localization biological_process

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU190171 True 812 TUCP 0.51 2 24449765 24457560

Neighbor

gene id symbol gene type direction distance location
si:dkey-103i16.6 si:dkey-103i16.6,LOC107749280,LOC107664689,LOC107553976,LOC107672161 coding upstream 99608 24338891 ~ 24350157 (+)
si:ch73-62b13.1 si:ch73-62b13.1,LOC107749314,LOC107740436,LOC107672215,LOC107553958,LOC107583921,LOC107664683,LOC108425440 coding upstream 134785 24308176 ~ 24314980 (+)
zgc:153031 zgc:153031,LOC107664682,LOC107583831,LOC107672313,LOC107553959 coding upstream 158306 24287138 ~ 24291459 (+)
cry1b cry1ab,LOC107672239,LOC107553944,LOC107583830 coding upstream 162990 24277282 ~ 24286775 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding upstream 268223 24134413 ~ 24181542 (+)
slc17a8 slc17a8,LOC107553956,LOC107672209,LOC107686235,LOC107583818 coding downstream 3356 24460916 ~ 24472951 (+)
nr1h4 nr1h4,LOC107749275,LOC107686236,LOC107672305,LOC107740216 coding downstream 16677 24474237 ~ 24488921 (+)
LOC122322915 LOC107553937,LOC107749305,LOC107686321,LOC107686322,LOC107553936 coding downstream 36373 24493933 ~ 24502864 (+)
LOC122322916 LOC107749305,LOC107686322,LOC107553937,LOC107686321,LOC107553936 coding downstream 54572 24512132 ~ 24522487 (+)
ube2na ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding downstream 69651 24527211 ~ 24534508 (+)
LOC122363046 NA non-coding upstream 3665 24433591 ~ 24446100 (+)
G128857 arntl2,LOC107749276,LOC107686234 non-coding upstream 4566 24444502 ~ 24445199 (+)
G128856 NA non-coding upstream 6606 24442373 ~ 24443159 (+)
G128841 NA non-coding upstream 9233 24436038 ~ 24440532 (+)
G128855 NA non-coding upstream 14385 24435074 ~ 24435380 (+)
G128859 NA non-coding downstream 1159 24458719 ~ 24458934 (+)
G128863 si:ch211-219a15.3,LOC107553954,LOC107583920,LOC107740237,LOC107672306,LOC105898028 non-coding downstream 66967 24524527 ~ 24525054 (+)
G129038 NA non-coding downstream 206891 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding downstream 209924 24667484 ~ 24669844 (+)
LOC122362654 NA non-coding downstream 277627 24735187 ~ 24737012 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 712917 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2011086 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2037808 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3808706 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3849246 20589684 ~ 20600519 (+)
LOC122323037 NA other downstream 126285 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 837183 25294743 ~ 25309740 (+)
mt2 NA other downstream 888832 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1463707 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 1494770 25952330 ~ 25962581 (+)

Expression


Co-expression Network