LOC122323037


Basic Information

Item Value
gene id LOC122323037
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24583845 ~ 24588337 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU190455
AGTCGTTCCCGGGTGATCTGAGAACCAGGCTtctggagggagagagagaaaaaaaaagagttaaaccAAACGTACGACGTCTCTGCTGTAGTTTCACGCGGGACGTTCGTCCGCAAAATATCACGCGCAGCAACAGACTCCCGCTCCGTTTGAAGTGAAGTAAGCGTGCTCGGGCTGCGCGGCTTCAGCAGGTATTGTGTGAGGGAGGTCTGCTGCCTTGTCGCCTAAGGTCAATGGAGGTGGAGCGTAGCTGTATTGTGTCGATATATTTGCGAGAGCGCGGTGTTCAGCGATCTCGTGTTTCTTTAGAGAGGTTTTTATTGTGCTGTCAAGAGCCCTTGTGCTGGTCTCTCTGCTTCATCTTTGTACTCAGAGTGTGGAGGGTGAACGTGTGGACATTAATACTCTGGCCAAAATGAcaagattttttcattttaattatgaaATAGGGCAGTATGCAGTAGCCATCAACGTCCCAAAGAATCAGTGTAAGAAAGGTTTCATCCCGTCGAAATCTCCCAATTTCCTGAAAGACGACAAAAAAGCAGAGGTGAAAAATATCATAAGTGCTGATGAAAATCCAGTTTATGTGGGCAACGAGCTCATTGCTGCGGGCGTCCAGAAGAAACCAAATACTGCTCATTCAGAGTATCTGCTGATGAACCCTCCAGATAATTCACCCTTGACAAACTTGCTGAATAAGAGAAATGATGGTTGTGTGGTTTTCTACACATTAAACTCTCCCTGTATGAACACCTGTCTCAGTGGCAAGTACAACATCATAGGAGGgcttaataaattaaaagcataCGGGGGAATTAaagcttttgcttttaaaaacatctggaGTCAGGATCAAACCAGACAAGATGATCTGAAAGAGAAACTTAAGTTGATTGCTAGTCGAGTTCCGCTCTACCGCTGTAATGGAAATGCTTGTACCCTTTGTGGAGAGCCAG
>XM_043216668.1
TGACACCATTAATGGCAGTTTAAAAACAGTTTCTATTTTTATCTTGCTTGGGGTTTTAAAAGGTCTGGTCTAGAACCCGAGTACGTCCTTTTCCTTCTCATCATTTTCATCGCTCTCACAAGCGATTGCCCGTAATATTTAAAGTGCAGTAAAGATTCAGCTAGATAATCCACAACGGACATCATGGTTTTTATTGTGCTGTCAAGAGCCCTTGTGCTGGTCTCTCTGCTTCATCTTTGTACTCAGAGTGTGGAGGGTGAACGTGTGGACATTAATACTCTGGCCAAAATGAcaagattttttcattttaattatgaaATAGGGCAGTATGCAGTAGCCATCAACGTCCCAAAGAATCAGTGTAAGAAAGGTTTCATCCCGTCGAAATCTCCCAATTTCCTGAAAGACGACAAAAAAGCAGAGGTGAAAAATATCATAAGTGCTGATGAAAATCCAGTTTATGTGGGCAACGAGCTCATTGCTGCGGGCGTCCAGAAGAAACCAAATACTGCTCATTCAGAGTATCTGCTGATGAACCCTCCAGATAATTCACCCTTGACAAACTTGCTGAATAAGAGAAATGATGGTTGTGTGGTTTTCTACACATTAAACTCTCCCTGTATGAACACCTGTCTCAGTGGCAAGTACAACATCATAGGAGGgcttaataaattaaaagcataCGGGGGAATTAaagcttttgcttttaaaaacatctggaGTCAGGATCAAACCAGACAAGATGATCTGAAAGAGAAACTTAAGTTGATTGCTAGTCGAGTTCCGCTCTACCGCTGTAATGGAAATGCTTGTACCCTTTGTGGAGAGCCAGGGTCAGACACTGAAATCAATGTGTCTTGTTTAACTAAATaactattcattattattattattttggaatgCTGAGGTACTGATGTTCAATGACTCTTGCTTAATTCATTGTCTTGACTAAAATGTATTCTGTTTTTTCATGCATTGATTCAGATGCGCTCTGCGTTATTAAAATGGCTTTGCTATTGTTTTGGCGATGTTGAATCAATTTATTGATGTTATAACATGTTGGCTCTTTGCATTATATGTTACACAATTagcatgtaaaaacaaaataataaaaaaaaccactA
>XM_043216669.1
TTCAGCAGGTATTGTGTGAGGGAGGTCTGCTGCCTTGTCGCCTAAGGTCAATGGAGGTGGAGCGTAGCTGTATTGTGTCGATATATTTGCGAGAGCGCGGTGTTCAGCGATCTCGTGTTTCTTTAGAGAGGTTTTTATTGTGCTGTCAAGAGCCCTTGTGCTGGTCTCTCTGCTTCATCTTTGTACTCAGAGTGTGGAGGGTGAACGTGTGGACATTAATACTCTGGCCAAAATGAcaagattttttcattttaattatgaaATAGGGCAGTATGCAGTAGCCATCAACGTCCCAAAGAATCAGTGTAAGAAAGGTTTCATCCCGTCGAAATCTCCCAATTTCCTGAAAGACGACAAAAAAGCAGAGGTGAAAAATATCATAAGTGCTGATGAAAATCCAGTTTATGTGGGCAACGAGCTCATTGCTGCGGGCGTCCAGAAGAAACCAAATACTGCTCATTCAGAGTATCTGCTGATGAACCCTCCAGATAATTCACCCTTGACAAACTTGCTGAATAAGAGAAATGATGGTTGTGTGGTTTTCTACACATTAAACTCTCCCTGTATGAACACCTGTCTCAGTGGCAAGTACAACATCATAGGAGGgcttaataaattaaaagcataCGGGGGAATTAaagcttttgcttttaaaaacatctggaGTCAGGATCAAACCAGACAAGATGATCTGAAAGAGAAACTTAAGTTGATTGCTAGTCGAGTTCCGCTCTACCGCTGTAATGGAAATGCTTGTACCCTTTGTGGAGAGCCAGGGTCAGACACTGAAATCAATGTGTCTTGTTTAACTAAATaactattcattattattattattttggaatgCTGAGGTACTGATGTTCAATGACTCTTGCTTAATTCATTGTCTTGACTAAAATGTATTCTGTTTTTTCATGCATTGATTCAGATGCGCTCTGCGTTATTAAAATGGCTTTGCTATTGTTTTGGCGATGTTGAATCAATTTATTGATGTTATAACATGTTGGCTCTTTGCATTATATGTTACACAATTagcatgtaaaaacaaaataataaaaaaaaccactA

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko04640 Hematopoietic cell lineage
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU190455 False 959 TUCP 0.45 3 24583845 24588045
XM_043216668.1 True 1124 mRNA 0.38 3 24586945 24588337
XM_043216669.1 False 1068 mRNA 0.39 3 24584028 24588337

Neighbor

gene id symbol gene type direction distance location
eea1 LOC107686240,LOC107583815,LOC107672259,LOC107740258 coding upstream 13624 24550432 ~ 24570221 (+)
nudt4a LOC107740279,LOC107672310,LOC107553971,LOC107686239 coding upstream 34465 24535296 ~ 24549380 (+)
ube2na ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding upstream 49337 24527211 ~ 24534508 (+)
LOC122322916 LOC107749305,LOC107686322,LOC107553937,LOC107686321,LOC107553936 coding upstream 61358 24512132 ~ 24522487 (+)
LOC122322915 LOC107553937,LOC107749305,LOC107686321,LOC107686322,LOC107553936 coding upstream 80981 24493933 ~ 24502864 (+)
LOC122362645 itpr2,LOC107672258 coding downstream 2566 24590903 ~ 24659950 (+)
LOC122362651 bhlhe41,LOC107686242,LOC107553967,LOC107672284,LOC107730473,LOC107583813,LOC107740304 coding downstream 83465 24671802 ~ 24675849 (+)
LOC122362647 ctsd,LOC107686244,LOC107672285,LOC107740314 coding downstream 89323 24677660 ~ 24683938 (+)
LOC122362646 bhlhe41,LOC107686242,LOC107553967,LOC107730473,LOC107672284,LOC107583813,LOC107740304 coding downstream 150688 24739025 ~ 24741360 (+)
LOC122362648 ctsd,LOC107686244,LOC107672285,LOC107740314 coding downstream 156528 24744865 ~ 24751103 (+)
G128863 si:ch211-219a15.3,LOC107553954,LOC107583920,LOC107740237,LOC107672306,LOC105898028 non-coding upstream 58791 24524527 ~ 24525054 (+)
G128859 NA non-coding upstream 124911 24458719 ~ 24458934 (+)
LOC122363046 NA non-coding upstream 137745 24433591 ~ 24446100 (+)
G128857 arntl2,LOC107749276,LOC107686234 non-coding upstream 138646 24444502 ~ 24445199 (+)
G128856 NA non-coding upstream 140686 24442373 ~ 24443159 (+)
G129038 NA non-coding downstream 76114 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding downstream 79147 24667484 ~ 24669844 (+)
LOC122362654 NA non-coding downstream 146850 24735187 ~ 24737012 (+)
G129115 mgat4c,LOC107553950,LOC107740326,LOC107672194 non-coding downstream 250725 24839062 ~ 24856231 (+)
G129127 NA non-coding downstream 412393 25000730 ~ 25000930 (+)
G128858 NA other upstream 126285 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 846997 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2145166 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2171888 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3942786 20634845 ~ 20641059 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 706406 25294743 ~ 25309740 (+)
mt2 NA other downstream 758055 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1332930 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 1363993 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 1640757 26229094 ~ 26332010 (+)

Expression


Co-expression Network