G129360


Basic Information

Item Value
gene id G129360
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 25662497 ~ 25663585 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191004
AAATGACTCCTGACAAATCtctatgtgcgtgtgtgtgtgtgtgtgtgccacagAGACACAATGACACACTCTCAGTGTGTCTCATTGTGCTCTCTCATGATGTAGATATGCTTGGCtagtctctctctccctgtctctgtctctttctctctctaccgGGTGATTGGGGCCTCTCTCTGCTGCACTCAAGGCTCTAATGAGCTCCTGGGGGGAAATTAGCGCTTGCATAATAAGCAAACCCCactgtttacacaaaaatcatGTTGCGTGTACATCTTTCCTACTctttttctttcgttttttacttttgctttgTCCTTGAGGCATTTCATTCCATGAAAGGGATTTTTAATCCATGTGATTCTTGGCTTCATTTGATGACAGTCTCCATCATcccatatttattttagctgtacCATGCACAAGAGCTGTAaccaaactaaaaataattggATAGAAAGGTTGAAATTgaatcattttttacatttgcataataacaaacacaaaaaaatgaaacggaGATGAACCCTCACCCTTCCCTTCCAACAAGAGTGCAGTGTTCTGACAGGCGACGCTCACCTCAGCACATTATACTGCTATCTCTTCACAATGCGAAATAATGCTGCATTTGAGGGCCCTCTCAAGAAAACTTGCTGCTTCGGTGCTCACCGTTCTGAGGATATGAAGAGGGTGAATAGACAAGTGTTGAGCTGTGAAATGTTAACATAGCACCATAAGAGCCGCAGTGTCCCTGCTGGCCGGCGCCCAGACAGTACAGGCCCGTTTAAAACTACTCATTAGTGTCTGCATGCTTATCATTTGTCTGAGCAGAACTATAGAATGAGAGCTGAGGGGCATGTGGGAAGTGAAGAGGAAAAGaatgtgagaaaaagaaaaatttaactTAGGCTGAGTGATAATTATAGCACGTTGATGTTTAAATGCAACGGATATTTTTAATTGGTGTAGTTATGATTCAAGATCACTATTTACCATTTGTTTGAATGTTACGTATTAAACAGAGGCTACTAACTCTGCAAAGCTTgacataaaattatattcagaAAATGGAACAGTATAAAAGAAAAT

Function

GO: NA

KEGG:

id description
ko04713 Circadian entrainment

RNA

RNA id representative length rna type GC content exon number start site end site
TU191004 True 1089 lncRNA 0.40 1 25662497 25663585

Neighbor

gene id symbol gene type direction distance location
cbln1 cbln1,LOC107549644,LOC107583779,LOC106573707 coding upstream 67 25656644 ~ 25662430 (+)
si:ch211-212o1.2 si:ch211-212o1.2,tmem189,LOC107738740,LOC107740306,LOC107672277,LOC107583780,LOC108264382,LOC106560866 coding upstream 23126 25614213 ~ 25639371 (+)
znf423 si:ch211-216l23.1,LOC107738741,LOC107583782,LOC107740334,LOC107672235,LOC107549642 coding upstream 50369 25471074 ~ 25612128 (+)
si:ch211-216l23.2 LOC107549641,LOC107740307,LOC107583785,LOC107672316 coding upstream 198394 25457998 ~ 25464103 (+)
rspry1 rspry1,LOC107583786,LOC107672266 coding upstream 205210 25445589 ~ 25457287 (+)
n4bp1 n4bp1,LOC107549646,LOC107738738,LOC107743359,LOC107583777 coding downstream 108550 25772135 ~ 25782486 (+)
siah1 siah1,LOC107742888,LOC107549647,LOC106573709 coding downstream 123749 25787334 ~ 25803910 (+)
st3gal2 st3gal2,LOC107742884,LOC107672232,LOC107686287 coding downstream 190856 25854441 ~ 25875732 (+)
trnal-cag_32 NA coding downstream 233838 25897423 ~ 25897505 (+)
LOC122322950 LOC107549654,LOC107576747,LOC107672203,LOC107742895,LOC107686352 coding downstream 233957 25897542 ~ 25902915 (+)
G129270 fam192a non-coding upstream 220056 25440048 ~ 25442441 (+)
G129262 NA non-coding upstream 313459 25348756 ~ 25349038 (+)
G129246 NA non-coding upstream 373960 25288143 ~ 25288537 (+)
G129135 NA non-coding upstream 520638 25063454 ~ 25141859 (+)
LOC122362644 NA non-coding upstream 612892 25034118 ~ 25049605 (+)
G129368 NA non-coding downstream 11486 25675071 ~ 25675310 (+)
G129370 NA non-coding downstream 12972 25676557 ~ 25676861 (+)
G129435 NA non-coding downstream 303431 25967016 ~ 26221023 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding downstream 493322 26156907 ~ 26158502 (+)
G129427 NA non-coding downstream 496440 26160025 ~ 26160419 (+)
mt2 NA other upstream 313903 25346392 ~ 25348594 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other upstream 352757 25294743 ~ 25309740 (+)
LOC122323037 NA other upstream 1074160 24583845 ~ 24588337 (+)
G128858 NA other upstream 1204937 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 1925649 23457100 ~ 23736848 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 257682 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 288745 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 565509 26229094 ~ 26332010 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other downstream 640302 26303887 ~ 26306806 (+)

Expression


Co-expression Network