G129427


Basic Information

Item Value
gene id G129427
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26160025 ~ 26160419 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191110
GTTATCCTAATTGTTAAAGTAAATTTCTGTATGTCctctaatgttatttttacctCTCATTCCCAGTGGCTAAGGAAATGGATAAAAAATGTGATGATGACAGTGAGACATCAAACTGGATTGCAGCAAATACAAAGGAATGTCCAAAATGCCACGTCACCATTGAGAAAGATGGTGGCTGCAACCACATGGTGTGCCGGAACCAGAACTGTAAAGCAGAATTCTGCTGGGTTTGCCTGGGGCCCTGGGAGCCACATGGTTCTGCTTGGTAGGTACAGGTCTTTATAGTCaagtgttatttgttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191110 True 305 lncRNA 0.42 2 26160025 26160419

Neighbor

gene id symbol gene type direction distance location
hacd3 hacd3,LOC107672296,LOC107738726,LOC107583769,LOC107742880,LOC107596982 coding upstream 216077 25940729 ~ 25943948 (+)
arih1 arih1,LOC107742882,LOC107672283,LOC108423892,LOC107549652,LOC107686289 coding upstream 239050 25906919 ~ 25920975 (+)
LOC122322950 LOC107549654,LOC107576747,LOC107672203,LOC107742895,LOC107686352 coding upstream 257110 25897542 ~ 25902915 (+)
trnal-cag_32 NA coding upstream 262520 25897423 ~ 25897505 (+)
st3gal2 st3gal2,LOC107742884,LOC107672232,LOC107686287 coding upstream 284293 25854441 ~ 25875732 (+)
LOC122362626 LOC107672296,LOC107738726,LOC107742880,LOC107686290,LOC107596982,LOC107583769 coding downstream 30585 26191004 ~ 26196388 (+)
LOC122362692 LOC107719968,LOC107671151,LOC101886608 coding downstream 140497 26300916 ~ 26303177 (+)
LOC122323090 LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867 coding downstream 185593 26346012 ~ 26357471 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding upstream 1523 26156907 ~ 26158502 (+)
G129370 NA non-coding upstream 483164 25676557 ~ 25676861 (+)
G129368 NA non-coding upstream 484715 25675071 ~ 25675310 (+)
G129360 NA non-coding upstream 496440 25662497 ~ 25663585 (+)
G129270 fam192a non-coding upstream 717584 25440048 ~ 25442441 (+)
G129446 NA non-coding downstream 52511 26212930 ~ 26213344 (+)
G129455 NA non-coding downstream 171807 26332226 ~ 26335988 (+)
G129491 chkb,LOC107686538,LOC107710386,LOC107559534,LOC107719962,LOC107577700 non-coding downstream 219284 26379703 ~ 26380285 (+)
LOC122323030 LOC107719968,LOC107671151,LOC101886608,LOC108264446 non-coding downstream 247370 26407789 ~ 26408862 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other upstream 197444 25952330 ~ 25962581 (+)
mt2 NA other upstream 811431 25346392 ~ 25348594 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other upstream 850285 25294743 ~ 25309740 (+)
LOC122323037 NA other upstream 1571688 24583845 ~ 24588337 (+)
G128858 NA other upstream 1702465 24449765 ~ 24457560 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 68675 26229094 ~ 26332010 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other downstream 143468 26303887 ~ 26306806 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G80850 NA non-coding CI01000013 null 4826318 ~ 4828164 (+)