G129468 (cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150)


Basic Information

Item Value
gene id G129468
gene name cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26303887 ~ 26306806 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191172
CATTTATGAGGGCCACTATGTAGCAGGTAGTTACAAGAAGCGTAcaggaaaaaaagcaaacactCAGAAAACAGGCAACTCgcaaaataaaggaaaacaaagagggagggagaggagaaAGTTTGAGTACAAGAGGAGATAAATAGTCACTGTGCTACAGAGTACACGAGGAGTCGACTGAAGGGCACAAGAGTGAAGAACGGTTTGCTTCCATAAAGGACATTCCAGCCCAGCTGAAAGAAAATTGTATCTCATTATCCATTGAGTTTCACCTGACTTGCAGTGTTGCAgGCTGTGCTTTAAGCCTGTATAATGGCAGAGGCTCATCAGGCAGTGGCATTTCAGTTCACCGTCACACCTGATGGCATTGACCTACAGTTGAGCCGCGAGGTTCTCAAACACATCTACCTATCTGGAGTGACATCATGGAAGAAACGTGCCATCCGCTTCAAgaatGGTGTTCTCACAGGAGTTTACCCTGCTAGTCCCTCCAGCTGGTTAATTGTAGTTATTGCAATAATGAGCACCATGTATGCCAGGATCGACCCCTCCATGGGCATGATTGACAGGATCAAGACTTCTCTACCTGTGAGCGAGTTTATGACCCTTCAGACTAAGACGGTGTTGAGTGCCATCCTGTTTGCCACAGGCCTGTGGTTATCATTCATCTTTCTGCTGCGGTACATCCTGAAAGCTCTCCTGTCCTATCATGGCTGGATCTTTGAGTCACATGGCAAAATGAGCTTCTTTACTAAAGTCTGGCTGAGTCTTGTAAAGCTGTTGTCTGGCAGACGACCGTTGCTTTACAGCTTCCAGGCATCTCTTCCCCATCTGCCAGTACCGAGTATTGATGNNNNAA

Function

symbol description
cpt1b Predicted to enable carnitine O-palmitoyltransferase activity. Acts upstream of or within response to (R)-carnitine and response to bacterium. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Is expressed in female organism and liver. Orthologous to human CPT1B (carnitine palmitoyltransferase 1B).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191172 True 859 TUCP 0.46 5 26303887 26306806

Neighbor

gene id symbol gene type direction distance location
LOC122362692 LOC107719968,LOC107671151,LOC101886608 coding upstream 710 26300916 ~ 26303177 (+)
LOC122362626 LOC107672296,LOC107738726,LOC107742880,LOC107686290,LOC107596982,LOC107583769 coding upstream 107499 26191004 ~ 26196388 (+)
hacd3 hacd3,LOC107672296,LOC107738726,LOC107583769,LOC107742880,LOC107596982 coding upstream 359939 25940729 ~ 25943948 (+)
arih1 arih1,LOC107742882,LOC107672283,LOC108423892,LOC107549652,LOC107686289 coding upstream 382912 25906919 ~ 25920975 (+)
LOC122322950 LOC107549654,LOC107576747,LOC107672203,LOC107742895,LOC107686352 coding upstream 400972 25897542 ~ 25902915 (+)
LOC122323090 LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867 coding downstream 39206 26346012 ~ 26357471 (+)
G129435 NA non-coding upstream 82864 25967016 ~ 26221023 (+)
G129446 NA non-coding upstream 90543 26212930 ~ 26213344 (+)
G129427 NA non-coding upstream 143468 26160025 ~ 26160419 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding upstream 145385 26156907 ~ 26158502 (+)
G129370 NA non-coding upstream 627026 25676557 ~ 25676861 (+)
G129455 NA non-coding downstream 25420 26332226 ~ 26335988 (+)
G129491 chkb,LOC107686538,LOC107710386,LOC107559534,LOC107719962,LOC107577700 non-coding downstream 72897 26379703 ~ 26380285 (+)
LOC122323030 LOC107719968,LOC107671151,LOC101886608,LOC108264446 non-coding downstream 100983 26407789 ~ 26408862 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other upstream 129731 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other upstream 341306 25952330 ~ 25962581 (+)
mt2 NA other upstream 955293 25346392 ~ 25348594 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other upstream 994147 25294743 ~ 25309740 (+)
LOC122323037 NA other upstream 1715550 24583845 ~ 24588337 (+)

Expression


Co-expression Network