G129491 (chkb,LOC107686538,LOC107710386,LOC107559534,LOC107719962,LOC107577700)


Basic Information

Item Value
gene id G129491
gene name chkb,LOC107686538,LOC107710386,LOC107559534,LOC107719962,LOC107577700
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26379703 ~ 26380285 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191214
attgtattgtattgtatttagcaaaaatacattaaattgatcaaaagtgacagcaaagacaatGTTATTCCtttgagctttctattcattgaatagtcctgaaaataaaaagactgaACCTTGGCCATTAGCTTTCAACTTGAAATCTTTCTCACCTCAGATTCTCCAGTTCTGCAGGAAGATCATACTTCAATAGCTTGTTAAATTTCTTTATGTGTGCTTCACAGACAAATTTAATCGTTTTGACTTGTTCCATATACCTGTCAATGGTTCCAAACAGCCATTTGGGTTCCTTGTTGAATGGCATCTCCATCCCATGGAATCGTGCCACTTTACTGGCTATTTCAGCTGAGATCTCTGGGAACCCTAACTGCTCCGT

Function

symbol description
chkb Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Human ortholog(s) of this gene implicated in intellectual disability; megaconial type congenital muscular dystrophy; muscular dystrophy; narcolepsy; and recurrent hypersomnia. Orthologous to human CHKB (choline kinase beta).

NR:

description
PREDICTED: choline/ethanolamine kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191214 True 379 lncRNA 0.37 2 26379703 26380285

Neighbor

gene id symbol gene type direction distance location
LOC122323090 LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867 coding upstream 22232 26346012 ~ 26357471 (+)
LOC122362692 LOC107719968,LOC107671151,LOC101886608 coding upstream 76526 26300916 ~ 26303177 (+)
LOC122362626 LOC107672296,LOC107738726,LOC107742880,LOC107686290,LOC107596982,LOC107583769 coding upstream 183315 26191004 ~ 26196388 (+)
hacd3 hacd3,LOC107672296,LOC107738726,LOC107583769,LOC107742880,LOC107596982 coding upstream 435755 25940729 ~ 25943948 (+)
arih1 arih1,LOC107742882,LOC107672283,LOC108423892,LOC107549652,LOC107686289 coding upstream 458728 25906919 ~ 25920975 (+)
G129455 NA non-coding upstream 43715 26332226 ~ 26335988 (+)
G129435 NA non-coding upstream 158680 25967016 ~ 26221023 (+)
G129446 NA non-coding upstream 166359 26212930 ~ 26213344 (+)
G129427 NA non-coding upstream 219284 26160025 ~ 26160419 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding upstream 221201 26156907 ~ 26158502 (+)
LOC122323030 LOC107719968,LOC107671151,LOC101886608,LOC108264446 non-coding downstream 27504 26407789 ~ 26408862 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other upstream 47693 26229094 ~ 26332010 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other upstream 72897 26303887 ~ 26306806 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other upstream 205547 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other upstream 417122 25952330 ~ 25962581 (+)
mt2 NA other upstream 1031109 25346392 ~ 25348594 (+)

Expression


Co-expression Network