nts (nts)


Basic Information

Item Value
gene id nts
gene name nts
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24836247 ~ 24840156 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216493.1
CATTCCTCACTTCACTTCTGAGAAAGCCAAGAGAAGACACAGCGAACAGGTTGGATAAGAAACCAAGAAGACAGCATCACGACTTCTGCAGGACAAGCTGCAattttgtttctctgtctcttgtAACGCTCTTACAACTTATCTCTCATATTCTTCCATCCGTTTTCATACCATTTTATGACCTTTAACCTTATGGACTTGGGCCCGGCTTGAATGTGCAGAAAGTGTGGGACTACGAAGAAAATGCAGATGCAGCTGACCTCTGTTATTCTCCTTTTTTTACTGTGTAATGGACTGTGTTCAGaTATAGACCAGGGAAAAAGGGCAATAGAGGAAGAGGTACTGAGAAGTCTCCTCACTTCAAAGgtaaAACAGAGCAAGCACATCGCCCCCCTGTGGCAGCTGCCGCTCCAGGACGTGTGCAGGATGATGGACCGTCTCGGGGAGTCGTGGCAGGAGGCCTGGGGCAGCGAGGAGCAGCAGGGGGAGGCAGACATTCAGGCCGACTATGAGCAGAGGGTTTCAGGTTCCCTCGCCCAAATGCTTGAGGAAATGCATGACCTTCAGAACCTCTGCAGGGTCCTGCAGCCTAGAGAGCTTCAAGACGACCAAGAATATCTGGAGCTGGACCAAAACAGCGACAGTCCACTGAAGAGGAAATCTCCATATATACTTAAAAGGCAACTGCGCACCAATAAATCAAGACGGCCGTACATTTTGAAGAGAAGCGTGTATTACTGATGCTCAAGACCCACCGACggaaagacatttttacattttgtgaataTGTGTCTGTTTTCAATGTTATAGTGTTACAATAGAGATATAGTAATTGTATGTTCTGTTTTGgctaaaattttatttattaatgtgcttCAGAAGTCAATCCCTTCTTCATTATGGGATGGACggtgtaaataaaacagcagtCGATTCAAgagttattatatttatttatttaatgtatatttatttttcttccaatgtaattaaatcatacttattaaaactctttatgaaaaa

Function

symbol description
nts Predicted to enable neuropeptide hormone activity. Predicted to be located in extracellular region and transport vesicle. Is expressed in GABAergic neurons and diencephalon. Orthologous to human NTS (neurotensin).

NR:

description
neurotensin/neuromedin N-like

GO: NA

KEGG:

id description
K05235 NTS; neurotensin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216493.1 True 1023 mRNA 0.43 4 24836247 24840156

Neighbor

gene id symbol gene type direction distance location
alx1 alx1,LOC107672210,LOC107740463 coding upstream 35144 24795815 ~ 24801103 (+)
lrriq1 lrriq1,LOC107672332,LOC107740429,LOC107583887 coding upstream 43148 24769396 ~ 24793099 (+)
LOC122362648 ctsd,LOC107686244,LOC107672285,LOC107740314 coding upstream 85144 24744865 ~ 24751103 (+)
LOC122362646 bhlhe41,LOC107686242,LOC107553967,LOC107730473,LOC107672284,LOC107583813,LOC107740304 coding upstream 94887 24739025 ~ 24741360 (+)
LOC122362647 ctsd,LOC107686244,LOC107672285,LOC107740314 coding upstream 152309 24677660 ~ 24683938 (+)
eif4g2b eif4g2b,LOC107730533,LOC107569652,LOC107672256 coding downstream 150427 24990583 ~ 24999270 (+)
LOC122323238 NA coding downstream 155615 24995771 ~ 24995950 (+)
lyve1b NA coding downstream 165923 25006079 ~ 25008464 (+)
rnf141 rnf141,LOC107686251,LOC107730548,LOC107672299,LOC107740332 coding downstream 169131 25009287 ~ 25013620 (+)
c18h11orf16 LOC107740346,LOC107672206,LOC107686328,LOC107750774,LOC107583884 coding downstream 250039 25090195 ~ 25095673 (+)
LOC122362654 NA non-coding upstream 99235 24735187 ~ 24737012 (+)
G129038 NA non-coding upstream 107268 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding upstream 166403 24667484 ~ 24669844 (+)
G128863 si:ch211-219a15.3,LOC107553954,LOC107583920,LOC107740237,LOC107672306,LOC105898028 non-coding upstream 311193 24524527 ~ 24525054 (+)
G128859 NA non-coding upstream 377313 24458719 ~ 24458934 (+)
G129127 NA non-coding downstream 160574 25000730 ~ 25000930 (+)
G129125 NA non-coding downstream 173594 25013750 ~ 25016984 (+)
LOC122362644 NA non-coding downstream 193962 25034118 ~ 25049605 (+)
G129134 NA non-coding downstream 202932 25043088 ~ 25043820 (+)
G129135 NA non-coding downstream 223298 25063454 ~ 25141859 (+)
LOC122323037 NA other upstream 247910 24583845 ~ 24588337 (+)
G128858 NA other upstream 378687 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 1099399 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2397568 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2424290 22400944 ~ 22411957 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 454587 25294743 ~ 25309740 (+)
mt2 NA other downstream 506236 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1081111 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 1112174 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 1388938 26229094 ~ 26332010 (+)

Expression


Co-expression Network