LOC122323090 (LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867)


Basic Information

Item Value
gene id LOC122323090
gene name LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26346012 ~ 26357471 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216743.1
TGTAAACGCGTCCTGtccatcatcctcctcctcctcctcaccaccaccaccatcatcatcatcatcagtccAGAGAGACCCGCGCTTATTATTAAAGCTCAGGTTCGCTTCACTCATCATCAGCCGGACTTAATGAGTTTGTCAGTGATTAAAGAGCCTGTGTGCTGATGAACCGGGCTGGATCCTGCCTCTTCGCCGCTCTGCCCTTAAAATGGAGTTTGTGGAGAGGAAGCGGAGCAGGAAATCGCAGAGCTTTAAACTGGTGAATGATGCAGATTTTAGCCATGAAATGGATGATGTAGACCAGAATGACACTGAAGGAGATGCTCTGGATGCTTCTGAGACCGAAGTCTGGTTAGGTGATGAAGGGATGGAGATAAAGAAGCAGATAACAGGCATGATGCGCTTGCTGAGCGACAAGACGGGGCGAGTGTACCAGCGGGTGGGACGAGAGGGAGAGACCCTCAAACAGGAGCCTCAGGAGGAGTCTCTCAGCCTGCCTGCGCCTCAGAGCCTGGCCCCTGAACATCCCCAGTACAGCTGGAGCTCCGTCCTGATGACTCATGGGCAGTACGGCACCCGCTCCAAAACACAGAGGATGCTCAACCACTCGAAAGCTAATGACATGGCCTTGCCCCCTGCGCctgctgccatggcaacagagCCCAGCTGCTGCATGTGCAACTGCAAGAGCACCCTGCAGGCCATTCTGCTGGAGTTACGTACCATGAGGAAACTAATCCAAACTCAAAGAGGATCCCAGGACAAACAGGGCTCCCAGGTATCGCTCTCGTCCCGAACCTCCATCTCCAGGAGGAGGAGCCGGAAGAGGAGGCCGGGTCACAGGGTGACAGTTCTGACCACGGCCAGTAAAAGAACCACACCTCCGTCGCCACCTGCTGAGAGCGATGCTGTTCACGAGTGTAATCAATCAAGAGAGGACACGCCCCCAGCAGTGACATCATTTATCCCAGATCCCATTCCCAGTGCCAAGACTCCTCCCTCTCACTACAGCGTCACCAGAGGCCAAAGTACCACAGAGccGGAGGTGCAGTTGGCCGAGGATTATGACGTATTTATTCCTAAAGCACAGTTGGACTCTATCTTACTGAACTACACTCGCTCTGGCAGCCTGCTCTTCAGGAAACTGGTGTGTGCGTTCTTTGATGATACCACGCTGGCAAACTCACTGCCCAACGGCAAGAGGAAGAGAGGTCTGAACGACACCAGGAAAGGACTCGATCAAAACATAGTCGGAGCCATTAAAGTGTTCACAGAAAAGTATTGCACAGCCAATGGAATTGAGAAGCTTCCCGGTCCCAGAGACTGGGTCCAGATTCTGCAAGACCAGATTAAACTTGCCCGTCGACGCTTAAAAAGAGCAGAGACAGCCTCGGACAGCAGTGATATTCAGCACAAAACAGagaaatgTCAGCAAACTGTTGGTAAAGTGGAAACTGTGACGCAAAACGGTGCTGCTTACGAGAGAACAGAATGTCTAGTTGCTATGGACACTGCCTGAGAAGAGATTGTTTTCAACAAAATGCAACCTCCGACCCCCGCGAAGGAGtcgtttttaattgttttttccGTCTAGACTGTAGCACGTATGGAGAGACGGGGCTTTGAAATTCTCACGGTCAGCTGTGCAACACGCAGAAAGTTTCTTTGGAAGAAAGCGGCCGATCGGTTAGCGTTCCAGACAGCTATAGACACACTTTTATAACACAATTGCTCCCATTTGATCGTTTTAAAGTGGGTCGTCCCAGATGTCTAGTCGTCTTCTATGAATATTCGGAAGTGTTTGTAGTTTTTCAGCTTCATCCAAATGCTTCACCAggactgctgagaaaaaaaatgactgtgcCTTTAATTCACTCTGCCATGCCAAGCAACAAACTGATGTCATTTCACGAATTGTGCTGTTTATTGACACTTTCTGGTAAAATACGTGGCATTTTCTATATTATTAGTCATATTCGCTACACATAGTCTTACTAATGTGTTGTTGGTTATATAATCTGGCAGACTGGTTATGTAGACCTGTAACTGTTTGACTTCCTGTGTAAGAGGATTTAGTGTCTATTGAATGTGTAAAAATGAGTGAATATGAACATTGTCCTGCGTCTGTGTAACAAAGGGTTTTTACCTCACGGTTAAATGCTTGAATAACTATTCATGTTAATATCCGGGTTAAAAACAAGTTAAGCTGTTTGGACAGCGTCTGGGGCTTGATTCACGTCTCAGTTTGTAAAAGCAATGCTAAAAACGCACATACGGAAATGCACTTACATTGTACACCTGCCCCATGGACTTCCACTGTAAGTGCATACCTGTACACACAAACTGATGTTTGCTTTCGCGAAGTGAGATACGAGTCAAAGCGAATGCCGTTGATGCTGTTGATAGAGCTTAAtggaaatattcctttaagggcACAGATGTTGTGTCTGTGCCTCCTTTTTAATATACCtgttttaaaaaagatgaaCCTTATGTTTATTAGTGGAAAGTTGTTTGGTCTGAGACGTCAAATAAATATGGCTGTGTCTTACATGGTTGA
>XM_043216744.1
GCGATGTTGTCTGTATTCACCACTGGAGTTTATACCTTGTATCCACATCTTCTGTAATAATCCTCCTCTTCCTTACGTGCGAGATCAGCCCGTTTGAAGTACTTCTTTGAGTCCTGGAGAAACAACAGGAATTTTAGCCATGAAATGGATGATGTAGACCAGAATGACACTGAAGGAGATGCTCTGGATGCTTCTGAGACCGAAGTCTGGTTAGGTGATGAAGGGATGGAGATAAAGAAGCAGATAACAGGCATGATGCGCTTGCTGAGCGACAAGACGGGGCGAGTGTACCAGCGGGTGGGACGAGAGGGAGAGACCCTCAAACAGGAGCCTCAGGAGGAGTCTCTCAGCCTGCCTGCGCCTCAGAGCCTGGCCCCTGAACATCCCCAGTACAGCTGGAGCTCCGTCCTGATGACTCATGGGCAGTACGGCACCCGCTCCAAAACACAGAGGATGCTCAACCACTCGAAAGCTAATGACATGGCCTTGCCCCCTGCGCctgctgccatggcaacagagCCCAGCTGCTGCATGTGCAACTGCAAGAGCACCCTGCAGGCCATTCTGCTGGAGTTACGTACCATGAGGAAACTAATCCAAACTCAAAGAGGATCCCAGGACAAACAGGGCTCCCAGGTATCGCTCTCGTCCCGAACCTCCATCTCCAGGAGGAGGAGCCGGAAGAGGAGGCCGGGTCACAGGGTGACAGTTCTGACCACGGCCAGTAAAAGAACCACACCTCCGTCGCCACCTGCTGAGAGCGATGCTGTTCACGAGTGTAATCAATCAAGAGAGGACACGCCCCCAGCAGTGACATCATTTATCCCAGATCCCATTCCCAGTGCCAAGACTCCTCCCTCTCACTACAGCGTCACCAGAGGCCAAAGTACCACAGAGccGGAGGTGCAGTTGGCCGAGGATTATGACGTATTTATTCCTAAAGCACAGTTGGACTCTATCTTACTGAACTACACTCGCTCTGGCAGCCTGCTCTTCAGGAAACTGGTGTGTGCGTTCTTTGATGATACCACGCTGGCAAACTCACTGCCCAACGGCAAGAGGAAGAGAGGTCTGAACGACACCAGGAAAGGACTCGATCAAAACATAGTCGGAGCCATTAAAGTGTTCACAGAAAAGTATTGCACAGCCAATGGAATTGAGAAGCTTCCCGGTCCCAGAGACTGGGTCCAGATTCTGCAAGACCAGATTAAACTTGCCCGTCGACGCTTAAAAAGAGCAGAGACAGCCTCGGACAGCAGTGATATTCAGCACAAAACAGagaaatgTCAGCAAACTGTTGGTAAAGTGGAAACTGTGACGCAAAACGGTGCTGCTTACGAGAGAACAGAATGTCTAGTTGCTATGGACACTGCCTGAGAAGAGATTGTTTTCAACAAAATGCAACCTCCGACCCCCGCGAAGGAGtcgtttttaattgttttttccGTCTAGACTGTAGCACGTATGGAGAGACGGGGCTTTGAAATTCTCACGGTCAGCTGTGCAACACGCAGAAAGTTTCTTTGGAAGAAAGCGGCCGATCGGTTAGCGTTCCAGACAGCTATAGACACACTTTTATAACACAATTGCTCCCATTTGATCGTTTTAAAGTGGGTCGTCCCAGATGTCTAGTCGTCTTCTATGAATATTCGGAAGTGTTTGTAGTTTTTCAGCTTCATCCAAATGCTTCACCAggactgctgagaaaaaaaatgactgtgcCTTTAATTCACTCTGCCATGCCAAGCAACAAACTGATGTCATTTCACGAATTGTGCTGTTTATTGACACTTTCTGGTAAAATACGTGGCATTTTCTATATTATTAGTCATATTCGCTACACATAGTCTTACTAATGTGTTGTTGGTTATATAATCTGGCAGACTGGTTATGTAGACCTGTAACTGTTTGACTTCCTGTGTAAGAGGATTTAGTGTCTATTGAATGTGTAAAAATGAGTGAATATGAACATTGTCCTGCGTCTGTGTAACAAAGGGTTTTTACCTCACGGTTAAATGCTTGAATAACTATTCATGTTAATATCCGGGTTAAAAACAAGTTAAGCTGTTTGGACAGCGTCTGGGGCTTGATTCACGTCTCAGTTTGTAAAAGCAATGCTAAAAACGCACATACGGAAATGCACTTACATTGTACACCTGCCCCATGGACTTCCACTGTAAGTGCATACCTGTACACACAAACTGATGTTTGCTTTCGCGAAGTGAGATACGAGTCAAAGCGAATGCCGTTGATGCTGTTGATAGAGCTTAAtggaaatattcctttaagggcACAGATGTTGTGTCTGTGCCTCCTTTTTAATATACCtgttttaaaaaagatgaaCCTTATGTTTATTAGTGGAAAGTTGTTTGGTCTGAGACGTCAAATAAATATGGCTGTGTCTTACATGGTTGA

Function

NR:

description
PREDICTED: BEN domain-containing protein 7-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216743.1 True 2563 mRNA 0.47 10 26347172 26357471
XM_043216744.1 False 2418 mRNA 0.47 10 26346012 26357471

Neighbor

gene id symbol gene type direction distance location
LOC122362692 LOC107719968,LOC107671151,LOC101886608 coding upstream 42835 26300916 ~ 26303177 (+)
LOC122362626 LOC107672296,LOC107738726,LOC107742880,LOC107686290,LOC107596982,LOC107583769 coding upstream 149624 26191004 ~ 26196388 (+)
hacd3 hacd3,LOC107672296,LOC107738726,LOC107583769,LOC107742880,LOC107596982 coding upstream 402064 25940729 ~ 25943948 (+)
arih1 arih1,LOC107742882,LOC107672283,LOC108423892,LOC107549652,LOC107686289 coding upstream 425037 25906919 ~ 25920975 (+)
LOC122322950 LOC107549654,LOC107576747,LOC107672203,LOC107742895,LOC107686352 coding upstream 443097 25897542 ~ 25902915 (+)
G129455 NA non-coding upstream 10024 26332226 ~ 26335988 (+)
G129435 NA non-coding upstream 124989 25967016 ~ 26221023 (+)
G129446 NA non-coding upstream 132668 26212930 ~ 26213344 (+)
G129427 NA non-coding upstream 185593 26160025 ~ 26160419 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding upstream 187510 26156907 ~ 26158502 (+)
G129491 chkb,LOC107686538,LOC107710386,LOC107559534,LOC107719962,LOC107577700 non-coding downstream 22232 26379703 ~ 26380285 (+)
LOC122323030 LOC107719968,LOC107671151,LOC101886608,LOC108264446 non-coding downstream 50318 26407789 ~ 26408862 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other upstream 14002 26229094 ~ 26332010 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other upstream 39206 26303887 ~ 26306806 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other upstream 171856 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other upstream 383431 25952330 ~ 25962581 (+)
mt2 NA other upstream 997418 25346392 ~ 25348594 (+)

Expression


Co-expression Network