CI01000001_02679428_02695867


Basic Information

Item Value
gene id CI01000001_02679428_02695867
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2678777 ~ 2697902 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_02679428_02695867.mRNA
AAGACTAATACAGATTAAACACACTTATTACATGGAAACCTTTACACTGAAAGTCAAATGCTTCTTAGCACATAGAGTGTATTATTCACATTCAAAGTATCTAAACACAACGCATTTGTGCCTATTTTTTTAATTTTAGGCACCTTTATTGTACAAACTTACAGATTTCAAATAGTCTCTTTTTCTTATGTAAAGGTTACATTAAAACTGTTGCCCATAACAAAATTTTATGAAAAGTACTTGTTTACAAAGGAGACAACAGTGTCATTGATGAGCTTAAGATGATATGAGACAAAACAAAGAAATGTCAAGGTAAATGTCACTGGAATACTTTTTTTGATATATTATGCAAAATAGTATTTGATTTTGTGTATAAAATGCTAGCTATAAAATTATAATGGGGGTTTTTATTTAAATATTTTATTTAAAAAATGTTTCAAATGTCATTTCCACCACATAATGTTATTAAACAGAATACATCATTTCAGATGATCTGGAAATGTTCATAACTTATATATATATATATATATATATATATGATTTTGTGTATTGCAATTATACTAGTGGGTCAGCAATTTTATTTAGAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACACATATGATAAGAAACACCCATAAAGTGCCCTAAAAAGTATTTGGACACTTAAGTCACACTTCAAATGTATGAATTCAATTGTATTATCACAAAATTTGTTCATAAAATATCAAACCAAGTTTTTTATTTTTTATTTTTTATATCAATCCAAGTTGTGACTGTAAAAAAAAAAAGACATTTAATTGACCCTTCGCAAAGACCCGCCCCCCTTAGTTACTTTTGCTTTGTCGGACAAGCCATGGCGCTGTCACGCCACACAGAGTGAAAAATACATTGCGGAGCAAAGAGGACACTGACAACGCGTCGACATACAAGACAGAGAAGGTTACTTATGATATGAAACAAAGTCCCAGCTTTCAAATTGTGTAATTTTTTTTAAGAAATTCAAACAATTAAAACCGTTTTGTGGCTCTTTAATGTGTCGTAACAGATTGCCGTAGCGCCTCAGCTCAAGTGGCTTGTGAACCGATCATCTCTTCCTACTAGTTAATTTATAGCATCAAATAAACATGAATGAACATGAGAAAGAATGTTGTTTCAAACGCAGAAAGATGTCAGTACACACCATTTTTCAGGTTCAAGTCCACCGAGGTTAACCTAACTCCTGACTGCTTTGTCAGACAAAATGGCGGATTCTGCGTTATGATTGGTTAGATCGCTTGTCAATCAAACTCCCGGCGAAGGGTCAATTGCCATTTTGCAATTAATATATGTATATTGCAATAATTAATTAATATATAATATATTGCAAAAAAATATATATGAAATTAATTCTCTTCTAGTTCACACAGGTGGAAAATGTGTGGTTTTAATTTTTTGCTTAAAAAGTGTGCTTTTTACCACTTTGACTGATAATTTTACATAGTCTACATTTCAAGGGTGGGTTAAAGGGATAGTTCACCCAAAAATGAAAATTCTGACATCATTTACTCACCCTCAACTTGTTCCAAACCTGTATGAATTTTTTTGTTCTACTGAAACACAAAAGAACATAGCCTATTTTGGAAGAATGTTTGTAACCAAGCAAATCTTGCACCCCATTGACTGCTATTCCTGCTATTGAAATCAATGGGGGGCGAGATCTGCTTGGTTACCAACATTCTTTCAAATATCTTCCTTTGTGTTCAGCAGAACAAAGAAATTCATACAGGTTTGGAACAACTTGAGGGTGATGTAATTGATGACAGAATTTTCATTTTTGGGTGAACTATCCCTTTAAGTGTCCAATTTTTGGGACTCGCTAGAGTCTGCTTAGAGTAAATGAAAAACTTCTACACTGACTAAAACGCAGGAGACATATTTGACTGTTCATGATAAGACCTCCTGTCCGGGTGGGAGGGTCTGAGGGGGGCATCGCCCCGCCCACGTTTCCATGACAACTAGTTGATCAGCGGCAATCTGATCCATGATGGGAGGAGCGGCGGTCCAGGTGCTCCAGCCAACCGTGTGCTCAGACGCTCATCAGAAGAAGATAGTGGGCCGGAGGAAAGTGTGCGTGTGGGGTGTTGCGAAGGGCAGGGCGCGATCACAGTCGGCGGATCTTCCTGCGTGGATAATGTTCAAGAAGAGCAAGAGCAAAGTTCTGGTGGATGAAGCGTCAGAGGAGGACGACGTGTCGTGGCATCACGAGCACGCGAGTAAGTCTACAAAGGGATATTTCAGTGAGATCCGCTTCCTTCGGCTGCTAGTCAGTTTGTTCACCCAGATCTTGGATAAAGACTCCGAGGGAACAGAGGAAGTTCTGAGTCCCTCAACAAAGGATTCAAAGTTAAAGAAGGTTAAATCAAAGCGAGAAAAAGGAGACAAGAAGTTGTTTCCATCACAGGACGATGAACACATCTTGCTTACAGGAGTCACTGTCTCTCACAGAAGAGGGTCTGCTAAGAAAAACTGGGAGGACGACAAGAGCAAACCGCACTCAGAAAAAGACAAAGCGCACTGTCTATGGGACAGCATCACCATGACGATGAAGCAAATCACACCTACGAAGAAGATTGATAAGATGGAGGGCTGGGAACCACCTCAGCTGAACGACGGAAAGGAGGAGGAAAAAGAAGAGCCGGAGAAGAAGAGGAGTGACTCGTCCCCACCGTCTCTGTCACTGTCTCTGCCGCATTCTCTGGGTTTGCCGTCCTGGGTTGGTTTGGGTTTGGAGGAGGACTCGTCTCGCTATGCTAGTTTGACTGAGTCACAGACTGGCGGCCCTGCCCAGTGGGCGGCCCGGGCACGAGATAAATTAGCTGCCGTCCGTCGCAGAAGTCCAGCCAGCCTATCAGAAAGCAGTTGGGAGGGGCTTAAATGATTTAGCATTAGCATCTGTTAGAATGGCCACGCCCCCTTGTATACAACTCTAATTGGACAGCCCACCTATGTGAAAAGTAGGACCCTCAGACCAAGAGTGCCTGCTCCCGATGCCTGTCAGTCCCAAATATTTTCATTTTTTTAATTTGATATGAAGTTCTTTTCCAACTTTTGAATGAAGCTCCTTCAGAGAAGTCACTGGATGTACTCACAGTTGGTGTCTGACGTCACTGACGATTTCTAGATTAGTTTTAAAGGTCATAAATGACATTTAAACAGTTTTCACCCAAAAATGAAAATTCTGTCATTATTTATTCACCCTCATGATGTTCCAAACCTCTGTTGAACACGAAAGCAGATATTTTAAAGAAACATTCTTCAAAATATCTTCTTTTGTGTTCAACGGAAGAAACTCATACAGGTTGGAACAACATAAGGGTGAGTAAATGACGACAAAATGTTCATTTTTGGGCGAACTATGCCTTTAAAGGTACAAAACGAAAATCTTGTGATCATTTGTTTACCCTTATGTCATTCCAAACCTGTATTACTTCATTTCTTTCACTGGAACAAAAAAGTAGTTTAGCAAAATGCCCCAAGTAGGCTACTATTGTCCATACAATGAAACTGTAGCTGCTAAAATTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_02679428_02695867.mRNA True 3580 mRNA 0.39 6 2678777 2697902

Neighbor

gene id symbol gene type direction distance location
CI01000001_02641721_02653037 ACP1 coding downstream 25740 2641546 ~ 2653037 (-)
CI01000001_02581454_02591012 CCNT1 coding downstream 87765 2581314 ~ 2591012 (-)
CI01000001_02570315_02577096 PMELB coding downstream 101655 2569989 ~ 2577122 (-)
CI01000001_02547325_02557711 TUBA1C, TUBA1B, TUBA1A, TUBA1D coding downstream 121052 2547195 ~ 2557725 (-)
CI01000001_02510977_02523145 GDAP1L1 coding downstream 155632 2510834 ~ 2523145 (-)
CI01000001_02863703_02865768 NA coding upstream 164860 2862762 ~ 2865768 (-)
CI01000001_03083837_03089846 PLXNA1 coding upstream 385935 3083837 ~ 3090718 (-)
CI01000001_03092786_03156426 NA coding upstream 393646 3091548 ~ 3157420 (-)
CI01000001_03165168_03197970 NA coding upstream 467062 3164964 ~ 3198261 (-)
CI01000001_03213566_03220085 NA coding upstream 515372 3213274 ~ 3220866 (-)
G14458 NA non-coding downstream 16065 2662288 ~ 2662712 (-)
G14445 NA non-coding downstream 54257 2624307 ~ 2624520 (-)
G14214 NA non-coding downstream 205188 2470195 ~ 2473589 (-)
G14344 NA non-coding downstream 275029 2403177 ~ 2403748 (-)
G14194 NA non-coding downstream 279859 2398155 ~ 2398918 (-)
G14383 NA non-coding upstream 60165 2758067 ~ 2839789 (-)
G14492 NA non-coding upstream 189922 2887824 ~ 2888448 (-)
G15007 NA non-coding upstream 617919 3315821 ~ 3316045 (-)
G15037 NA non-coding upstream 628124 3326026 ~ 3326361 (-)
CI01000001_02258523_02262621 NA other downstream 381565 2258442 ~ 2263103 (-)
G14228 NA other downstream 622299 2055974 ~ 2056478 (-)
G14219 NA other downstream 683879 1994210 ~ 1994898 (-)
G14104 NA other downstream 911319 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 2281644 361614 ~ 378213 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1694412 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 1778382 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 1871180 4725927 ~ 4728210 (-)
G15736 NA other upstream 2102999 4800901 ~ 4801395 (-)
G16332 NA other upstream 2252787 4950689 ~ 4957842 (-)

Expression


Co-expression Network