spata2l (LOC107670151,LOC107748780)


Basic Information

Item Value
gene id spata2l
gene name LOC107670151,LOC107748780
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23958161 ~ 23961023 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263938.1
GCTTTCGATCTTGGAAATCACTTTCACTTTAGTTTGTTGGTTTATAAGTAGCATTATAGATAGTTTTAATAGGCTAAACTTCCACATATGTTTAATCACCTGTCAGACTGAATTGAACTTGATGTGGATATATCATCTCTACttttttgattgtttaattttgtagtttttagttcTCTTCACTCGGCTATCCAGAAACTTGCTTGTTTGTGCATCTCTCTTGATGAATTCTGCTTATAAAAAGGACGGTCTCATCACTAGGTACCAGACTAACTTAGAGAGACGAATTGAGAAGGGAGATCGAAGTTTAGTATGCAGGGATGAGGATTTTTGTAAGGAAGTCGAAATGCTCCTTCACAGTGGCAGTGCCCGGAAGATACACAATCTGCATGGATTGGATTCACTGGCAGTGATGGAAAAATCTCTTCCTGCATTTCCCTCTAAAACTGGCCAAATGCGCCTCGAGAAACTTTCCAAGGCCTTTGAAGTGCTGGAGCTTGCGGCATTAAACCTCTACATCTACCCCTGGAGAAGAGAGTACAGACAGGTGAAGATGTTTTCAGGTATGTTCACCCATTTGATCAAACCTGCACTGACACTTCAGCAGGCCAAAGAGCTGTTTGGTTTGCTTGGATACAAGGCTTCAAGTCCTAATGAAGAAGAAGAGTTGGCTCTGAACTCCAAACTCGTTCCTTCTGAATATTTACTCAGTCTTGCTTGTGGCTTCTTTGCTGCCCGGATGGAGTGCCAGCTGCTGCTTTCGGCCTTGGGCTCTGTCGACAGAGATGTGGAGTGGGTTCTACAGCTAGTCAAGGAGAGGCAGGGGGGCCAGAGTCTTCAAGTGGCCTTGGAGAACACCAAGAGAAAGTCAGATCCTGCTAGTGTTTCAGAAGCCATCCTGGCAGGTGACATGGACGCTGAGGTGGATCTGTACACGGAGCAGGCGGATGCTTCTCACATGACATCCGCTTCTGGTTCGCCTTCTCACGCTTCTTATATGACACGGAAAGAGACTGATCTAAGCAAGCCTTTGCAGAAAGATCCCCCACTGTCGAAAATGGGAAATAATGACGATGCAAGGCAGGGAGGACCACTCAACAGTCCAGGTCCAATGAAAAGCTTTGCTGAAGATCGATCTGAAAGTGATGTCCAAAGACATGCAGCGGCAAACGTTATATGCAGCTGTATCAAGCAAGATTCGGCATATATATTGAAGTGTGAACAGTGCCAAAATGTTCACACTATCTTGTGTCCCCAATATAAAGAGTGCAAATTAAGAGGACATACTTTAGCACTGTGCCCATATAAAGCTGACGAGATTTATTCCTCTCAAGATCATCTTAGATTGTCCAAGGAAAAATCTAAAGATTGCCTGAAGCAACATTTTTGTATGGAGGGTTCTACTTCTGATTCGTTTTTGGTGTGCTATGACTGCCAGTTGATCCATGACCACaactgtcattttattaaaatgtgcagtttaaaACACACCGTGCGGCCAACAGGAAAATTACAGCCCCCTCAAGAAGAGGTTAATACCCATAAGAGGCACAAATGTCTTTCTTCTGCACATCATCAGCAGCACTCCCAGGAAACAAGTGCTTCGGAGACAACTTGTGCTCCAATGTCGTATCACGAACATTGCTGGAAGAGTAACCTAACTTTGCCAGAAGTCTTATGCCTCACTTGTAAAGTCTTTCATTTCTCTGGGTGTCCTGTTCGATGGCAATGCTCTCAAGAACACCGCATTAAAATAGTTGATATATTCTGCATCAGTTGCTTGAGCCATGAACTTAGCACCTTATGCAGATATTGTGGTGCCGTGTATTGCAAACtgtgttgctttaaaaataccATGATTTGTAAGTGTGGAAAGCCTTTCCTCAACCCAACTTCTGTTTAAGATGACTGCATGTCAGCCTTACCATATGTGGCTGAAGACACTGTTTTTAATCTCCGTAATAAGCCTGTTATTATTTTGCTACTTACACAATAAGTTCAAATACTGGGTAATATAAACATGACAATCTTACACTTTCAGTTTTTgatatcagaaatgtttttgtatgacAGAAGCCAAATATTTCAGGAAAGTAACAAAATTCACTGTAAGAGTTGACTATCTCTTACTAATCTATATATCATAAAGTAACATGGCTCATATCTAATCTGTTAATGGTGAGACTGTGTGATGGCCAGTCCAAGATTTGATGTATTCAGTTATTAGTATAATATGTTCTAGAAAAATTATGGCTTTGGGTCTTAGCAACAACTCCAACCATAGTGtcatataattaaaagaaatgtacatGACTTTTATTATGGTTGTTTAATagaattcatataaaaataaagaagcaaAAAACAGAA
>XM_043263939.1
ATGTCAAAAAAGTTTATCCACCGGGAAACAGCGACGTTCTTCAAAGCAGCTGTGTTGGACGTTGACGCTTGATCAGGATGAATTCTGCTTATAAAAAGGACGGTCTCATCACTAGGTACCAGACTAACTTAGAGAGACGAATTGAGAAGGGAGATCGAAGTTTAGTATGCAGGGATGAGGATTTTTGTAAGGAAGTCGAAATGCTCCTTCACAGTGGCAGTGCCCGGAAGATACACAATCTGCATGGATTGGATTCACTGGCAGTGATGGAAAAATCTCTTCCTGCATTTCCCTCTAAAACTGGCCAAATGCGCCTCGAGAAACTTTCCAAGGCCTTTGAAGTGCTGGAGCTTGCGGCATTAAACCTCTACATCTACCCCTGGAGAAGAGAGTACAGACAGGTGAAGATGTTTTCAGGTATGTTCACCCATTTGATCAAACCTGCACTGACACTTCAGCAGGCCAAAGAGCTGTTTGGTTTGCTTGGATACAAGGCTTCAAGTCCTAATGAAGAAGAAGAGTTGGCTCTGAACTCCAAACTCGTTCCTTCTGAATATTTACTCAGTCTTGCTTGTGGCTTCTTTGCTGCCCGGATGGAGTGCCAGCTGCTGCTTTCGGCCTTGGGCTCTGTCGACAGAGATGTGGAGTGGGTTCTACAGCTAGTCAAGGAGAGGCAGGGGGGCCAGAGTCTTCAAGTGGCCTTGGAGAACACCAAGAGAAAGTCAGATCCTGCTAGTGTTTCAGAAGCCATCCTGGCAGGTGACATGGACGCTGAGGTGGATCTGTACACGGAGCAGGCGGATGCTTCTCACATGACATCCGCTTCTGGTTCGCCTTCTCACGCTTCTTATATGACACGGAAAGAGACTGATCTAAGCAAGCCTTTGCAGAAAGATCCCCCACTGTCGAAAATGGGAAATAATGACGATGCAAGGCAGGGAGGACCACTCAACAGTCCAGGTCCAATGAAAAGCTTTGCTGAAGATCGATCTGAAAGTGATGTCCAAAGACATGCAGCGGCAAACGTTATATGCAGCTGTATCAAGCAAGATTCGGCATATATATTGAAGTGTGAACAGTGCCAAAATGTTCACACTATCTTGTGTCCCCAATATAAAGAGTGCAAATTAAGAGGACATACTTTAGCACTGTGCCCATATAAAGCTGACGAGATTTATTCCTCTCAAGATCATCTTAGATTGTCCAAGGAAAAATCTAAAGATTGCCTGAAGCAACATTTTTGTATGGAGGGTTCTACTTCTGATTCGTTTTTGGTGTGCTATGACTGCCAGTTGATCCATGACCACaactgtcattttattaaaatgtgcagtttaaaACACACCGTGCGGCCAACAGGAAAATTACAGCCCCCTCAAGAAGAGGTTAATACCCATAAGAGGCACAAATGTCTTTCTTCTGCACATCATCAGCAGCACTCCCAGGAAACAAGTGCTTCGGAGACAACTTGTGCTCCAATGTCGTATCACGAACATTGCTGGAAGAGTAACCTAACTTTGCCAGAAGTCTTATGCCTCACTTGTAAAGTCTTTCATTTCTCTGGGTGTCCTGTTCGATGGCAATGCTCTCAAGAACACCGCATTAAAATAGTTGATATATTCTGCATCAGTTGCTTGAGCCATGAACTTAGCACCTTATGCAGATATTGTGGTGCCGTGTATTGCAAACtgtgttgctttaaaaataccATGATTTGTAAGTGTGGAAAGCCTTTCCTCAACCCAACTTCTGTTTAAGATGACTGCATGTCAGCCTTACCATATGTGGCTGAAGACACTGTTTTTAATCTCCGTAATAAGCCTGTTATTATTTTGCTACTTACACAATAAGTTCAAATACTGGGTAATATAAACATGACAATCTTACACTTTCAGTTTTTgatatcagaaatgtttttgtatgacAGAAGCCAAATATTTCAGGAAAGTAACAAAATTCACTGTAAGAGTTGACTATCTCTTACTAATCTATATATCATAAAGTAACATGGCTCATATCTAATCTGTTAATGGTGAGACTGTGTGATGGCCAGTCCAAGATTTGATGTATTCAGTTATTAGTATAATATGTTCTAGAAAAATTATGGCTTTGGGTCTTAGCAACAACTCCAACCATAGTGtcatataattaaaagaaatgtacatGACTTTTATTATGGTTGTTTAATagaattcatataaaaataaagaagcaaAAAACAGAA

Function

NR:

description
spermatogenesis-associated protein 2-like protein

GO: NA

KEGG:

id description
K17595 SPATA2; spermatogenesis-associated protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263938.1 True 2370 mRNA 0.41 3 23958510 23961023
XM_043263939.1 False 2224 mRNA 0.42 3 23958161 23961023

Neighbor

gene id symbol gene type direction distance location
vps9d1 vps9d1,LOC107749294,LOC107553982,LOC107670156,LOC107748773 coding upstream 5950 23937000 ~ 23952211 (+)
utp4 utp4,LOC107749295,LOC107553989,LOC107748774,LOC107583899 coding upstream 21851 23928290 ~ 23936310 (+)
wfdc1 wfdc1,LOC107553961,LOC107749317,LOC107684670,LOC107583842,LOC107670154 coding upstream 30573 23915929 ~ 23927588 (+)
si:dkey-246g23.4 si:dkey-246g23.4,LOC107553963,LOC107684669,LOC107749297,LOC107738435 coding upstream 46179 23899926 ~ 23911982 (+)
kcng4a kcng4a,kcng4,LOC107749318,LOC107553964,LOC107738382,LOC107684667,LOC107670163 coding upstream 65996 23859036 ~ 23892165 (+)
uri1 uri1,LOC107553985,LOC107684674,LOC107670159,LOC107583840 coding downstream 2005 23963028 ~ 23970059 (+)
LOC122362775 cdh13,LOC107722459,LOC107684661,LOC107738387 coding downstream 173390 24134413 ~ 24181542 (+)
cry1b cry1ab,LOC107672239,LOC107553944,LOC107583830 coding downstream 316259 24277282 ~ 24286775 (+)
zgc:153031 zgc:153031,LOC107664682,LOC107583831,LOC107672313,LOC107553959 coding downstream 326115 24287138 ~ 24291459 (+)
si:ch73-62b13.1 si:ch73-62b13.1,LOC107749314,LOC107740436,LOC107672215,LOC107553958,LOC107583921,LOC107664683,LOC108425440 coding downstream 347153 24308176 ~ 24314980 (+)
G128725 NA non-coding upstream 170998 23785024 ~ 23787163 (+)
G128699 NA non-coding upstream 598604 23358451 ~ 23359557 (+)
G128696 NA non-coding upstream 621072 23335791 ~ 23337089 (+)
G128476 NA non-coding upstream 877851 23068310 ~ 23080310 (+)
G128475 NA non-coding upstream 891093 23066812 ~ 23067068 (+)
G128753 NA non-coding downstream 67466 24028489 ~ 24029817 (+)
G128770 NA non-coding downstream 95697 24056720 ~ 24063271 (+)
G128772 NA non-coding downstream 97330 24058353 ~ 24066103 (+)
G128803 NA non-coding downstream 336086 24297109 ~ 24297333 (+)
G128804 NA non-coding downstream 336586 24297609 ~ 24297845 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 221313 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 1519482 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 1546204 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3317102 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3357642 20589684 ~ 20600519 (+)
G128858 NA other downstream 488742 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 622822 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 1333720 25294743 ~ 25309740 (+)
mt2 NA other downstream 1385369 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1960244 25921267 ~ 26174156 (+)

Expression


Co-expression Network