cbln1 (cbln1,LOC107549644,LOC107583779,LOC106573707)


Basic Information

Item Value
gene id cbln1
gene name cbln1,LOC107549644,LOC107583779,LOC106573707
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 25656644 ~ 25662430 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264112.1
catgctttaaaattaaataagtcAAAACTCGTAAGACCTAATTACCGTAACTCGgcatattgcaaaaaatatagCCTAATAAAATGCGATGCGAAAgctctttaatattttctaCCAGGAATGTCTTTAGTAGTTTAAACGGTTTCTAGAAACAAAACATAGTCTTCAGACTGTAAACGACATGCTATTGTACTTTTCTGTTAAATACAGTAGTCCTCCCTGCGTAAAGTTGTCTTGTCCATCTGTAGAAGAATGTCTAATCGTCACTGCTGTCGTGAAGTGTCCTTTTCTCAGCCATAGGTGTCCGATAGGGAGCAAAAACAACTTTGTGAACTTCTTCCACCCGGCGTTCGTGAAGACAACCTCCGCTGAGTTTCCTCGCGCGCACAATCCATTCATCTTGAGTAACGTTTTAAGATGGCGCGGAAGAACAAATCGCGTCCTTGTGTCCACTAGAACGATGAAAAAATAACGCGCCCCATTTTCTCAGGATCGGGGTGTCATCCCCTTCTGTCTGCTGAGTAGGGTCCACCTGTAAGATACTTCTTTTGAGGGGTGGGACCCCACCGGCGCTGTCACGAGAAGAGGCGGTCCGTGCACCGGCTTGGAAAAGGATTGGAAAAGTAAAGACCGTCTCCTGCGCTGATTGGGGGCCCGGAGGGGAGAGCGAGGAGGGCGGGAGGATTGCGCTCACGAGCCTTTGTGTTTCACTTCTAATATCTCACATATCAATAATTGAGCGCGCGAGCAGACGGACCCCACGCGCTATGTATTCTACTGCGCGCGAGCTCGGTAAGGGCCTTGATCCGCTTTCAGTCGGCTCTTCCACTACGGACTGAGACGGGAACGAGGGGGAAACTGTTGTAGTTTTGACTTGAACTGTTTGGAAGGACTTGCTTTTACAGTGAGGACAGGTTTGGAGTGGTTTTGGTTTGGGATTTGAGCGCGCTGCGTCTTTGCGAAAAGACTGCTGTTAGGTGCGGAGTGAAGTTGGCATGATGTTGACGTTGGTGCTAGGCGCAGTGTGGTTAGTGTGCCATGCGTACGCACAGAACGAGACAGAACCCATCGTACTGGAGGGGAAATGCTTGGTCGTGTGCGACTCAAATCCCACCTCGGATCCCACTGGGACGGCTCTTGGGATATCGGTGCGCTCGGGAAGCGCCAAAGTGGCTTTTTCCGTGGTGAGGAACACGAACCACGAGCCGTCTGAGATGAGCAATCGAACAATGGTGATCTACTTCGATCAGGTACTTGTGAACGTCGGTAGAAGTTTCGACGAGGAAAGGAGCAATTTCTTCGCCCCGCGCAAAGGGATATACAGTTTTAATTTCCACGTAGTGAAAGTGTATAATCGTCAAACGATCCAGGTGAGCCTGATGCACAACGGCTGGCCGGTGATCTCCGCCTTCGCCGGGGATCAAGACGTCACGCGCGAAGCGGCCAGTAACGGCGTTCTGATTCAAATGGAGAAAGGTGACCGCGCCTACCTCAAGCTGGAGCGAGGCAACCTGATGGGCGGCTGGAAGTACTCCACTTTCTCCGGCTTCCTGGTCTTCCCTCTGTAGAGGAGGGGCACGCGATGGAAGGACTATTGCTCTTTAGCTCGCCGGCTTGTGGGAGATAGAAGGGATATGAGGGCGGATGAGAGATAGAATGATAGcgagaatgtaaaaaaaaaaaaaaaaaacatataggaAGAGAAAATTTAGTGTGGCAGGCTCTCAGTCGCACTCACTTTGCTCTGCTGCTTGACTTCAGCTCTGGACagccaaaacttttttttttttattatccttatgataataataatatggaaAGAAAGCATACCGAGGACCGTAGCCCTTCCTACACCCCCCCCCCCGTTTACTCATCCCATCACAATCCACCCTCAAAAGTCATCATCTGCTTTAAGGATTGTCCTACAACAGCCCAGACCCCCATTTCACACTGGTCACATCTTTGTATATTCTCTCCATACGTACATACTGTCTCAAATGCCATTGTCATTCCTCTCAGTCCAGTCGCCCCTTCTTTTCTGGCTTCCTCCAGCTCACCCTTTCTTGTCTCTGAGAGGGTGTCTTTGCGTCTTTGTCATGACAGAAGGATCTCTGAATCCCCACGAAAAGACTGCATACtggatatatacatatataaatacgtaAAAAAGTTTCTATATGATTATGATATACTCAACGCCTAACTGAATCTGGTTGactctgtatttctgtatttcagtGTTAATACTTAGTGATTGTGTGTGGATTTTCAGGCTGCTGTCCAACTACCAAtgcttcttgtttttgtttcggTCAAAAATGTGGCTAAGATGAAACTATATCAGAAATACTATAAAGTACAAAGTTTTATTATCATTGATTGTAAGATATATGTGAATATTTAGCAGGCAAAATCCTCCCTTTTAATCAGTtaaccattgtttttttttttctttgattcaataaaaattaaatggtacttttta

Function

symbol description
cbln1 Orthologous to human CBLN1 (cerebellin 1 precursor).

NR:

description
cerebellin-1-like

GO: NA

KEGG:

id description
K24235 CBLN; cerebellin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264112.1 True 2485 mRNA 0.46 3 25656644 25662430

Neighbor

gene id symbol gene type direction distance location
si:ch211-212o1.2 si:ch211-212o1.2,tmem189,LOC107738740,LOC107740306,LOC107672277,LOC107583780,LOC108264382,LOC106560866 coding upstream 17273 25614213 ~ 25639371 (+)
znf423 si:ch211-216l23.1,LOC107738741,LOC107583782,LOC107740334,LOC107672235,LOC107549642 coding upstream 44516 25471074 ~ 25612128 (+)
si:ch211-216l23.2 LOC107549641,LOC107740307,LOC107583785,LOC107672316 coding upstream 192541 25457998 ~ 25464103 (+)
rspry1 rspry1,LOC107583786,LOC107672266 coding upstream 199357 25445589 ~ 25457287 (+)
cpne2 cpne2,LOC107583787,LOC107740309,LOC107672324 coding upstream 219871 25417863 ~ 25436773 (+)
n4bp1 n4bp1,LOC107549646,LOC107738738,LOC107743359,LOC107583777 coding downstream 109705 25772135 ~ 25782486 (+)
siah1 siah1,LOC107742888,LOC107549647,LOC106573709 coding downstream 124904 25787334 ~ 25803910 (+)
st3gal2 st3gal2,LOC107742884,LOC107672232,LOC107686287 coding downstream 192011 25854441 ~ 25875732 (+)
trnal-cag_32 NA coding downstream 234993 25897423 ~ 25897505 (+)
LOC122322950 LOC107549654,LOC107576747,LOC107672203,LOC107742895,LOC107686352 coding downstream 235112 25897542 ~ 25902915 (+)
G129270 fam192a non-coding upstream 214203 25440048 ~ 25442441 (+)
G129262 NA non-coding upstream 307606 25348756 ~ 25349038 (+)
G129246 NA non-coding upstream 368107 25288143 ~ 25288537 (+)
G129135 NA non-coding upstream 514785 25063454 ~ 25141859 (+)
G129134 NA non-coding upstream 612824 25043088 ~ 25043820 (+)
G129360 NA non-coding downstream 67 25662497 ~ 25663585 (+)
G129368 NA non-coding downstream 12641 25675071 ~ 25675310 (+)
G129370 NA non-coding downstream 14127 25676557 ~ 25676861 (+)
G129435 NA non-coding downstream 304586 25967016 ~ 26221023 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding downstream 494477 26156907 ~ 26158502 (+)
mt2 NA other upstream 308050 25346392 ~ 25348594 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other upstream 346904 25294743 ~ 25309740 (+)
LOC122323037 NA other upstream 1068307 24583845 ~ 24588337 (+)
G128858 NA other upstream 1199084 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 1919796 23457100 ~ 23736848 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 258837 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 289900 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 566664 26229094 ~ 26332010 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other downstream 641457 26303887 ~ 26306806 (+)

Expression


Co-expression Network