si:dkey-246g23.4 (si:dkey-246g23.4,LOC107553963,LOC107684669,LOC107749297,LOC107738435)


Basic Information

Item Value
gene id si:dkey-246g23.4
gene name si:dkey-246g23.4,LOC107553963,LOC107684669,LOC107749297,LOC107738435
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23899926 ~ 23911982 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264170.1
ATGCTCAGGTCCAGAGATTATTCGAGCGTTGGAAATTGTTGTGTAACTTCTGCGGTATAACAAGATAAACTCTCTTACATCCTCTGTATTAGAGCACTATCAGGAAATGCACCACCTTTTcattcaataatataatataatataatataatataatataatataatataattttttctctcttatttGAAATAACAGGTTACCTCCCCTTTCTGCTTTCCCTGTGTTGACCTTTGTATTTCTGTGTACAGTATCATGGATATAGAGTGTCATTGAAGATGGAAGTGGGAATGAGAGTCTTCTCAGCCGACAGACAACATGAGAGGTTGCAGATGATGGTTTGAACTTCTCTCCTGAGCTTACAATGGAGCTACGAAGGAAGAGGAGAACGGTTCAACCCGCAGGTCCTCTGGATGGAGGCTATGGCTGGTTCATAGTGCTTTCCACCTTCCTTGGCTTTGGGCTGACATTTGGTGTAATCAAGTCCTTCGGGGTGTTCTTCGTAGAAATCCACCACTACTTCGCGACCACAGCGACAGCAAGCTCATGGATCACGTCTATCTCTGTGGCAACTGTACATTTTGGAGCCCCCGTAGGCTCCGCTCTGAGCGCGTACTTCGGCCATCGGCCAGTGGTCATGGCGGGGGGTCTGCTGAGCAGCATTGGGATGGTGGCCGGGTCATATGCCCAGGACCTGCTACAGCTGTACATCACTGTGGGGTTCCTTACAGGATTTGGCTATGCCCTGACCTGGACCCCTACTGTGACCATGCTGGGCTGGTACTTTGACAAGCGACGGCCGGTGGCCAACGCTCTGGCCAGCACAGGAGAGTGCGTCCTCACCTTCATCCTCACCCCATCCTTCCAGTTCATGGTGGATCAGTATTCCTGGAGGGGTGCGATGCTGATCCTAGGAGCTCTGCAGCTCAACTTGTGTTTGTGCGGAGCTCTTCTGAGACCCCTCAACAGACACGTTCCTTCTAAAGAGCTCGTAGAGGAGAAAGAGCCCGAGCTGGAGATGTTACCTCAACCTCACGTAGACTCTAGAAGTTTACAAAATGGATCAGACTCAAAAAAATCGGATCCACTGAAGGTCAAAATCATTCGTTACGTGGACTACACTCTTATCGCTAATGCTCGCTTCATGGTCTACTCAATGTTTGGTGTTTTCGCTGCTCTCGGCTTCTTcgctccatctctctttctggTCCCGTACGCCCGCAGTCAAGGAGTGGAAGAGTACCAGGCAGCCGCTCTCATGTCCATCTCTTCGGCGCTGGACCTGTTAGGCCGGGTGTTATTCGGGTGGGTGGCTAATCTGCGGCTGGTCGAGACAGTCCATCAGCTGATTGTCACCGTGATTTTACTGGGCATTGTTCTGCTGCTCTGCCCATTTGCAACCACATTCACCCAGCTTGCGCTGTTCAGTGCGAGCTATGGACTGGTGTTTGGAGCGACTGTGGCCATTCACATCACGGTGCTCGCGGACGTGGTGGGGGTGGAGAGGCTGGGAAGTGCTCTGGGCTTCTTCATGCTCATCCGCAGCAGTGGTGGCCTCCTTGGACCACCTTTGGCAGGAATCTTCATAGACAAAATGAGTGACTATGGCACTGGTTTTCTGATGGCGGGCGTGGCACTTCTGGTCTCCGCCCTCTTTCTCCTTGTGTTacagaagatgaacaaaaaagAGACGGGAAAGGTTAAGGACGTCAACTTGGAGAATAGGAAAGGACATGAGGATCTAAAACACAGACGTTTCAGTTTCAGAAAAAGTTAGTAAGAGGAGGCTCAGACATAACGTGTAATGTTTCACCACAAATGCAGTCATGTAAGCAGAGATTATAGTTAAATGACATTCAAAAGTGTAAACTGAAAACATGTCCTCATGCTGCTGATATGCACTGTCTGTCCATTCGTGAAGGAAACTCTTAATGACAGCGAGTGAACAGACATTTTCACCTAAATAAAGCTTTTGATGGCTTCTGGGAAGTCTTCTTAGCGTAGCCCTACAGCCGTGCCATTACAAGCAATATTTCATCAGATCTATTGCTCTGGAAAATGGGCAGTGACTTAATGGACTAATGGAACTGACTCAGTTTAGCTGCAGCCAAAGATGATCACATGCAGTCAAGAACAATATCTGCAGCAATTTCTTGTGTGACATTAAGAATGTATTTTAGTCTGTCTGGCCAAAATTGCTCAAATTTGGGTTGGACTTTGGCGTCTCCAGGTGTCATCTAAATCCCACAGTCTTCTCAATGAGAAAACGTTCTCATTTATCGCCCTCTGAAGGTGAGAAACTGGAAATGCAGGATAGATGGCTACCGTGAAACTGTAAATTACCTAATTTCcacattatttgttttatacatattataaataagctgtttttttaatgtataatctCTATTAGATTAAAACGgctgtttattttacatgtagCAACTGTCACATCAGTAAGTCAAGATTAAAGTGACTAAGTGCATATTTAAGAGAGGataaaacgaaaaaaaaggtccattttgttttgctaaaaaaCATCTTAGTATAGCTTGATCCTGGATCTGTGGGAGATAAATGTCTTTCTGAAGGCATAGACTAAAAACACAGGCACATCCTGCTGAAGAAAACCACACGATAGATAGCAGTGTCTAGATCTTTCCTGTTTACACTGTGTGATGAAACGGTAACCATTCAAAGCCAAACCATCTTTATAAGACATCAAAGCATATTTCTCATCTCTCCTCTCTTCACAATAATCTGTTCCCAACATCTGCactttgatgtattttatgcatGCTGGTCTGTGTGTATCACAGATaaataaatggctttttaaactggggggaaaaaagaaataaatggaaaataacagaaataaaattcaatatgCTTGTTATTTTGCATGAATCTGAGAAAGCAAACCTTCTGCTAGACAATAAAGAGCCTTCAGTGgcatacaaattaaaaa
>XM_043264171.1
CACAGCAGACCAGAGGCTTAGTGCAACAACACACCTAATGGCTTACAGTATCATGGATATAGAGTGTCATTGAAGATGGAAGTGGGAATGAGAGTCTTCTCAGCCGACAGACAACATGAGAGGTTGCAGATGATGGTTTGAACTTCTCTCCTGAGCTTACAATGGAGCTACGAAGGAAGAGGAGAACGGTTCAACCCGCAGGTCCTCTGGATGGAGGCTATGGCTGGTTCATAGTGCTTTCCACCTTCCTTGGCTTTGGGCTGACATTTGGTGTAATCAAGTCCTTCGGGGTGTTCTTCGTAGAAATCCACCACTACTTCGCGACCACAGCGACAGCAAGCTCATGGATCACGTCTATCTCTGTGGCAACTGTACATTTTGGAGCCCCCGTAGGCTCCGCTCTGAGCGCGTACTTCGGCCATCGGCCAGTGGTCATGGCGGGGGGTCTGCTGAGCAGCATTGGGATGGTGGCCGGGTCATATGCCCAGGACCTGCTACAGCTGTACATCACTGTGGGGTTCCTTACAGGATTTGGCTATGCCCTGACCTGGACCCCTACTGTGACCATGCTGGGCTGGTACTTTGACAAGCGACGGCCGGTGGCCAACGCTCTGGCCAGCACAGGAGAGTGCGTCCTCACCTTCATCCTCACCCCATCCTTCCAGTTCATGGTGGATCAGTATTCCTGGAGGGGTGCGATGCTGATCCTAGGAGCTCTGCAGCTCAACTTGTGTTTGTGCGGAGCTCTTCTGAGACCCCTCAACAGACACGTTCCTTCTAAAGAGCTCGTAGAGGAGAAAGAGCCCGAGCTGGAGATGTTACCTCAACCTCACGTAGACTCTAGAAGTTTACAAAATGGATCAGACTCAAAAAAATCGGATCCACTGAAGGTCAAAATCATTCGTTACGTGGACTACACTCTTATCGCTAATGCTCGCTTCATGGTCTACTCAATGTTTGGTGTTTTCGCTGCTCTCGGCTTCTTcgctccatctctctttctggTCCCGTACGCCCGCAGTCAAGGAGTGGAAGAGTACCAGGCAGCCGCTCTCATGTCCATCTCTTCGGCGCTGGACCTGTTAGGCCGGGTGTTATTCGGGTGGGTGGCTAATCTGCGGCTGGTCGAGACAGTCCATCAGCTGATTGTCACCGTGATTTTACTGGGCATTGTTCTGCTGCTCTGCCCATTTGCAACCACATTCACCCAGCTTGCGCTGTTCAGTGCGAGCTATGGACTGGTGTTTGGAGCGACTGTGGCCATTCACATCACGGTGCTCGCGGACGTGGTGGGGGTGGAGAGGCTGGGAAGTGCTCTGGGCTTCTTCATGCTCATCCGCAGCAGTGGTGGCCTCCTTGGACCACCTTTGGCAGGAATCTTCATAGACAAAATGAGTGACTATGGCACTGGTTTTCTGATGGCGGGCGTGGCACTTCTGGTCTCCGCCCTCTTTCTCCTTGTGTTacagaagatgaacaaaaaagAGACGGGAAAGGTTAAGGACGTCAACTTGGAGAATAGGAAAGGACATGAGGATCTAAAACACAGACGTTTCAGTTTCAGAAAAAGTTAGTAAGAGGAGGCTCAGACATAACGTGTAATGTTTCACCACAAATGCAGTCATGTAAGCAGAGATTATAGTTAAATGACATTCAAAAGTGTAAACTGAAAACATGTCCTCATGCTGCTGATATGCACTGTCTGTCCATTCGTGAAGGAAACTCTTAATGACAGCGAGTGAACAGACATTTTCACCTAAATAAAGCTTTTGATGGCTTCTGGGAAGTCTTCTTAGCGTAGCCCTACAGCCGTGCCATTACAAGCAATATTTCATCAGATCTATTGCTCTGGAAAATGGGCAGTGACTTAATGGACTAATGGAACTGACTCAGTTTAGCTGCAGCCAAAGATGATCACATGCAGTCAAGAACAATATCTGCAGCAATTTCTTGTGTGACATTAAGAATGTATTTTAGTCTGTCTGGCCAAAATTGCTCAAATTTGGGTTGGACTTTGGCGTCTCCAGGTGTCATCTAAATCCCACAGTCTTCTCAATGAGAAAACGTTCTCATTTATCGCCCTCTGAAGGTGAGAAACTGGAAATGCAGGATAGATGGCTACCGTGAAACTGTAAATTACCTAATTTCcacattatttgttttatacatattataaataagctgtttttttaatgtataatctCTATTAGATTAAAACGgctgtttattttacatgtagCAACTGTCACATCAGTAAGTCAAGATTAAAGTGACTAAGTGCATATTTAAGAGAGGataaaacgaaaaaaaaggtccattttgttttgctaaaaaaCATCTTAGTATAGCTTGATCCTGGATCTGTGGGAGATAAATGTCTTTCTGAAGGCATAGACTAAAAACACAGGCACATCCTGCTGAAGAAAACCACACGATAGATAGCAGTGTCTAGATCTTTCCTGTTTACACTGTGTGATGAAACGGTAACCATTCAAAGCCAAACCATCTTTATAAGACATCAAAGCATATTTCTCATCTCTCCTCTCTTCACAATAATCTGTTCCCAACATCTGCactttgatgtattttatgcatGCTGGTCTGTGTGTATCACAGATaaataaatggctttttaaactggggggaaaaaagaaataaatggaaaataacagaaataaaattcaatatgCTTGTTATTTTGCATGAATCTGAGAAAGCAAACCTTCTGCTAGACAATAAAGAGCCTTCAGTGgcatacaaattaaaaa

Function

symbol description
si:dkey-246g23.4 Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane.

NR:

description
monocarboxylate transporter 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264170.1 True 2970 mRNA 0.44 5 23903651 23911982
XM_043264171.1 False 2768 mRNA 0.46 6 23899926 23911982

Neighbor

gene id symbol gene type direction distance location
kcng4a kcng4a,kcng4,LOC107749318,LOC107553964,LOC107738382,LOC107684667,LOC107670163 coding upstream 7761 23859036 ~ 23892165 (+)
si:dkey-246g23.2 si:dkey-246g23.2,LOC107749300,LOC107553994,LOC107684666,LOC107670153,LOC107738383,LOC108415329 coding upstream 46651 23818053 ~ 23853275 (+)
zgc:173742 zgc:173742,LOC107553995,LOC107684664,LOC107749320,LOC108415671,LOC106560872 coding upstream 85186 23789393 ~ 23814740 (+)
plcg2 plcg2,LOC107722471,LOC107738392,LOC107684680 coding upstream 594588 23289516 ~ 23305338 (+)
meak7 tldc1,LOC107587014,LOC107722463,LOC107738391,LOC107684679 coding upstream 611863 23283862 ~ 23288063 (+)
wfdc1 wfdc1,LOC107553961,LOC107749317,LOC107684670,LOC107583842,LOC107670154 coding downstream 3947 23915929 ~ 23927588 (+)
utp4 utp4,LOC107749295,LOC107553989,LOC107748774,LOC107583899 coding downstream 16308 23928290 ~ 23936310 (+)
vps9d1 vps9d1,LOC107749294,LOC107553982,LOC107670156,LOC107748773 coding downstream 25018 23937000 ~ 23952211 (+)
spata2l LOC107670151,LOC107748780 coding downstream 46179 23958161 ~ 23961023 (+)
uri1 uri1,LOC107553985,LOC107684674,LOC107670159,LOC107583840 coding downstream 51046 23963028 ~ 23970059 (+)
G128725 NA non-coding upstream 112763 23785024 ~ 23787163 (+)
G128699 NA non-coding upstream 540369 23358451 ~ 23359557 (+)
G128696 NA non-coding upstream 562837 23335791 ~ 23337089 (+)
G128476 NA non-coding upstream 819616 23068310 ~ 23080310 (+)
G128475 NA non-coding upstream 832858 23066812 ~ 23067068 (+)
G128753 NA non-coding downstream 116507 24028489 ~ 24029817 (+)
G128770 NA non-coding downstream 144738 24056720 ~ 24063271 (+)
G128772 NA non-coding downstream 146371 24058353 ~ 24066103 (+)
G128803 NA non-coding downstream 385127 24297109 ~ 24297333 (+)
G128804 NA non-coding downstream 385627 24297609 ~ 24297845 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 163078 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 1461247 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 1487969 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 3258867 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 3299407 20589684 ~ 20600519 (+)
G128858 NA other downstream 537783 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 671863 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 1382761 25294743 ~ 25309740 (+)
mt2 NA other downstream 1434410 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 2009285 25921267 ~ 26174156 (+)

Expression


Co-expression Network