LOC122362645 (itpr2,LOC107672258)


Basic Information

Item Value
gene id LOC122362645
gene name itpr2,LOC107672258
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24590903 ~ 24659950 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264189.1
CACTTCCTTGATTTCACGGGACGGGGAGCGAGTCTCCTCCCACTCGAGTGGCATATTGGTGAGAAAAAAAGCCTCGTTTGTCTCACAGGAAGAAGTTGAAAACATGAAGAAACGCGACAGTTAGAGGAATCGCCACTCAAAAGTCACGGGCTCAGCACGTCTCTTCTCCGGACGACCGGATTACAATGCGTTTCTGTCAAGGCGAAGAAACAAGTGGCTTGAGACGCTGAGTCGACTCTATCAGAGGGGTTAAAGTATCAGAAAAACTACCGAAACGTTTGCAGTCATGTCGGAACACAGGTCCTGTTTCCTTCACATTGGGGATATCGTGTCTCTGTACGCGGAGGGAACTGTCAATGGATTTATCAGCACTTTAGGGTTGGTGGATGACAGATGTGTGGTGCAACCAGAGGCTGGGGATCTTACAAACCCACCGAAAAAATTCAGAGATTGTCTCTTCAAGGTGTGTCCAATGAATAGGTACTCTGCACAGAGACAATTCTGGAAGGCCAAACAGGGGAAACATGGGAACAACACACAGGGAGATCTCTTCAAGAAATTACAGCATGCAGCGGAGCTGGAGCAGAAACAAAATGACACTGAGAACAAGAAATTGTTGGGAGAGGTTGTCAAATATAGTCGGGTTATACAGCTTCTCCATATTAAGAGTAATAAGTACCTGACCGTGAATAAGCGTCTTCCTGCCCTGCTGGAGAAGAACGCCATGCGTGTGTCTCTGGATCCTTCAGGAAACGAGGGCTCCTGGTTCTACATCCAGCCTTTTTGGAAGCTACGCAGCGAAGGAGACAATGTGGTAGTTGGAGATAAAGTGGTTCTAATGCCTGTAAATGCAGGGCAGCCTCTTCACGCCAGCAATATCGAACTTCTGGATAACCGTGGCTGCAAAGAGGTTAACGCTTTGAACTGCAACACTAGTTGGAAGGTCACTCTTTTCATGAAATGCAGTGAATACAGAGATGACGTATTAAAAGGGGGGGATGTGGTGAGGTTGTTTCATGCTGAGCAAGAAAAGTTTCTTACTTGTGATGAGTACAAAAAGCAGCAGTATGTCTTCTTACGAACCACTCTCCGCCAATCAGCAACCTCCGCCACCAGTTCAAAAGCACTATGGGAAGTGGAGGTTGTCCACTATGACCCCTGCAGAGGAGGAGCTGGCCAGTGGAACAGCCTGTTTCGCTTCAAACACCTCGCCACAGGACACTACCTTGCGGCAGAGGTGAATCCTGTTTTCAAAGATCGTACCGACAGTATCACCACCAAAAACGAGACCAACGCAGACACTTTGTACTCTAAAAAGAAGTGGCAGGCTGACAAGATCCCCTACACGCTTGTTGCAGTGCCCCATGGCAATGACATTGCCTCTCTTTTTGAACTGGATGCCACCACCCTACAGCGGGCAGACTGCCTAGTTCCCAGGAACTCGTATGTGAGACTCAGGAACTTGTGCACAAACACTTGGGTGACCAGTACTAATATTCCCATTGATGTTGAGGAGGAACGCCCCGTTATGCTCAAGATCGGCACCTGCCACATGAAGGAGGACAAGGAGGCTTTCTCCATTAATTCTGTCCCCATGTCAGAAGTCAGAGATTTGGACTTTGCCAATGATGCCAACAAGGTCTTGGAGATGTTTGTGCGTATTTTGGGGATCAGCAATTTCCCAGTAGCAAATGAGCGCAGGTTTACCATTAAGCTTTTGGAGGATTTGATCTTCTTTGTATGCGATGTGCCGAACAACGGACAGGACGTGCTGGCTGTAGTCACTTCGAACCCCAACAGAGAGAGGCAGAAACTCATGAGAGAGCAGAACATCCTGGCACAGatcTTTGGAATTCTTAAAGCCCCATTTTCTGAAAGCAAAGAATCATCCATGCCGAAGCTGGAAGATATGGGAGAGCAACGCAACGCTCCATTTAAGTACATGCTACAACTTTGTTACAGAATTCTGCGCCATTCCCAACAAGATTACCGCAAGAATCAGGAGTACATAGCCAAGAATTTTTCCGTCATGCAGGCTCAGATAGGCTATGAGATCCTGGCTGAAGATACAATCACTGCTCTTCTGCACAACAACCGCAAGCTGTTAGAGAAACACATCACTGCACGTGAGATTGAGACCTTTGTCAAACTTCTGCGCAGGAACCGAGAGCCCAGATTTCTGGATTATTTGTCTGACCTGTGTGTCTCCAACAAAACAGCCATTCCTGTCACTCAGGAACTGATTTGCAAATTCATGCTGAACCCCACCAACGCAGACATCCTCATCCAGACCAAACTAATCCCACACACTGAGACCTCTCTGGAGTCATCTTTAATCCAGGAGGATGGTGATGATGAAGAGGTATGGCTATACTGGATTGATAACCACAAAGAGCCTCATGGGAAGTCCATCCGCCACCTGGCTCAGGATGCCAAGGATGGGCAAAAAATGGATGTTGACATCATCACCTACTACAGGTGTCAGCTCAATCTCTTCGCTAAAATGTGCCTGGATCGGCAGTATCTGGCCATCAATCAGATCTCCAATCAGCTGCCAGTAGATCTAATCCTGCGCTGCATGTTTGATGACTGTCTGCCTTACAACCTGCGTGCCTCATTTTGTCGTTTAATGCTGCACATGCATGTGGACCGCGACCCACAGGAGGCCGTGGTACCTGTTCGCTATGCACGACTCTGGACTGAGATACCCTCCAAGATCTCGGTCAATGAATATGACTATGAGTTCAGAGACACTTCCAGAGAGGATATGAAGAGAAAGTTTGCCCCTACTATGCATTTTGTGGATGAATATCTCAAAGATGTGGTCAGTCAGCCTGATCCCTttggagacagagagaaaaatgaaTTGACCCTTGAGGTGGTCCACCTGGCACGTAACCTGGTCTACTTTGGCTTCTACAGCTTTAATGAGCTGCTTTGTCTCACGCGCACCCTGCTGGCCATCCTGGACATTGTCCAACCCACTTCCACATTTATGTTTAAACTCAACAAGAGTCCTGAGGGAGGTAATAATGTCATGCGTACCATCCACGGTGTGGGTGAGATGGTGACTCAGATGGTTCTAAGCAGAGGCTTGATGATGCCCCACTGTCTCCCTGATGCTCAGCCAATCCACGGAAAGCAGATCTGTCTCCCTGACAACGAGAACGTCATGGTGATGGACACCAAGCTCAGGATTATTGAGATTCTGCAGTTTATTCTGAATGTGCGACTTGATTACCGCATCACCTATCTGCTGTCTATCTATAAAAAAGAGTTTGGCGACCAGACTTTGGACACTTCTGCTTCAGTGGCAGAAGTTCCTGTCATGGCTGAGCCAAACATTGAGGAGATTGCGGAGAAAGCAGAGAATATGTTTTCGGGAAGTGCTAAGGAGAGGAGCTCGGTGGACCTTGACGATGAAGGCGGTCAGACATTTCTGCGGGTGCTTATTCACCTCATCATGCAGGACTACCCTCCGCTGGTGTCCGGTTCTCTTCAGCTCATCTTCAAACACTTCAGCCAGAGAGCCGAAGTTCTGCAGGCCTTCAAACAGGTCCAGTTGCTGGTTTCAGAGGAGGATGTTGAGAATTATAAGAAGATCAAGGCAAGTCTGGACCAGCTGCGGCTGACAGTGGAGAAGTCTGAACTCTGGGTCGAGAAGAGTGGAGGTTACGGCAATGAAGACATTGCTGACAATCAAAACAAAGAGCAGAATTTGGAAGAAGCAGGTATCTTGAGCCCAGTGCAGGATGGGAGCAGTAAACCTCAAATAGACAGCAACAAAGCCAACAACTACAAAATTGTCAAAGAGATCCTGCTGAGTCTCAGTAAACTCTGCTCTCCTGGTAAGAAGATTCGTGTGCAGCAGCAGAGGCTGTTAAAGAATATGGGAGCTCACACTGTGGTGCTGGACCTCCTCCAGATCCCGTATGAGAAGGGGGATGAAAAGATGGACGAGATCATGACTCTAGCCCACACGTTCCTTCAGTACTTCTGCAGAGATAATCCTCAGAACCAGACGCTACTGCACAAACACCTCAACCTCTTCCTCACCCCTGGGCTTCTGGAGGCAAAATCTATGTGCTACATCTTCAGGAATAATTACCACCTATGCAACGAGATCAGCGACCGTGTGGTGCATCACTTTGTGCACTGCATCGAGACCCACGGCCGTCACGTGCAGTACTTGCGCTTCCTCCAAACCATTGTAAAAGCCGATGGCAAATACGTGAAGGAATGTCAATGCAAAGTCATGAATGAGCTGGTAAACGGAGGAGAAGACGTGTTGGTTTTCTACAATGATCGTGCTTCTTTCCCGGTACTGCAAAATATGATGTCGTCCCCGCGGGAGGAGAACGATGCTCTAGCATACCACATCACACTGGTGGAGCTGCTGGCAGCCTGCACCGAGGGCAAGAACGTTGATACAGAGCTCAAGTGCAACTCCCTTCTGCCGCTTGATGATATTGTCAAAGTGGTCACGTACGAGGGCTGCATTCCAGAGGTAAAAATTTCATATGTAAATTTCGTGAACCACTGCTATGTAGACACTGAGGTGGAGATGAAGGAGATCTACACCAGCAATCATATTTGGAAACTCTTTGACAATTTCCTTGCAGATATGGAAAAGGTGTCCGTTGGCCCCACAGACAGGAAACAAGCTGATACATGCCTTGAAAAATACGTCACTGATACGATCATGGCCATCGTCAAGGGCTTCTTCGGCTCGCAGTTCTCTGTCAGCAACTCAAACCTGCAGGCCCATCAAGCAACTTTCATTAAGCTGCTGCAGTCCGCCTGCAGACTTTACAACTGCACCTGGCTCAACTCCCTGCAGAAGACTAACATTGAGGGTTGCATCAAAACCCTTGCTGACGTGGCTAAGAGCCGGGCAATCCCCATTCCAGTGGACCTGGACGGTCAGGTCAATACCCTGTCGCTAAAGACACACACCAGCATGGTGCAGCGCGCAGTGAAGGACTGGAAGCTGTCAACCCGCGGCCGACCCCGTAAGGAGCCCTTTGGGGCCCATGATTACAGGATCATTGAGAAACTGCAGGGAGTCGTTGTGTATCTGGAGGAGCAGTTTAGTCCACAGGTGCAAGCAGAGTTTTCTGTATTAGTAGACGTGCTGCAAAGCCCAGAGATGCTGTTTCCTGAGTCTGCACAGCTCCGCAGCGAGGATGGAGCCTTCATGTCTAAGCTCATCAAACACACCAAGAAGCTGATGGAGAAAGAAGAGAAGCTGTGTATTAAGATCTTGCAGACTCTTCGAGAGATGCTGGATAGGAAAGAAATATTCGAGGAAAAGGGTAACACACTGAGAAAAAGTCTCCTCACACACTACTTTGGCAACCAGTGGCCCCACGCCAAAGCACTGGAGTACAGCAGCGGGAACAGCTCTTCCGCTGGAGGTGGTTCTCCAGGACAGGACTCCGATAAGCCAGGCACTAGCGTAATAGACATCCAGTGTGCTCTGGACAACGTCGGAGCGTCCGAGCTGGTCATCGACCTCATCGTCAGCACTAAGAACGACCGTATCTTTGAGGAGAGCATTTTACTGGGCATTGCACTCCTGAGAGGAGGAAATACACAGATTCAGAACTCTTTCCACCATCAGCTGCACAAACAGAAGAAGTCTGAGAAGTTCTTCAAGGTCTTTTATGATCGAATGGAGTTGGCGCAGAAAGAGATCCGCTCCAGTGTGTCAGTCAACATGTTCGAGCTCAGCTGCaggaagagagaggaggagggtgAGGGCTCTGGCATCAGACATAAAAAAGTCCGAGACTCCTTGCACCTCAGAGAAGACAAGGGTCAGCTTAAAGATGCCTCATCAGTCACCTCCAAAGCCTACAGCATCTTTCGACGGGAAGTGGACCCTGAGATGGAGTCGATGGGATCAGGAGTGGACGGGAtggaggaggtggtggaggagacccAGATGAGCCAGGCCATCACCATCATGAAACCCATCCTACGCTTCCTTCAGCTGCTCTGTGAGAACCATAACAGGGACTTGCAGAACTTTCTGCGAGATCAGAACAACAAAACCAATTATAATCTGGTCTGTGAGACGCTGCAGTTTCTTGATTGTATCTGTGGCAGTACGACGGGAGGACTGGGGCTGCTGGGACTCTACATTAATGAGAGGAATGTGGACCTGGTCAAACAGACACTAGAGACCATCACAGAGTACTGCCAGGGTCCTTGCCACGAAAACCAGTCATGCATCGCCAGGCATGAGTCAAACGGCATTGACATCATCATCGCTCTTATTGTGAATCCAATTGATCCACTGGGGAAGAACCGACTTGACCTTGTGCTGGAGTTGAAGAACAATGCATCTGAACTTCTTCTGGCCATCATGGAAAGTCGTCATGACAGCGAAAATGCAGAGAAGATCCTGTATAAGATGAGACCAAATGAACTGATTGACGTGATCAAGGAGGCTTACGTTCAAGGAGAAGAGAGTGAGATTGATCAAGAGACATTAGATCAAATCAGACCTAAAGATGTTGGCCACAACATCTACATCCTGGCCCATCAGCTGGCACGCCACAGAAAAAACCTCCAGCAGAGTTTGAAACCTGGCCCAGATCCTACCATTGAAGGAGAAGCAGCGCTCCTATACTATGCCAACCACACCGCTCAGATAGAGATCGTCCGCCATGACCGTACGATGGAGCAGATTGTGTTTCCCGTGCCTAACATCTGCGAGTACTTAACAGAAGAATCAAAAGTGCGCGTGTTCACTACAACAGAGCGAGACGACCAGGGCAGCAAGGTCAATGACTTCTTCCAGCAGTTTGATGACCTCTACAATGAGATGAGGTggcaaaagaaaataagaaATAATGCACCACTTTTCTGGGTGTCAAAACATATATCTCTGTGGGGTAGTATCTCCTTTAACTTGGCTGTGCTAATCAACTTGGCTGTCGCTCTTTTCTATCCATTTGGAGATGATGGAGATGAAGgtgtcTTGCCACCATTCTTGTCTATTTTGCTGTGGGTAGCAGTGGTCGTAAGCACCTTCACGTTGTTTGTTCTTCCCCCGCGTGGAGGGATCCTGGCGTTCCTGGTCACCGTCATCTTCCGTTCTATTTACACGCTGGGCTTAGGACCCACACTGCTGCTTCTGGGGGCCGCCAACCTGTTGAATAAAATCGTGTTCCTGGTTAGTTTTGTGGGGAACCAGGGCACATTTACACGAGGTTACAAAGCAGTTATCATGGACGTCTTCTTCCTTCTGCATGTCAGTTACGTCATCGTTTGCACGCTGGGTCTGTTCGTACACGAGTTTTTCTACAGTATCCTGTTGTTTGATCTTGTGCGAAGAGAGGAAACGCTCCTAAACGTGATGAGGAGCGTGACGAAGAACGGCCGCTCCATCTTCCTCACAGCTGTTCTGGCTATCATCCTGGTCTACCTCTTCTCCATTGTGGGCTTCCTCTTCTTTAAAGATGACTTCCTCATGGAAGTCGACCGCCTCCCTGCTATAAAGAGGTTGAATGTAAAGGAGTCTATGAACTGCCTAAGTGAAGGCTGTCCTAACTCCCCTTTTAGTTCTCACCACGaagaggatgaagaCGGTacagagcgtgtgtgtgacaCCCTGCTGATGTGCATCATTACTGTTCTGAACCACGGGCTGAGGAACGGAGGAGGAATCGCAGATGTTCTGCGCAAGCTCTCCAAAGAGGAGCCCATGTTCCCGGCACGTGTCGTATATGACCTCTTGTTCTTCTTCATTGTCATCATCATTGTGTTGAACCTCATCTTTGGTGTGATCATTGACACTTTTGCTGACCTGAGGAGTGAGAAACAGAGAAAGGAAGAAATTCTGAAGACCACCTGCTTCATTTGTGGTCTTGAGAGAGACAAGTTTGATAACAAGACAGTGTCGTTTGAGGAGCACATCAAGTCAGAGCACAACATGTGGCACTATTTGTACTTCCTGGTCTTGGTGAAGGTGAAGGACCCCACAGAGTACGGGCCCGAGAGCCACGTGGCCCAAATGATTAAGGAGAAGAATCTGGACTGGTTTCCGCGGATGAGAGCCATGTCTTTGGTAAGCTCCGAGGGAGAAAGCGAACAGAACGAGATCCGATCGCTGCAGGAGAGGCTGGACACCACCGTGGGTCTCGTGGCTCAGCTTTCTTCCCAGCTGTCCGAGCTTAAAGAACAGATGACAGAGCAAAGGAAGAATAAACAGAGACTGGGCTTCCTGGGACCATCACAGATGAACCATCAGATCCCCCCTGCACACTGAGGACGACTCATCGCacctctccacacacacactcacacacagatgcTGATCTTCACACCATGAACAACACTACACTCATGGTGATCTCACACTTTACATCATGACATGACAGTCGTACGGTTACAACCTACAGACTTGAGCACTGGTTGTGTTTGGGGGCTCACATCAGATGACTTTGTCTTTGGAAAGGctatctgattttttttttttttttttttttttttaaagcatcaagTATTAACTCCCTCACATTTTAATTGTCCTGTCCATAACTGGAGTATTGCTGTAATTCAATGTGCACTTTAGTCTGTGCTGGAATACCTGAAGAGATAAAGTGCCTTCAAACaaattaatagtgttttagaATTCAAATTCACAATTTAATGAAAGATATAAGACTTGGAAATTTTATTGTCTCATAATCAGACAATCGTGTCACCAGTCGTGTCACCTTCTACAAAAACGCTAGTCTTAactctttaaataatgattatttttattgtgtattttatgttgGGGACGTGTCTAGCATATTTGTGCTTGCCTTATACAAAAttgtacagaaaataataaagaatttataTTTGGTATTACAA

Function

symbol description
itpr2 Predicted to enable several functions, including calcium ion binding activity; inositol 1,4,5 trisphosphate binding activity; and inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity. Predicted to be involved in release of sequestered calcium ion into cytosol. Predicted to act upstream of or within calcium ion transmembrane transport. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum; plasma membrane; and secretory granule membrane. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis and isolated anhidrosis with normal sweat glands. Orthologous to human ITPR2 (inositol 1,4,5-trisphosphate receptor type 2).

NR:

description
PREDICTED: inositol 1,4,5-trisphosphate receptor type 2-like isoform X1

GO: NA

KEGG:

id description
K04959 ITPR2; inositol 1,4,5-triphosphate receptor type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264189.1 True 8874 mRNA 0.48 59 24590903 24659950

Neighbor

gene id symbol gene type direction distance location
eea1 LOC107686240,LOC107583815,LOC107672259,LOC107740258 coding upstream 20682 24550432 ~ 24570221 (+)
nudt4a LOC107740279,LOC107672310,LOC107553971,LOC107686239 coding upstream 41523 24535296 ~ 24549380 (+)
ube2na ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding upstream 56395 24527211 ~ 24534508 (+)
LOC122322916 LOC107749305,LOC107686322,LOC107553937,LOC107686321,LOC107553936 coding upstream 68416 24512132 ~ 24522487 (+)
LOC122322915 LOC107553937,LOC107749305,LOC107686321,LOC107686322,LOC107553936 coding upstream 88039 24493933 ~ 24502864 (+)
LOC122362651 bhlhe41,LOC107686242,LOC107553967,LOC107672284,LOC107730473,LOC107583813,LOC107740304 coding downstream 11852 24671802 ~ 24675849 (+)
LOC122362647 ctsd,LOC107686244,LOC107672285,LOC107740314 coding downstream 17710 24677660 ~ 24683938 (+)
LOC122362646 bhlhe41,LOC107686242,LOC107553967,LOC107730473,LOC107672284,LOC107583813,LOC107740304 coding downstream 79075 24739025 ~ 24741360 (+)
LOC122362648 ctsd,LOC107686244,LOC107672285,LOC107740314 coding downstream 84915 24744865 ~ 24751103 (+)
lrriq1 lrriq1,LOC107672332,LOC107740429,LOC107583887 coding downstream 109446 24769396 ~ 24793099 (+)
G128863 si:ch211-219a15.3,LOC107553954,LOC107583920,LOC107740237,LOC107672306,LOC105898028 non-coding upstream 65849 24524527 ~ 24525054 (+)
G128859 NA non-coding upstream 131969 24458719 ~ 24458934 (+)
G128857 arntl2,LOC107749276,LOC107686234 non-coding upstream 145704 24444502 ~ 24445199 (+)
G128856 NA non-coding upstream 147744 24442373 ~ 24443159 (+)
G128841 NA non-coding upstream 150371 24436038 ~ 24440532 (+)
G129038 NA non-coding downstream 4501 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding downstream 7534 24667484 ~ 24669844 (+)
LOC122362654 NA non-coding downstream 75237 24735187 ~ 24737012 (+)
G129115 mgat4c,LOC107553950,LOC107740326,LOC107672194 non-coding downstream 179112 24839062 ~ 24856231 (+)
G129127 NA non-coding downstream 340780 25000730 ~ 25000930 (+)
LOC122323037 NA other upstream 2566 24583845 ~ 24588337 (+)
G128858 NA other upstream 133343 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 854055 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2152224 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2178946 22400944 ~ 22411957 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 634793 25294743 ~ 25309740 (+)
mt2 NA other downstream 686442 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1261317 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 1292380 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 1569144 26229094 ~ 26332010 (+)

Expression


Co-expression Network