lyve1b


Basic Information

Item Value
gene id lyve1b
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 25006079 ~ 25008464 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264198.1
agactcctggaCATTTTTGGTGGCATGTTCTGCAGTCATGGCTAGAGTCTGGTTACAATTATGTCTACCGTTCTTCTTATTTACAAGCGCACTCTGTCTGGATGTGAGTCAAATCCAAGTTCCTACAAACGATGGAATTTCTGGAGTATTGTTAATCCAATCCAACAGCAATGTGTACAGTTTTAATGCCACCGCAGCCAAAGAAGCATGCGAGGCTATTAAAATGAGAATGGCTACAAAGGCTGAAGTAGaaacagcaaacaaaaatgGTTTACAGACATGCAgGTTTGGTTGGGTTGAGGAGCAAATCGCAGTTATTCCTCGAATCGAGAAAAGCgaaaaatgtgctaaaaaccAGTTAGGCGTTTCTGTTTGGAGAGCTGACGTCAGCAAAATGTTTGACGTTTACTGTTTTAAGACAGCAGGTTCTGATGGATCATTTGAAACAACATCAAGCAGGCCTCAATCTACAACAGGAGGAACAATGCCATCAAACAACCATTATTCCACTAAATCAACCCATACATCTTCCATTAGGTCAACCTCTACTCCTGTCTACACATCAAGATCCCTGCCTCCACGTACATCCACTCCATCCGCTTCCTCCTCAGCATTTGTAACATTTCGTCTTTCTAGCATCAGAGACAGTTCCAAAGCAGCAACAAGCACTCAGTCTTTTTCATCTCCAAAAATGTCCTCTGAATTCTCAACCTCATCTTCTTCTGCTTCATCCACTCATTTTCTTCTTCAGCATAGCTCAAATCCAACCGGTCATCCTGCACTGTCCCAGACCGCTATGCCTGACAGACCATCCGCTAGAGcagCTCCCAAAACATTAATCATCACTTCCactgtgttgctgttattgctGGCAGCGGCAGGTGCAGCTTGGTATCTCAAAACTAAAAGACAACTGTTTACATCCTGGTCCAGAATGAGGCAAGAAGAGATGAATGAAACCGAGATgtttaaacgaataaatgagAGGCATTGTACGCCAGAACAGACCAGCAAAGGCAACGACAATAGCAAATGCAACTTCATCCTTAAAATGGAACAAGACTCATCctaaaaatgctgcatttttgtgaaaactacaTTTGGAACtacattttttatcttttttttaggCTGGAAAAAGTGGTCAGATGTTAGCCACTTTATTTTTCGTTTGCTGctcatttaattttcaaatattattttatgttcaaATGTCCATAACGAATGTAAATACTAGTCTATTCATTACGACGCCGTTTTAGTGccaccttcaaaaaaaaaaaaaaaaaaaacaagaataatgTCGAAAGATGTTGATGTTTCAAGAATAAAGCTTAAAGTTATAGCCTAATTTTTTGATATATCCATTTGTGCATACAACTGGTCTGGATAAGGAGCATCGGGGGACATTCCAAAATATATGACATATCGTTGTAATCGCTTAAGATTTTTGgtaattagtaattaatttgtattatttatataaattatgtataattgtatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagtcgcATCAGTGCTAATATTTGAGGATTAAAGGATTAATGTGGCCTACTATTCTTACCTGCTTTGTTGTTAACATATTTTAGGGTGATGTTACCAaggtaataaatgtatgtatgtgtgtgtgttcttacaGCTTGTATGTTAGTAAAGTGAAATCACATCTTAA
>XM_043264199.1
agactcctggaCATTTTTGGTGGCATGTTCTGCAGTCATGGCTAGAGTCTGGTTACAATTATGTCTACCGTTCTTCTTATTTACAAGCGCACTCTGTCTGGATGTGAGTCAAATCCAAGTTCCTACAAACGATGGAATTTCTGGAGTATTGTTAATCCAATCCAACAGCAATGTGTACAGTTTTAATGCCACCGCAGCCAAAGAAGCATGCGAGGCTATTAAAATGAGAATGGCTACAAAGGCTGAAGTAGaaacagcaaacaaaaatgGTTTACAGACATGCAgGTTTGGTTGGGTTGAGGAGCAAATCGCAGTTATTCCTCGAATCGAGAAAAGCgaaaaatgtgctaaaaaccAGTTAGGCGTTTCTGTTTGGAGAGCTGACGTCAGCAAAATGTTTGACGTTTACTGTTTTAAGACAGCAGGTTCTGATGGATCATTTGAAACAACATCAAGCAGGCCTCAATCTACAACAGGAGGAACAATGCCATCAAACAACCATTATTCCACTAAATCAACCCATACATCTTCCATTAGGTCAACCTCTACTCCTGTCTACACATCAAGATCCCTGCCTCCACGTACATCCACTCCATCCGCTTCCTCCTCAGCATTTGTAACATTTCGTCTTTCTAGCATCAGAGACAGTTCCAAAGCAGCAACAAGCACTCAGTCTTTTTCATCTCCAAAAATGTCCTCTGAATTCTCAACCTCATCTTCTTCTGCTTCATCCACTCATTTTCTTCTTCAGCATAGCTCAAATCCAACCGGTCATCCTGCACTGTCCCAGACCGCTATGCCTGACAGACCATCCGCTAGAGCTCCCAAAACATTAATCATCACTTCCactgtgttgctgttattgctGGCAGCGGCAGGTGCAGCTTGGTATCTCAAAACTAAAAGACAACTGTTTACATCCTGGTCCAGAATGAGGCAAGAAGAGATGAATGAAACCGAGATgtttaaacgaataaatgagAGGCATTGTACGCCAGAACAGACCAGCAAAGGCAACGACAATAGCAAATGCAACTTCATCCTTAAAATGGAACAAGACTCATCctaaaaatgctgcatttttgtgaaaactacaTTTGGAACtacattttttatcttttttttaggCTGGAAAAAGTGGTCAGATGTTAGCCACTTTATTTTTCGTTTGCTGctcatttaattttcaaatattattttatgttcaaATGTCCATAACGAATGTAAATACTAGTCTATTCATTACGACGCCGTTTTAGTGccaccttcaaaaaaaaaaaaaaaaaaaacaagaataatgTCGAAAGATGTTGATGTTTCAAGAATAAAGCTTAAAGTTATAGCCTAATTTTTTGATATATCCATTTGTGCATACAACTGGTCTGGATAAGGAGCATCGGGGGACATTCCAAAATATATGACATATCGTTGTAATCGCTTAAGATTTTTGgtaattagtaattaatttgtattatttatataaattatgtataattgtatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagtcgcATCAGTGCTAATATTTGAGGATTAAAGGATTAATGTGGCCTACTATTCTTACCTGCTTTGTTGTTAACATATTTTAGGGTGATGTTACCAaggtaataaatgtatgtatgtgtgtgtgttcttacaGCTTGTATGTTAGTAAAGTGAAATCACATCTTAA

Function

NR:

description
lymphatic vessel endothelial hyaluronic acid receptor 1-like isoform X2

GO: NA

KEGG:

id description
K19012 LYVE1; lymphatic vessel endothelial hyaluronan receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264198.1 True 1739 mRNA 0.37 6 25006079 25008464
XM_043264199.1 False 1736 mRNA 0.37 6 25006079 25008464

Neighbor

gene id symbol gene type direction distance location
eif4g2b eif4g2b,LOC107730533,LOC107569652,LOC107672256 coding upstream 6809 24990583 ~ 24999270 (+)
LOC122323238 NA coding upstream 10129 24995771 ~ 24995950 (+)
nts nts coding upstream 165923 24836247 ~ 24840156 (+)
alx1 alx1,LOC107672210,LOC107740463 coding upstream 204976 24795815 ~ 24801103 (+)
lrriq1 lrriq1,LOC107672332,LOC107740429,LOC107583887 coding upstream 212980 24769396 ~ 24793099 (+)
rnf141 rnf141,LOC107686251,LOC107730548,LOC107672299,LOC107740332 coding downstream 823 25009287 ~ 25013620 (+)
c18h11orf16 LOC107740346,LOC107672206,LOC107686328,LOC107750774,LOC107583884 coding downstream 81731 25090195 ~ 25095673 (+)
si:ch211-242e8.1 LOC107751619,LOC107569663,LOC107583802 coding downstream 90918 25099382 ~ 25103751 (+)
si:ch211-218c6.8 LOC107709518,LOC107686257 coding downstream 98651 25107115 ~ 25108935 (+)
chtf8 chtf8,LOC107569647,LOC107583916 coding downstream 114857 25123321 ~ 25124789 (+)
G129127 NA non-coding upstream 5149 25000730 ~ 25000930 (+)
G129115 mgat4c,LOC107553950,LOC107740326,LOC107672194 non-coding upstream 149848 24839062 ~ 24856231 (+)
LOC122362654 NA non-coding upstream 269067 24735187 ~ 24737012 (+)
G129038 NA non-coding upstream 277100 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding upstream 336235 24667484 ~ 24669844 (+)
G129125 NA non-coding downstream 5286 25013750 ~ 25016984 (+)
LOC122362644 NA non-coding downstream 25654 25034118 ~ 25049605 (+)
G129134 NA non-coding downstream 34624 25043088 ~ 25043820 (+)
G129135 NA non-coding downstream 54990 25063454 ~ 25141859 (+)
G129246 NA non-coding downstream 279679 25288143 ~ 25288537 (+)
LOC122323037 NA other upstream 417742 24583845 ~ 24588337 (+)
G128858 NA other upstream 548519 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 1269231 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2567400 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2594122 22400944 ~ 22411957 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 286279 25294743 ~ 25309740 (+)
mt2 NA other downstream 337928 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 912803 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 943866 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 1220630 26229094 ~ 26332010 (+)

Expression


Co-expression Network