LOC122362692 (LOC107719968,LOC107671151,LOC101886608)


Basic Information

Item Value
gene id LOC122362692
gene name LOC107719968,LOC107671151,LOC101886608
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26300916 ~ 26303177 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264250.1
CCCACAAACACATGATGGCATGCCTATTGGCATTTACTTCCAGGTGGATCTGGAGAAACTTGCAGACTGCAGCGAGTATTTTAAGGCTCTTTCCCACTCCTGCATGAGAGAGACATCTGAACAGCTGGTGCACCTTGAACATGTTCCCTCTCCAGTCTTCCACAACCTTCTACAATTCTGCTTCCTACAGCGGTTCTGTGTTCCTGAAGACTTGTTTGTGGAGCACCTACAGGTGAGCACCTACCTGCTTGCTTCGGGATTCACTGATCGTCTACTGATAGCCCTCTCTCAGACCCTAACGGAGTGCACCTGCTTGGGCTATCTACAGCTGGCTGAGGAACTCTGCAGTGAGGAGCTCCAACAGACTGTGCTAACCTACCTGAGCAAGTACCTACTGGAATATCCACACCTGAGCAAGGGCTTGGATCCACACCTTAAAGCAGAGATTCTCAGATTAAGGTCAAAGGGAAGTCTACACTTATGCTGCTTGAGGAAGGAGAACTTAACCTCAAGGAATGATCCGGAAACAGATGTTGCTAGAAAGCTCTTCAGGCTAGAGGAAGATGGAGATTATGTTAAATGGAGTTCTCTGACAGATCTTCCTTTTTATGCAGATAAGTGGTGCTTCACCACAGCGGTTCTCTATAATTACCTCTATCTCATAGGGGGCTATAGACATCGTGTAAAGAAGGGTTATGAGTTCAAGATGGCTTCCTTCCGCTACAACCCTTTTACCAATCAATGGGTATCAACAGCTCCTCTGATTAAGCACAGGCGTCACTTCAGTGCAGCTGTTTGTGAAGGGAGAATCTTTGCTGTGGGTGGCTGGTATCTGGATTCCCTTGTGACTCCCGACTCCAGTACAGGCGTCTACACTGCTGTGGAGAGGTACGATCCATGGATAGACGCCTGGGAATTTGTTTCATCTCTTCCTCTGACAGACTTCCAGTTCAGCCTGTCCCTTTCCCATGATTCCCCACTCACAACCAGCCTGGGACACTGCCTCTATGTACTGGGAAACATCCAGAGAACTGGAGAAAAACTTGTGCTGCGTTACGATACTACACAAGATTGCTGGTGTGAACTGCTCCCCACACTAACCCGCTCCAGTGCAGACCTCCCCATCCTGCACTTCCTGGGTGCTGCCAATAGTCAATTGGTTGTAATTGGTGGGAATAACTCTGAAACCATGGTGACATCTTTCTGTGTGGACTCTCAAAAGTGGGGCCCTATCAGAGCAATAGAGAAGACCACTTTAATTGGCCAGGGTACCATTCTGCATAACGAGGTCTACATGTCAGGGATGAAGGACAATGCTGTAGTTAAACTGAACCTGCATTCATTGTCCCTCTGTCCTCTTCCTTCACTTCCTGTCACCACCTGCTACGAGAGCCTTTTCCACCTCTACTTCTGACCTTTTTTTCTAGttatacaataaaatgtgaactgaatatttctcattttgtatAAAAGTACACCACTTTGTGAAAACCTGTTATTGTGGAACAATGTTTCTTTGgcataaataaaagtttagttcactccaaaa
>XM_043264251.1
CCCACAAACACATGATGGCATGCCTATTGGCATTTACTTCCAGGTGGATCTGGAGAAACTTGCAGACTGCAGCGAGTATTTTAAGGCTCTTTCCCACTCCTGCATGAGAGAGACATCTGAACAGCTGGTGCACCTTGAACATGTTCCCTCTCCAGTCTTCCACAACCTTCTACAATTCTGCTTCCTACAGCGGTTCTGTGTTCCTGAAGACTTGTTTGTGGAGCACCTACAGCTGGCTGAGGAACTCTGCAGTGAGGAGCTCCAACAGACTGTGCTAACCTACCTGAGCAAGTACCTACTGGAATATCCACACCTGAGCAAGGGCTTGGATCCACACCTTAAAGCAGAGATTCTCAGATTAAGGTCAAAGGGAAGTCTACACTTATGCTGCTTGAGGAAGGAGAACTTAACCTCAAGGAATGATCCGGAAACAGATGTTGCTAGAAAGCTCTTCAGGCTAGAGGAAGATGGAGATTATGTTAAATGGAGTTCTCTGACAGATCTTCCTTTTTATGCAGATAAGTGGTGCTTCACCACAGCGGTTCTCTATAATTACCTCTATCTCATAGGGGGCTATAGACATCGTGTAAAGAAGGGTTATGAGTTCAAGATGGCTTCCTTCCGCTACAACCCTTTTACCAATCAATGGGTATCAACAGCTCCTCTGATTAAGCACAGGCGTCACTTCAGTGCAGCTGTTTGTGAAGGGAGAATCTTTGCTGTGGGTGGCTGGTATCTGGATTCCCTTGTGACTCCCGACTCCAGTACAGGCGTCTACACTGCTGTGGAGAGGTACGATCCATGGATAGACGCCTGGGAATTTGTTTCATCTCTTCCTCTGACAGACTTCCAGTTCAGCCTGTCCCTTTCCCATGATTCCCCACTCACAACCAGCCTGGGACACTGCCTCTATGTACTGGGAAACATCCAGAGAACTGGAGAAAAACTTGTGCTGCGTTACGATACTACACAAGATTGCTGGTGTGAACTGCTCCCCACACTAACCCGCTCCAGTGCAGACCTCCCCATCCTGCACTTCCTGGGTGCTGCCAATAGTCAATTGGTTGTAATTGGTGGGAATAACTCTGAAACCATGGTGACATCTTTCTGTGTGGACTCTCAAAAGTGGGGCCCTATCAGAGCAATAGAGAAGACCACTTTAATTGGCCAGGGTACCATTCTGCATAACGAGGTCTACATGTCAGGGATGAAGGACAATGCTGTAGTTAAACTGAACCTGCATTCATTGTCCCTCTGTCCTCTTCCTTCACTTCCTGTCACCACCTGCTACGAGAGCCTTTTCCACCTCTACTTCTGACCTTTTTTTCTAGttatacaataaaatgtgaactgaatatttctcattttgtatAAAAGTACACCACTTTGTGAAAACCTGTTATTGTGGAACAATGTTTCTTTGgcataaataaaagtttagttcactccaaaa

Function

NR:

description
PREDICTED: kelch-like protein 42

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264250.1 True 1549 mRNA 0.46 3 26300916 26303177
XM_043264251.1 False 1453 mRNA 0.46 4 26300916 26303177

Neighbor

gene id symbol gene type direction distance location
LOC122362626 LOC107672296,LOC107738726,LOC107742880,LOC107686290,LOC107596982,LOC107583769 coding upstream 104528 26191004 ~ 26196388 (+)
hacd3 hacd3,LOC107672296,LOC107738726,LOC107583769,LOC107742880,LOC107596982 coding upstream 356968 25940729 ~ 25943948 (+)
arih1 arih1,LOC107742882,LOC107672283,LOC108423892,LOC107549652,LOC107686289 coding upstream 379941 25906919 ~ 25920975 (+)
LOC122322950 LOC107549654,LOC107576747,LOC107672203,LOC107742895,LOC107686352 coding upstream 398001 25897542 ~ 25902915 (+)
trnal-cag_32 NA coding upstream 403411 25897423 ~ 25897505 (+)
LOC122323090 LOC107710382,LOC107686534,LOC107560047,LOC107719970,LOC107671152,LOC107599867 coding downstream 42835 26346012 ~ 26357471 (+)
G129435 NA non-coding upstream 79893 25967016 ~ 26221023 (+)
G129446 NA non-coding upstream 87572 26212930 ~ 26213344 (+)
G129427 NA non-coding upstream 140497 26160025 ~ 26160419 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding upstream 142414 26156907 ~ 26158502 (+)
G129370 NA non-coding upstream 624055 25676557 ~ 25676861 (+)
G129455 NA non-coding downstream 29049 26332226 ~ 26335988 (+)
G129491 chkb,LOC107686538,LOC107710386,LOC107559534,LOC107719962,LOC107577700 non-coding downstream 76526 26379703 ~ 26380285 (+)
LOC122323030 LOC107719968,LOC107671151,LOC101886608,LOC108264446 non-coding downstream 104612 26407789 ~ 26408862 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other upstream 126760 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other upstream 338335 25952330 ~ 25962581 (+)
mt2 NA other upstream 952322 25346392 ~ 25348594 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other upstream 991176 25294743 ~ 25309740 (+)
LOC122323037 NA other upstream 1712579 24583845 ~ 24588337 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other downstream 710 26303887 ~ 26306806 (+)

Expression


Co-expression Network