LOC122362804 (cmip,LOC107684659,LOC106560887,LOC106573687)


Basic Information

Item Value
gene id LOC122362804
gene name cmip,LOC107684659,LOC106560887,LOC106573687
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 22498257 ~ 22524172 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264389.1
ACGTCACTCCGGTATCACATGAACGAGCCGGGACCAATCCACACGCAGCCCCGTCGAAGCACTCGGTTCCTCCGCCGAGATAGGgaggaaaaaagacagaaaagggAACCATGACTCCGAGCATctgaagaacaaataaaattgaACGCAGCGTGGATTTTGTACCTGGTTGTTTTATATTCGCAGCAGGAAGACTGGAATACTATGCAGCGGAGAGAGACGGAACGGATACGACAATGGCTCGAGCATATTGAATAGCTCGCGACGCTCAAAGGAAAGACATTATACTTCATCGAACCTTCCTCGTCTTGACGGGGTTATTTAATGGCTTCAATCCTCGCCGTCGCCGACCCTTGACTTTTCCGTAACGCTGTTGAGGTCGAGTCACGGTGGATCGCGTGAGCCTCTATATGCCAAACACCGGAACGACCATTATTCGGCCTCGAAATCAAAAGACAGCCACCTGATCTGATTCAACGCCGTCGATTTTCGCTGAGGGGAATCATGGATTTTAACGGGAGCGGCGGGGGAAACGAGCTGCACAACAATCAGTTTTATCCGTCCGAAGAGAGCAAGCCTCTGCTGGGGGAAATGTCCGCACAgcagccgccgccgccgccggaGGGGAATAATAATCACAAAGCGGGGCCCTGCAGCAAGAGGAGCCTTCTACACAGCAGCAGCGGCATGAGATACAAACTGCTCCAGGAGGGGGACATCCAGGTGTGCGTGGTCAAGCACCCGCGGACCTTCCTCAGTAAGCTCCTCACCTCCAAATTTTTACGGAGGTGGGAGCCGCACCACCTCACCTTGACGGACAGCAGCCTGGTGTCTGCCACGCCCACAGGATACATGGAGGCCCCTCTGTCTTACAGCACTATCGAGGACCTACAGCTGTTATCCTGGGACAATGCCCCCAAATACTGTGTCCAGCTAAGCTTCCCCGGAGGGACAGTCCTCCTGCAGGCTGCTAACAGCTATCTACGGGACCAGTGGTTTCACTCGATACAGTGGAAGAAAAAGATCTACAAATACCGCAAGGTTCTGAATAACCCCAGCCGCTGGGACGTGGTTCTGAAGGAGATCAGGGCCCTGGTGGACATGGCCCTCACCTCACCCCTGCAGGACGAATCCATTCATCAGGCTCCACTGCACATCATCTCCACCCTGCTTGCTGAGAACACTAACCTCAGCGCTCAGGACCATGAGAACATCATTGTGGCCATCGCACCCCTGCTGGAGAATAACCACCCTCCCCCTGACCTGTGTGAATTCTTCTGCAAGCACTGTAGGGAGCGTCCTCGATCGATGGTGGTGATTGAAGTGTTCACTCCTGTGGTTCAGAGAATCCTCAAACACAACATGGACTTTGGGAAATGTCCCAGACTTCGTCTCTTTACTCAGGAGTATATTTTGGCTCTGAATGAGCTTAACGCTGGCATGGAAGTGGTCAAGAAGTTCATTCACAGCATGCATGGTCCCACCGGACAGTGCCCTCATCCTCGGGTTCTCCCCAATCTCGTGGCGGTGTGCCTGGCTGCCATCTACTCTTGCTACGAGGAGTTCATCAACAGtcGAGACAACTCTCCCAGTCTCAAGAATCCAAACGGTTGTCAGCAGCAAAGTGAGAGGAAGCCGCCCATGCCTTTGCGTCTGCTGCGGCCTGAGCCGCCCACGCCACCCCCGACCACCACCCTGTCCCCGCCTCCAGCCCTGCCCCTCTCACCACCACCTTCCATCGTCAACTCCAGCGAGATCCTGGTAGAGCTAGAGCGCAACAATAACACCACCAACACACTGCGCAAGGCCCCTGCAGAAGGTGACAGCGAGCCCAACCTGATCGACTGTCTGCTGGTCAGCCCCGCGCTCAATGCCCTGTCCATTCAGCTGCCTGCCCACGCCGACAGAGTGCTGGGATGTTTCGCCCTAATCCTTAAGATGTTATCAGACTATGATGACTGGAGACCAGCACTGGCCAGCCTGCTTCAACCAATCCCCTTTCCGAAAGAGGCCCTTGCACATGCCAAATTCACAAAAGAGCTGAAATATGTTATTCAGAGGTTTGCTGAAGATTCCAGACAAGAGGTCCACTCCTGTTTGCTCAGCGTGCGCTCTGGAAAAGACGGGTGGTTCCAGCTCTACAGTCCAGGAGGCGTAGCTTGCGATGATGACGGAGAGCTGTTTGCTAGCATGGTCCACATCCTCATGGGTTCCTGCTACAAGACAAAGAAATTTCTCCTGTCGCTGGCTGAAAATAAACTGGGACCCTGCATGCTCTTGGCCCTGCGGGGGAACCAGACCATGGTGGAGATCCTGTGTTTGATGCTGGAGTACAACATCATAGAGAACAAGGACACTCAGCTACAGATCATCTCCACCCTGGAGAGCACCCAGGTCGGCCTGCGCATGTACGAGCAGCTGTGCGACAGACAGAGGGAGCTTAAAGAACTGCAAAGAAAAGGAGGCCCTACTCGACTCACTCTGCCCTCTAAATCTACGgATGCTGACTTGGCTCGTCTGCTGAGCTCTGGTTCTTTCGGCAATCTGGAGAACCTCAGCTTGGCGTTTACCAACGTCACCAGTGCCTGCGCCGAACAGCTCATCAAACTGCCATCCCTCAAACAACTCAACCTATGGTCCACCcagTTTGGAGATGCTGGGCTGCGTTTGCTATCGGAGCATTTGGCCTGTCTTCAGGTTTTGAACTTGTGTGAGACTCCAGTCACAGACGCTGGCCTGCTCTCCCTCAGCTCTATGAAAAGCCTGTGCAGTCTGAATATGAACAGTACTAAACTCACAGCGGACACATATGAGGACCTGAAGGCCAAACTACCCAACCTAAAGGAAGTGGACGTTCGCTACACGGAGGCGTGGTGAACTCGAGGAGATTTATAGACGCAGGAAATCGCTGACACATCATCCCAAAACAACATAATCAAGAAACGAGGACTGTATTTATAGGAACATCATGCAAGGACCTTCTGATATCATGAACGCTCAAGAATCATATAGTGTCTCGTCTGAGGACGCTCTTCGCAGTGGCATcgaaatgcaaaaacatgacATCATCAGACGGCACAGGAACCTTTCTAACGATATCACCAGGGGACTTTTTCTCTGTCTTGTTCTCGCCTGACCCCTCAGAGGAACCATGTCCCTCGTTTTAGCCCATAACCGGCGTCCTTTTTCGTCCCTCCAGAAGACA

Function

symbol description
cmip Predicted to be active in cytosol and nucleoplasm. Orthologous to human CMIP (c-Maf inducing protein).

NR:

description
PREDICTED: C-Maf-inducing protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264389.1 True 3205 mRNA 0.53 22 22498257 22524172

Neighbor

gene id symbol gene type direction distance location
si:ch211-260p9.3 LOC107587040,LOC107666218 coding upstream 30998 22452446 ~ 22467259 (+)
LOC122362770 cotl1,LOC107559813,LOC107722478,LOC107684658,LOC107666224,LOC107738394,LOC107587015 coding upstream 77011 22416782 ~ 22421246 (+)
LOC122363070 mical3a,LOC107559327,LOC107673136,LOC107672585,LOC108414616 coding upstream 99021 22374588 ~ 22399236 (+)
LOC122362522 LOC107670367,LOC107559271,LOC107673148,LOC107738440,LOC556054,LOC108414180,LOC108264794,LOC101481124 coding upstream 236288 22241472 ~ 22261969 (+)
ttc38 ttc38,LOC107722483,LOC107673144,LOC107738443 coding upstream 471800 22016312 ~ 22026457 (+)
LOC122362807 srgap1a,srgap1,LOC107670373,LOC108264626 coding downstream 59745 22583917 ~ 22622188 (+)
LOC122362983 hipk2,LOC107722467,LOC107568633,LOC107738404 coding downstream 98952 22623124 ~ 22636865 (+)
tmtc2b LOC107673141,LOC107722480,LOC107670376,LOC107738412,LOC107587029,LOC108414015 coding downstream 144025 22668197 ~ 22762542 (+)
bicd1a bicd1,LOC107722484,LOC107738411,LOC107587026 coding downstream 293185 22817357 ~ 22849043 (+)
fgd4a LOC107722468,LOC107670369,LOC107587027,LOC107684651,LOC107738409 coding downstream 325754 22849926 ~ 22889500 (+)
LOC122363071 NA non-coding upstream 109642 22387599 ~ 22388615 (+)
G128329 tspan9a,LOC107559293,LOC107738414,LOC107587031,LOC107672591,LOC107084745,LOC108414266 non-coding upstream 387799 22109473 ~ 22110458 (+)
G128318 NA non-coding upstream 429304 22033671 ~ 22068953 (+)
LOC122323089 NA non-coding upstream 663236 21694446 ~ 21835021 (+)
G128251 NA non-coding upstream 856628 21638410 ~ 21641629 (+)
G128377 NA non-coding downstream 10294 22534466 ~ 22535424 (+)
G128379 NA non-coding downstream 12603 22536775 ~ 22543533 (+)
LOC122362809 NA non-coding downstream 14210 22538382 ~ 22539895 (+)
G128385 NA non-coding downstream 26273 22550445 ~ 22551614 (+)
LOC122362810 NA non-coding downstream 36219 22560391 ~ 22563204 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 59578 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 86300 22400944 ~ 22411957 (+)
LOC122362661 zgc:77650,arf5,LOC107599973,LOC107559620,LOC108439765,LOC108439842,LOC107599983,LOC103033491 other upstream 1857198 20634845 ~ 20641059 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other upstream 1897738 20589684 ~ 20600519 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other upstream 1941630 20551148 ~ 20556627 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other downstream 932928 23457100 ~ 23736848 (+)
G128858 NA other downstream 1925593 24449765 ~ 24457560 (+)
LOC122323037 NA other downstream 2059673 24583845 ~ 24588337 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 2770571 25294743 ~ 25309740 (+)
mt2 NA other downstream 2822220 25346392 ~ 25348594 (+)

Expression


Co-expression Network