rspry1 (rspry1,LOC107583786,LOC107672266)


Basic Information

Item Value
gene id rspry1
gene name rspry1,LOC107583786,LOC107672266
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 25445589 ~ 25457287 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264489.1
ATGAGTCGGACTTCCCATTACTAACGCCACACAGAGCTTTCATTGAGCTTCAGCTATCTTACGCTGATTTTTGTCAGTCCTTATGCTTTCACTTTTCAGCAAACCGTTTACTTTCATTGTCAAACACCGGCTGGatctgcttttttgtttggATCAGCAAAATGTTGATTACTAAAGtggctgtgtgtgagagtaCGAATCATATCGCTGAgaaataaagcacacacacacttcccgTGTAGTCTTTGTGTTCGGCCTACGGAACAGTGTTGTTGCATTTATCGAAAATCCTCCACTTTACCGGGAGTGAAAACCTCCCAGGCTGTAGGATGCGTGTTGACTGCAGCTTTGCTTGTCTGCCTCTGGCTGCTGATGGCCTGCAGTAGCACAATGACCGACACTTCTATCCGACCCGTACGAAGACACCTTCTAAAGACCTTCCAATGATATGATAGTAGCCACCTGGATTGCATTCTGTGCCAGCAGGAGCCTCGTGCGGGTTCTACGACTCACCGTAGAACAGCTGCAGTCAGTGCAGTTTTGGCCCAGCCTCTTGTCCGGCCGAGCCATGGGGAACAGCTGCGTGTGCAGAGAGGACAGTGACGTGGAGGAGGGATCAGCCCCTCGTAGGCAGCTCAGGCGAGTGGATAACTCTGTGTCTGATCCCCCAGAGGCCAGAGGCAGTCGGCCCAGGGACCCGGTTCGACCGCCCCGGCGAGGTCGAGGACCGCACGAGCCGCGTcggaaaaaacaaaacgtggACGGTTTGGTACTGGACACGCTGGCTGTCATCAGGACTCTTGTTGACAATGACCAAGAGCCACCGTACTCCATGATCACACTACATGAGATGGCAGAGACAGATGATGGCTGGTTGGAAGTGGTGCAGTCTTTAATTAGGGTAATTCCTCTAGATGACCCACTAGGACCAGCCGTTATAACCCTCTTACTGGATGAATGCCCTTTGCCCACCAAAgatgctctgcAGAAGTTGTCAGACATGTTGAATTTGAGTGCTGCTGTGGCGCGTCAGGATGCCCTCATCCCAGCCAAACACCGCAACACCACAGCAGTCCTGGGCTGTCTGGCTGAGAAACTGGCTGGTCCAGCGAGCATTGCACTTCTCAGCCCTGGAACTCTGGAGTATTTACTTGAGAGTTTGAGTTCTGAGGCCCATCCCACTGTAATGCTGTTTGCTCTCATCGCTTTAGAGAAGTTCTCTCAGACCAGTGAGAACAAGTTAACAGTGTCTGAATCGTGTATCAGTGACCGTCTGTCTGTTCTGGAATGCTGGGCAGATCATCCAGACTACCTAAAGCGTCAAGTGGGCTTCTGTGCCCAGTGGAGTCTTGATAACCTCTTCATTAAAGAGGGGCGCCAGTTTACCTATGAGAAGGTCAACTTAAGCAACATCAACGCCATGCTGAACAGTAATGATGTCAGCGAATATCTCAAGATCTCTCCTACTGGACTAGAGGCACGGTGTGACGCATCATCATTTGAGAGCGTCCGCTGTACGTTCTGTGTGGATTCGGGGGTTTGGTACTATGAAGTCACTGTCATCACCTCTGGCGTCATGCAAATTGGCTGGGCGACCAAGGACAGCAAGTTTCTCAACCATgAGGGTTATGGGATTGGAGATGATGAGTACTCATGTGCGTATGATGGCTGCAGGCAGCTGATCTGGTACAACGCTCGCAGTAAACCTCACTCCCACCCCTGCTGGAAAGAAGGTGATGCCATAGGCTTCCTGCTGGACCTTAGTAAGAAGCAAATGATTTTCTATCTAAACGGACACCAGCTGCCTCCTGAGAAGCAGGTGTTCTCCTCCGCCACGTCTGGCTTCTTCGCTGCAGCCAGTTTTATGTCCTACCAACAGTGTGAGTTCAACTTTGGAGCCAAGCCCTTCCGCCATCCCCCCTCCATCAAATTCAACACATTTAATGAGTTTGCCTCGCTCGCATCAGATGAGAAAATCATTTTGCCCAGACACAGGCGCCTGGCTTTGCTTAAGCAAGTTAGCATCAGAGATAACTGCTGCACCCTCTGTTGTGACCAGATGGCAGACACTGAACTGAGACCCTGTTTGCACAGTGGGATTTGCATGGAGTGTGCCTTACAGCTGGAAACGTGCCCACTGTGTCGCCAAGACATCCAGACACGAGTCAGACTCATTTCCCATGTCTCCTGACATCAGCCCACCAACTCTAGATGTGGACTATCCCCATTCAAGCTTCCATCCTGTCCAGTCCCCTCTGTCTGAGAGATCAACCTGACCAATCAATTCATAATGCTGTCTCAGGATTGGACACGGCAGTGTGGACCTCTGACGGATGGAGTAGACCCTCCTTACAACTGGAGGgaaagagagtgaaagagagaaaactaCACTGTTGCACTCCAAGGATGCCCCACTCTGAGGGCTATTGAAGATACCAGGAGGTTTAAGGCATTCTGGGAATTTTTCATCTGGCTTTCCAAGAGTAGATAAAATATGGAACAAATGCATCTATTACATACTGATATGTCTCTCCCCTCAAGCTCTGGTCTGCTGTATGTCTCTGTTCAgatgtgttatatatatgtggcttttttttttttatattccaaGTTAGTTTTAGCAGGAAACGGCAGCAGTGTCTTAACCACTTTGTTTCCTCTAAATGTTCATACCTGCCTCATTATTATTCCGCTCCCTCAGACTGATTGTACTTGAATCTGTTCTGGGTTGATTGCCCCACATTCTAAATACGATTGCAAAATGTCTTGATGAATCAAGacactgtgatttatttttattattatttttttgttttttttttaaacagtattttttattgatgtatGATGCAAGGtccatttagaaataaatgaagccAAATTAAGTTaggtaaaatgacaaaactgagTGAGAATTGACTATCAGAGTAAAAGGCGTCCCTCAAATGACGTTTGGGGAAATGTCATGTGTTTTCTGCCATGGTTAATGCACATATCAGTGTCCTAATGCTGCTGATGCTAAATGTGAACTTTCTGAAGCAGTTAAAGAGACTAAAATCTCCAATGCTCCCAAAGATAAGAGAGTATGATTGAATTAAGAATCTTTCATTTTCTGAATTGTgatgtttgtaataaatgtctgttttatgtGTTGCA
>XM_043264490.1
TGCCTACGTAGGCAACTCACTATGGTTTGAGACGCAACCATAGAGACTCAAGTTTATTGACGCTAATTTACTGAAATGACAGCGTGCTGTTTATAAGCTTTCAGAGGGAGTGAAAACCTCCCAGGCTGTAGGATGCGTGTTGACTGCAGCTTTGCTTGTCTGCCTCTGGCTGCTGATGGCCTGCAGTAGCACAATGACCGACACTTCTATCCGACCCGTACGAAGACACCTTCTAAAGACCTTCCAATGATATGATAGTAGCCACCTGGATTGCATTCTGTGCCAGCAGGAGCCTCGTGCGGGTTCTACGACTCACCGTAGAACAGCTGCAGTCAGTGCAGTTTTGGCCCAGCCTCTTGTCCGGCCGAGCCATGGGGAACAGCTGCGTGTGCAGAGAGGACAGTGACGTGGAGGAGGGATCAGCCCCTCGTAGGCAGCTCAGGCGAGTGGATAACTCTGTGTCTGATCCCCCAGAGGCCAGAGGCAGTCGGCCCAGGGACCCGGTTCGACCGCCCCGGCGAGGTCGAGGACCGCACGAGCCGCGTcggaaaaaacaaaacgtggACGGTTTGGTACTGGACACGCTGGCTGTCATCAGGACTCTTGTTGACAATGACCAAGAGCCACCGTACTCCATGATCACACTACATGAGATGGCAGAGACAGATGATGGCTGGTTGGAAGTGGTGCAGTCTTTAATTAGGGTAATTCCTCTAGATGACCCACTAGGACCAGCCGTTATAACCCTCTTACTGGATGAATGCCCTTTGCCCACCAAAgatgctctgcAGAAGTTGTCAGACATGTTGAATTTGAGTGCTGCTGTGGCGCGTCAGGATGCCCTCATCCCAGCCAAACACCGCAACACCACAGCAGTCCTGGGCTGTCTGGCTGAGAAACTGGCTGGTCCAGCGAGCATTGCACTTCTCAGCCCTGGAACTCTGGAGTATTTACTTGAGAGTTTGAGTTCTGAGGCCCATCCCACTGTAATGCTGTTTGCTCTCATCGCTTTAGAGAAGTTCTCTCAGACCAGTGAGAACAAGTTAACAGTGTCTGAATCGTGTATCAGTGACCGTCTGTCTGTTCTGGAATGCTGGGCAGATCATCCAGACTACCTAAAGCGTCAAGTGGGCTTCTGTGCCCAGTGGAGTCTTGATAACCTCTTCATTAAAGAGGGGCGCCAGTTTACCTATGAGAAGGTCAACTTAAGCAACATCAACGCCATGCTGAACAGTAATGATGTCAGCGAATATCTCAAGATCTCTCCTACTGGACTAGAGGCACGGTGTGACGCATCATCATTTGAGAGCGTCCGCTGTACGTTCTGTGTGGATTCGGGGGTTTGGTACTATGAAGTCACTGTCATCACCTCTGGCGTCATGCAAATTGGCTGGGCGACCAAGGACAGCAAGTTTCTCAACCATgAGGGTTATGGGATTGGAGATGATGAGTACTCATGTGCGTATGATGGCTGCAGGCAGCTGATCTGGTACAACGCTCGCAGTAAACCTCACTCCCACCCCTGCTGGAAAGAAGGTGATGCCATAGGCTTCCTGCTGGACCTTAGTAAGAAGCAAATGATTTTCTATCTAAACGGACACCAGCTGCCTCCTGAGAAGCAGGTGTTCTCCTCCGCCACGTCTGGCTTCTTCGCTGCAGCCAGTTTTATGTCCTACCAACAGTGTGAGTTCAACTTTGGAGCCAAGCCCTTCCGCCATCCCCCCTCCATCAAATTCAACACATTTAATGAGTTTGCCTCGCTCGCATCAGATGAGAAAATCATTTTGCCCAGACACAGGCGCCTGGCTTTGCTTAAGCAAGTTAGCATCAGAGATAACTGCTGCACCCTCTGTTGTGACCAGATGGCAGACACTGAACTGAGACCCTGTTTGCACAGTGGGATTTGCATGGAGTGTGCCTTACAGCTGGAAACGTGCCCACTGTGTCGCCAAGACATCCAGACACGAGTCAGACTCATTTCCCATGTCTCCTGACATCAGCCCACCAACTCTAGATGTGGACTATCCCCATTCAAGCTTCCATCCTGTCCAGTCCCCTCTGTCTGAGAGATCAACCTGACCAATCAATTCATAATGCTGTCTCAGGATTGGACACGGCAGTGTGGACCTCTGACGGATGGAGTAGACCCTCCTTACAACTGGAGGgaaagagagtgaaagagagaaaactaCACTGTTGCACTCCAAGGATGCCCCACTCTGAGGGCTATTGAAGATACCAGGAGGTTTAAGGCATTCTGGGAATTTTTCATCTGGCTTTCCAAGAGTAGATAAAATATGGAACAAATGCATCTATTACATACTGATATGTCTCTCCCCTCAAGCTCTGGTCTGCTGTATGTCTCTGTTCAgatgtgttatatatatgtggcttttttttttttatattccaaGTTAGTTTTAGCAGGAAACGGCAGCAGTGTCTTAACCACTTTGTTTCCTCTAAATGTTCATACCTGCCTCATTATTATTCCGCTCCCTCAGACTGATTGTACTTGAATCTGTTCTGGGTTGATTGCCCCACATTCTAAATACGATTGCAAAATGTCTTGATGAATCAAGacactgtgatttatttttattattatttttttgttttttttttaaacagtattttttattgatgtatGATGCAAGGtccatttagaaataaatgaagccAAATTAAGTTaggtaaaatgacaaaactgagTGAGAATTGACTATCAGAGTAAAAGGCGTCCCTCAAATGACGTTTGGGGAAATGTCATGTGTTTTCTGCCATGGTTAATGCACATATCAGTGTCCTAATGCTGCTGATGCTAAATGTGAACTTTCTGAAGCAGTTAAAGAGACTAAAATCTCCAATGCTCCCAAAGATAAGAGAGTATGATTGAATTAAGAATCTTTCATTTTCTGAATTGTgatgtttgtaataaatgtctgttttatgtGTTGCA

Function

symbol description
rspry1 Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in proteolysis involved in cellular protein catabolic process. Predicted to be active in cytoplasm. Orthologous to human RSPRY1 (ring finger and SPRY domain containing 1).

NR:

description
RING finger and SPRY domain-containing protein 1-like

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K23332 RSPRY1; RING finger and SPRY domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264489.1 True 3156 mRNA 0.47 15 25445589 25457287
XM_043264490.1 False 2959 mRNA 0.47 15 25446379 25457287

Neighbor

gene id symbol gene type direction distance location
cpne2 cpne2,LOC107583787,LOC107740309,LOC107672324 coding upstream 8816 25417863 ~ 25436773 (+)
nlrc5 nlrc5,LOC107580006 coding upstream 32332 25394882 ~ 25413257 (+)
LOC122362468 cetp coding upstream 51348 25389034 ~ 25394241 (+)
herpud1 herpud1,LOC107686272,LOC107549637,LOC107740310,LOC107672290 coding upstream 57729 25381708 ~ 25387860 (+)
slc12a3 slc12a3,LOC107740340,LOC107583876 coding upstream 64446 25371705 ~ 25381143 (+)
si:ch211-216l23.2 LOC107549641,LOC107740307,LOC107583785,LOC107672316 coding downstream 711 25457998 ~ 25464103 (+)
znf423 si:ch211-216l23.1,LOC107738741,LOC107583782,LOC107740334,LOC107672235,LOC107549642 coding downstream 13787 25471074 ~ 25612128 (+)
si:ch211-212o1.2 si:ch211-212o1.2,tmem189,LOC107738740,LOC107740306,LOC107672277,LOC107583780,LOC108264382,LOC106560866 coding downstream 156926 25614213 ~ 25639371 (+)
cbln1 cbln1,LOC107549644,LOC107583779,LOC106573707 coding downstream 199357 25656644 ~ 25662430 (+)
n4bp1 n4bp1,LOC107549646,LOC107738738,LOC107743359,LOC107583777 coding downstream 314848 25772135 ~ 25782486 (+)
G129270 fam192a non-coding upstream 3148 25440048 ~ 25442441 (+)
G129262 NA non-coding upstream 96551 25348756 ~ 25349038 (+)
G129246 NA non-coding upstream 157052 25288143 ~ 25288537 (+)
G129135 NA non-coding upstream 303730 25063454 ~ 25141859 (+)
LOC122362644 NA non-coding upstream 395984 25034118 ~ 25049605 (+)
G129360 NA non-coding downstream 205210 25662497 ~ 25663585 (+)
G129368 NA non-coding downstream 217784 25675071 ~ 25675310 (+)
G129370 NA non-coding downstream 219270 25676557 ~ 25676861 (+)
G129435 NA non-coding downstream 509729 25967016 ~ 26221023 (+)
G129438 arih1,LOC105007423,LOC107738728,LOC107686289 non-coding downstream 699620 26156907 ~ 26158502 (+)
mt2 NA other upstream 96995 25346392 ~ 25348594 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other upstream 135849 25294743 ~ 25309740 (+)
LOC122323037 NA other upstream 857252 24583845 ~ 24588337 (+)
G128858 NA other upstream 988029 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 1708741 23457100 ~ 23736848 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 463980 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 495043 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 771807 26229094 ~ 26332010 (+)
G129468 cpt1b,LOC107710383,LOC107686536,LOC107599889,LOC107671150 other downstream 846600 26303887 ~ 26306806 (+)

Expression


Co-expression Network