LOC122323166


Basic Information

Item Value
gene id LOC122323166
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19487570 ~ 19568485 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006246958.1
AATTCAGGCGACGGTGTCAATGCCAATACACTTCCGGTGTTTCTTCTCAACAGCGACAGGCACTCAAATGACTCCTGCCATTGGGTTGTCCTCCCTTTACAAGCCTCGACAGAGCCCACCAGAAGGACAGACGGACGGACGGGCACATAATCATGATCTGATTTTTGCAAGACAAGGTTGGCACCTTGGTGATGCGTAGGACAACCGGTATGGCGCAGTAATTGGCTGCTCGTCGTGACATCGACTCGGCTGCTACCCGCGGAGAGAGCCAAAACACCCACACGATTTCTCCAATCAAACACGGAGCACGCTGGAGATCGGCTGAGGATTATTTCATTAAAGCCGTAATCCCCTCCGAAGCGTCTAGGAGacATGAATGACAGAGGAGTGTCAAACCAATTGGCAAGAACATCATCGAGCTTTAAATGGGCTCTTCTGACTTGGACCGtcatggATTTTCTAGAAGCTGTCAAGAACGTGATGTGCAGACTGATACCTACTGCATCAGATTGACTCGAACGAGTTCAGACCTGATAAAGAATCCAACTAAATGCAGAAGCTTCGGCGAAGACTTCTTTTCAGAGGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006246958.1 True 588 lncRNA 0.49 5 19487570 19568485

Neighbor

gene id symbol gene type direction distance location
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding upstream 36359 19404321 ~ 19451211 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding upstream 98907 19380035 ~ 19388663 (+)
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding upstream 828830 18654618 ~ 18658740 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding upstream 941263 18544363 ~ 18546307 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding upstream 964006 18519991 ~ 18523564 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding downstream 31527 19600012 ~ 19603818 (+)
LOC122362762 LOC101886557 coding downstream 55727 19624212 ~ 19625612 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding downstream 316649 19885134 ~ 19901478 (+)
LOC122323160 LOC107561070,LOC107686623,LOC107705778,LOC107601073,LOC107662868,LOC103036982 coding downstream 334661 19903146 ~ 19908222 (+)
LOC122323153 LOC107662863,LOC107736036,LOC107686605,LOC107561064,LOC107600739,LOC107705761 coding downstream 359741 19928226 ~ 19935759 (+)
LOC122323165 NA non-coding upstream 7349 19452530 ~ 19480221 (+)
LOC122362700 NA non-coding upstream 139091 19330322 ~ 19348479 (+)
G127492 NA non-coding upstream 794339 18690565 ~ 18693231 (+)
G127460 NA non-coding upstream 913216 18573819 ~ 18574354 (+)
G127439 NA non-coding upstream 940847 18502441 ~ 18546723 (+)
G127617 NA non-coding downstream 7404 19575889 ~ 19576159 (+)
G127630 NA non-coding downstream 54528 19623013 ~ 19623282 (+)
G127632 NA non-coding downstream 57668 19626153 ~ 19626521 (+)
G127637 golim4,LOC107662907 non-coding downstream 213280 19781765 ~ 19924802 (+)
G127663 NA non-coding downstream 417256 19985741 ~ 19991636 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 199014 19269611 ~ 19288556 (+)
G127500 NA other upstream 646035 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 835406 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 924418 18559963 ~ 18563152 (+)
G127292 NA other upstream 1347317 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 434519 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 499193 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 977507 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 982663 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 1021199 20589684 ~ 20600519 (+)

Expression


Co-expression Network