LOC122362654


Basic Information

Item Value
gene id LOC122362654
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 24735187 ~ 24737012 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006253144.1
CCAGGAACAGCAGCACTGGTCTCGTGAGGACTGAACTTGAGATGCCAGAGCACACGGAGATGTTCTCTGATCCGCCTTATCGCTCTAATTTGCAACATGACACCCCCAGTGACGATTCTCGTGAACTCaagttataaatTATGGCGGTGTGGCCAATGGATCCGATACGAGACGGCCTCATGCGTGGCCCCAAAAGAGTAAACAAGGCATGCTGGGAGTTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006253144.1 True 223 lncRNA 0.52 3 24735187 24737012

Neighbor

gene id symbol gene type direction distance location
LOC122362647 ctsd,LOC107686244,LOC107672285,LOC107740314 coding upstream 51249 24677660 ~ 24683938 (+)
LOC122362651 bhlhe41,LOC107686242,LOC107553967,LOC107672284,LOC107730473,LOC107583813,LOC107740304 coding upstream 59338 24671802 ~ 24675849 (+)
LOC122362645 itpr2,LOC107672258 coding upstream 75237 24590903 ~ 24659950 (+)
eea1 LOC107686240,LOC107583815,LOC107672259,LOC107740258 coding upstream 164966 24550432 ~ 24570221 (+)
nudt4a LOC107740279,LOC107672310,LOC107553971,LOC107686239 coding upstream 185807 24535296 ~ 24549380 (+)
LOC122362646 bhlhe41,LOC107686242,LOC107553967,LOC107730473,LOC107672284,LOC107583813,LOC107740304 coding downstream 2013 24739025 ~ 24741360 (+)
LOC122362648 ctsd,LOC107686244,LOC107672285,LOC107740314 coding downstream 7853 24744865 ~ 24751103 (+)
lrriq1 lrriq1,LOC107672332,LOC107740429,LOC107583887 coding downstream 32384 24769396 ~ 24793099 (+)
alx1 alx1,LOC107672210,LOC107740463 coding downstream 58803 24795815 ~ 24801103 (+)
nts nts coding downstream 99235 24836247 ~ 24840156 (+)
G129038 NA non-coding upstream 6208 24664451 ~ 24728979 (+)
LOC122362653 NA non-coding upstream 65343 24667484 ~ 24669844 (+)
G128863 si:ch211-219a15.3,LOC107553954,LOC107583920,LOC107740237,LOC107672306,LOC105898028 non-coding upstream 210133 24524527 ~ 24525054 (+)
G128859 NA non-coding upstream 276253 24458719 ~ 24458934 (+)
G128857 arntl2,LOC107749276,LOC107686234 non-coding upstream 289988 24444502 ~ 24445199 (+)
G129115 mgat4c,LOC107553950,LOC107740326,LOC107672194 non-coding downstream 102050 24839062 ~ 24856231 (+)
G129127 NA non-coding downstream 263718 25000730 ~ 25000930 (+)
G129125 NA non-coding downstream 276738 25013750 ~ 25016984 (+)
LOC122362644 NA non-coding downstream 297106 25034118 ~ 25049605 (+)
G129134 NA non-coding downstream 306076 25043088 ~ 25043820 (+)
LOC122323037 NA other upstream 146850 24583845 ~ 24588337 (+)
G128858 NA other upstream 277627 24449765 ~ 24457560 (+)
cdh13 cdh13,LOC107722459,LOC107684661,LOC107587012,LOC107738387,LOC107666219,LOC107553949 other upstream 998339 23457100 ~ 23736848 (+)
G128367 LOC107722471,LOC107738392,LOC107587041 other upstream 2296508 22434806 ~ 22438679 (+)
LOC122363143 LOC107722468,LOC107587027,LOC107670369,LOC107684651,LOC107738409,LOC107559800,LOC107705337,LOC107658950,LOC107584024,LOC107656390,LOC107718551,LOC107590534 other upstream 2323230 22400944 ~ 22411957 (+)
kiaa0513 zgc:91860,LOC107583795,LOC107740318,LOC107686269,LOC107738753,LOC107549630 other downstream 557731 25294743 ~ 25309740 (+)
mt2 NA other downstream 609380 25346392 ~ 25348594 (+)
G129424 LOC107738763,LOC107549607,LOC107686336,LOC107742881,LOC107583870 other downstream 1184255 25921267 ~ 26174156 (+)
slc24a1 LOC107596980,LOC107738725,LOC107686291,LOC107672236,LOC107742879,LOC107583763 other downstream 1215318 25952330 ~ 25962581 (+)
G129454 frmd4a,si:ch211-220f12.1,LOC107719967,LOC107599825 other downstream 1492082 26229094 ~ 26332010 (+)

Expression


Co-expression Network