LOC122362700


Basic Information

Item Value
gene id LOC122362700
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 19330322 ~ 19348479 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006253152.1
TGTCCCTCAGCTACTCTATCTTCCTCCATCTTCTTGATTCTCTCACAGTACACCTGTTTATTCTCTAACCATCTTCActctttttcccttttcctcGGGCTAAACTCAAACATCATTGcgagagaagaaaacaaacccGGCGTCTGACTGCTGCATGGTGCTCTCGAATTGGACTGGTGGTCTACAGCTGTCCTTTTTGTCATTTCGGTATGGAAATCAGCCCATGCAGCAAATGCAAACTTGGAACAAGTGACGTTAATCCACCTTGTGCCGTCATGACTGATACtaaccagccaatcagaaaaggCCTCTAGGTGGGGCTTTATGTTGCATGCGTCAGTGCATTGTGAAAGAATAAAGGTATCCTGTCGTCGACCCTGCCCACGCGCAGAGCTAGATTGCCCGCTGCAGGCAGAGCGCGGGAAGACAAGGCGCGGGAAGCGCGCGCGGTAGAATTCTCCTCAGCCGTCTTCGCTGCAGATAAAACCAAACTAAATTTATACAGAGGAAAAGTAAATAGACTTATTAGATTGTTTCGTTTGTGATTTCGCCGCGTTAAGCCGAGGAACCGCGGACTCGCATTTCAACGAACGAAGTGACATTTTC

Function

GO: NA

KEGG:

id description
ko04723 Retrograde endocannabinoid signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006253152.1 True 606 lncRNA 0.48 3 19330322 19348479

Neighbor

gene id symbol gene type direction distance location
LOC122323077 LOC107600293,LOC107660691,LOC107735981,LOC107658864,LOC107594385 coding upstream 671582 18654618 ~ 18658740 (+)
aamdc aamdc,LOC107658908,LOC107660681,LOC107600309,LOC107600345 coding upstream 784015 18544363 ~ 18546307 (+)
aqp11 LOC107659225,LOC107715828,LOC107594401 coding upstream 806758 18519991 ~ 18523564 (+)
hcn4 hcn4,LOC107658947,LOC107715829,LOC107553361,LOC107668476,LOC107594389 coding upstream 869513 18393603 ~ 18460809 (+)
LOC122362573 LOC107668478,LOC107715830,LOC107658962,LOC107594373,LOC107553363 coding upstream 943392 18339199 ~ 18386930 (+)
slitrk3a slitrk3,LOC107570382,LOC107705787,LOC107735288,LOC107600237 coding downstream 31556 19380035 ~ 19388663 (+)
LOC122323148 LOC107735994,LOC107660689,LOC107755676,LOC107687769,LOC107600770,LOC107572113,LOC107570700 coding downstream 55842 19404321 ~ 19451211 (+)
LOC122362761 LOC107686603,LOC107662910,LOC107600197,LOC107735331 coding downstream 251533 19600012 ~ 19603818 (+)
LOC122362762 LOC101886557 coding downstream 275733 19624212 ~ 19625612 (+)
serpini1 serpini1,LOC107705789,LOC107735309,LOC108410963 coding downstream 536655 19885134 ~ 19901478 (+)
G127492 NA non-coding upstream 637091 18690565 ~ 18693231 (+)
G127460 NA non-coding upstream 755968 18573819 ~ 18574354 (+)
G127439 NA non-coding upstream 783599 18502441 ~ 18546723 (+)
G127443 clns1a,LOC107594388,LOC107579082 non-coding upstream 801980 18527129 ~ 18528342 (+)
G127434 NA non-coding upstream 811861 18491997 ~ 18518461 (+)
LOC122323165 NA non-coding downstream 104051 19452530 ~ 19480221 (+)
LOC122323166 NA non-coding downstream 139091 19487570 ~ 19568485 (+)
G127617 NA non-coding downstream 227410 19575889 ~ 19576159 (+)
G127630 NA non-coding downstream 274534 19623013 ~ 19623282 (+)
G127632 NA non-coding downstream 277674 19626153 ~ 19626521 (+)
LOC122323181 LOC107600247,LOC107735268,LOC107660675 other upstream 41766 19269611 ~ 19288556 (+)
G127500 NA other upstream 488787 18730690 ~ 18841535 (+)
LOC122323076 p2ry2.1,LOC107594365,LOC107658870 other upstream 678158 18646362 ~ 18652164 (+)
G127456 rps3 other upstream 767170 18559963 ~ 18563152 (+)
G127292 NA other upstream 1190069 18138535 ~ 18140253 (+)
wdr59 wdr59,LOC107686576,LOC107662905 other downstream 654525 20003004 ~ 20015706 (+)
zfhx3a si:ch73-386h18.1,LOC107705798,LOC107686574,LOC107564894,LOC107735402,LOC107662901,LOC107600168 other downstream 719199 20067678 ~ 20093601 (+)
glipr1b glipr1b,LOC107733273,LOC107560107,LOC107662866,LOC107601008,LOC107736196 other downstream 1197513 20545992 ~ 20549357 (+)
si:dkey-30c15.17 LOC107686550,LOC107559644,LOC107733274 other downstream 1202669 20551148 ~ 20556627 (+)
terb1 LOC107710377,LOC107686590,LOC107559931,LOC107662840,LOC107600507,LOC107736230 other downstream 1241205 20589684 ~ 20600519 (+)

Expression


Co-expression Network