CI01000001_05814686_05836203


Basic Information

Item Value
gene id CI01000001_05814686_05836203
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5814646 ~ 5837238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05814686_05836203.mRNA
GTATAAAAGGTTTCGGACTCCACACTGATCAGAGAGAGCGATGGGTGACTTTAAAGATAGTGTTACTGCAGCTGCAATCAACCTGGCAGATGATGCCCCATGGAAAAAGATACAGAAGAACACCTTCACACGCTGGTGCAATGAACACCTGAGGTCTGTGGAGCTGCAGATCAGCGATCTTAAGTTTGATCTGAGCGATGGCCTTGTCCTTATTTCACTGCTGGAGGTCCTGAGCCATAAGAGGATGTTTAGAAAGTACCACACGCGACCCACCTTCAGACAGCTCAAGCTAGACAATGTTTCGGTGGCTCTGGAGTTTTTGGATCATGAAAAGGTTAAGTTGGTGTCTATAGACAGTAAGGCCATAGTGGATGGGAATTTGAAGCTGATCCTGGGTCTAGTTTGGACCTTGATACAGCATTACTCCATTTCCATCCCAGTGTGGGAGGATGAGGCAAACGATTCTGTCTCCAAACTGACTCCAGAGATGAGGCTTCTGGGATGGATCCAAAACAAAGTCCCTGAACTGCCTATCACTAACTTCAGCCAGGACTGGCAGGATGGCAAGGCCCTGGGTGCATTAGTGGATGGACTGGCACCAGGCTTGTGTCCTGACTGGGAGAGCTGGGATACAGTGCATCGGGTGAGCAACACTAAAGAAGCCATGCAGCAAGCAGATGACTGGCTTGGAATTCCACAGCTCATAGCCCCAGAGGAGATTCTTGATCCAGCCGTGGATGAGCAGTCAGTGATGACGTATCTCTCACTTTTCCCCAAAGCCAGACTGAAACCTGGAGCCCCACTCAAGCCAAAGAAAGTGCCAAAACCCAAAACCTGTCGTGCCACAGGTCGGGGATTGCAGTCTAAAGGCATGAGAGTAGGTCAGCTGGCCGAATTTAAAGTGGACACCTGCAAAGCTGGGCCTGGAAATCTGGAGGTCCTTATTAGAGACCCTAGTGGCAAAGCAGTGTCTGTCAGACAGAAGGATGCACTTGAAGGTGTTTATACCTTTGAATATACACCCACTGCTAAAGGAGATCACACAGTGGACATCACCTGGGCTGGTCAGCACATTGCCAAGAGCCCATTTAAAGTCCATGTTGGTTCAGAAGCTGGTCCACAGAAGATCCGAGCATGGGGACCAGGATTGGAGGGAGGGACTGTGGGCTTGTCAGCAGATTTCTTGGTGGAATCTGTAGGTGTGGACTCTGGCATGCTGGGTTTTGCCATTGAAGGTCCATCTCAGGCAAAGATTACATGTGATGACCACAATGATGGCTCCTGCCTTGTGCGGTTCTGGCCGACTGAGGCCGGTGAGTATGCTGTACACGTAATGTGTGATGATGAAGAAATCCAGGACAGTCCCTTTATGGCTTCCATCAGACTTAAAAGAAAAGACTTCCACCCTGAAAAGGTGAAAGTAGAAGGACCCGGTGTTTCCCAAACTGGGTGCATAGTGAACCTCCAAACCCAGTTCACTGTAGATACCAGGCAAGCTGGTGAAGGAGAACTTAAAGTTTGTGCTCAGAGAGCAGATGGAGAATGTGTAGATGTTAGTGTTGCCTCTGAACAATCTGGTGTCTTTGTCTGCTCCTACATCCCTTCATCTCTCTCCAAACATACCATTTCTGTGGCTTGGGGAGGAGTCATGGTTCCTGGCAGTCCTTTCATTGTGACACCCCGCAGGATTAAGATGACACTGTGTAGTCCAGTCTGGTTTAAACCAGATGGATCAGAAATGTGTTACTCTGATGAAGAGATGGACCTTGATGAAGACTTTCCAGACAACGTATGGCCTGGTGGTCATGGAGAACTTGTTATGAACATAATCAGCCCGTCAAACGTCCCAGGCGATGCCACAAAGGTAAGGGCTCATGGTCCAGGCCTAAAAGAAGGTGTTCTTGGAGAACAGGCAGAGTTTAACATTGACACAAGCAGAGCAGGCAGTGGACAACTTGCCATAAGAGTGGACGGACCCTGTGAAGTTACACTAAAATGTCTGGACAATCAAGATGGCACTTGTACAGTGTTTTACCTCCCCACAGAGCATGGAGTGTACAAAATAAATGTCCTTTTTGACAACTCTCACATAACTGGCTCTCCATTCAAGGCTGTTATACAGAAGCCAATTGACCCATCTAAAGTTTTGGTAACAGGCCCTGGTCTGCTACAGGGGAAAGTCGGGGAACCTTGCATTGTAAATATAGATTGTGCAATGGCAGGATCTGGAGATCTGTCTGTGCAGGCTGTCTCTGACTCAGGAGTCATTGTCCCAACCGAAGTGAAGGAGAATGAAGATGGCACATACACAGCTGTTTATGTGCCTCTAACTGGAGGCGTGTATACGCTGCTTTTGAAATATGGAGGAAAGGTGGTGCCCAACTTCCCTGCTAAAGTTGTTGTGGATCCAAAGGTCTACAAAAGCCATGTAAAAGTGAGCAGGCAAGGAGGTATTGTGGTTGGTGAAAGGGAAACTGACACATGCCAAGTTGTTGCAGATGGTTTAGGTCTCCAAAAGGGCCTCGCTGGACATCCTAATATGTTTAGTGTAAACGCCAGATCTTCAGTTGATGATCTGGGTATAACAGTGGAGGGTGCATCTGAGTGTCAGATGACATGCAAAGACAACGGTGAAGGCTTGTATAATGTGGAATATACTCCTTCAGTTCCTGGTGAATATAAGATCACCATTACCTGTGGAGAGAAAAACATTCCAGAGATCAAATACAATGGAGATGGGATTTACACAGCGAGTCCAGCTCCATCAATGGAAGACAGAGAGTCTCTCATAGATCCTCAGAGTCCTTATGGAAGCAGCAGAGAGCTTCCCTCAGCTCATGGTGAGAATATGGCAGAGATTATTGTTCCAGGTTTTAAAGGTAGAATCTGCGGTAGAACTTCCCAAACTTTTACGATTGGCTGCAGTAGCAATGGAGAAGCACCTGAAACTGTTGCTGTGGTGAGAACTGATGGCTCCATGGAGCTCCTTGAGCTGAAAAAAAGTGGAGATGGCACTTATAGCGTTGTCTATTTGCCCACCATGGATGGCTGTCATTTATTAACAGTGAAATTCTCTAAAGAGGAGACTTTTAATAGTCCTTTCGAGTTTCGAGTGCTGCCTATGCCTGATTCCGATTATAAGCATCATGTAGGTCATGGCTTGAGGACTCCAGTTTTTGGATTAGATTTAGAGGCACAGCTGTGTGTAAACACTCCTCAGACCTTCACAATTGATGGTAGTAGCACCGGAGAGCCACCAGAGACTGTAGCTGTTGTTACACCTGATGGCAAAATCAGGGATGAAGATGTCTTGAATAAAGAGGAACATTCCAGTCAGGAGGGAAGTGTCAATAGCAATGCTAAGGCTCCTCAAACATCCGCTAACAGCTACAGTGTGGCACCAGAGACTGACACCATAGTGACAGCTAATGATGTGATGGGCAACAGGGACAGAACTTGCAAGATGACTTGCGCACCAAATACAGAAAATTCTGTGATGGACAAATATGCCAGTGAAGAGGCTTTAAGAAGCCTCTCTGAGTTCCAGGCAGACTTAACTGTTGAAAATACAGAGCCAAAGATTTGTACTCAAATTCCTCAGTCATTCAAAATCAACTGTAGTAAATCTGGGAAGCCGCCTGAGTGTGCGCTGATGATCACCCCCAATGGAAAAGCTGAACTGACAGAGGTCAAAGAAAACCCAGATGGGAGTTACTCTGTGAAATATTCTCCCACCGTAGAAGGTCTTCACTCTTTGATGGTCAAATATGCTGATGATGATTCATACTGCAATCCATTGAGGTTTCATGTCTTGCCTCACTCTGCTAGTGATGATGAGCATGGGATAAATACAACTGAGGTTTGTAGACAATTAAAGGAAGATGTCTGTGCTCAAATTCCTCAAACTTTCACAGCTTGCTGCAACACTAATGAGGCCCCAGAGACTGACATGTCGAAAGCTGATGGCACTAGAGATCTGGTTGGAGTGTTAAATAATGAGAACAGGACCTATGCAGCAACACACACACTCTCTGCTGAAGACTCGCACTCCTCAGCTGACAGAAATCCCAGTGAGGAGGATTTTCAGAGTCACCAGCCATCATCCTCACACGCTTCAAACAGTCACATAGGTTTTCAAAACAAGGCTGACGGCAGAACTGTAATTCCTCTTGGTGCCATTAATCAAGCAGGGTTTATATCCTGTGATATAGTCCTGCCATCAGACTTAAGTGAAGGTGAAATTACAGGTGAGGTGATCACACCGTCTAGAAAGACAACACAGCCTGACGTGACTGATAACAAAGACGGTACCATCATTATAAAGTTTGATCCTTTAGAAGAAGGTCTTCACCAACTACTTATTAAATCGTCCGGAAACGATCTACCAGTACTTCCACTGCAGTATTATGCAAATAGTCTTGCTAATCGCAGCACGATGGCCTATGGACGTGGCCTTGTGTATGGAATTGCAAATGAGACGGCAACATTCACCATCTGTCAGGAGGATTCAGCCTTGAGTGATCTGGACATCACAATCGAGGGTCCATCTGAGGCAGATGTGCGCTGCTTGGACAATGCAGATGGCACTTGTACTGTGAGCTACCTCCCAACTGAGCCTGGAGATTATGAGATCCAAGTTCACCACAATGACATGCCTATCCAAGATGGAAATATGAGAAGGTCACAGGTAAAACTGGGCAGTGCTGTTGACTTCACCATCAACGTCACTGAAGAAGACATTAGCCAGCTCACTGCCAGCATCATATCACCCACAGGCAATGATGTACCCTGCTTACTGAAAACACAACCTGACAGCCATCTCGGTGTATCATTCATCCCCAGAGAGGCTGGTGAGCATCTGGTCAGCATCATGAAGGACGGTGAGCATGTGGGCAACAGTCCCATCTCTCTTTCCATCAGTCAGGCAGAGATAGGAGATTCCAGCAAGGTGAAGGCTTTCGGCCCAGGCTTACATACAGGGCACACCTTCTGCATGTCTGAATTTGTGGTGGACACTTGGGATGCAGGATATGGTGGGCTAACGGTTGTAATTGAAGGTCCCAGTAAAGTAGATGTTCACACTGAAGAGATGGAGCATGGAACGTGCAATATATCGTACCACCCAATCAAGGCTGGGACCTACAAAATCTCCATTAAATTTTCAGATGAGCACATTCCAGGGAGTCCTTTTACAGCTGTGATAACAGACCGTGGACTTATGAGAGAGAACATCATGTACAAACAGAAAGCAGCTCCTATTGCCAGCATTGGGAGTGAATGCAGCTTAGCCTTTAAAATCCCAGGTACTGATGCTGAGACCCTGTCTGCACACATCTATGAACCATCAGGAACTCAAGGAGAGGCTGTTATTGTTGCTACAGGCAGTGACACCTATGCAGTGAGCTTTCTAGCGAAAGAGATTGGAGTTTATAATGTAACCATAAAGAACCAAGGCCAGACAATCTCTGGCTGCCCACTCCAGTACACTGTCGGCCCACTTGGACAAGGAGGATGTGAAAGGATCCAGGTGTGGGGACAAAGCCTTCAGACAGCTCTGGCAAGTGTTCCAGCTGACTTTAATATTTGGTCCCGTGAGGCCGGAGCAGGAACTCTGTCTGTCTCAGTAGAGGGTCCTGGAAAGATTGAGCTCCACTTTGATGATCGGCTGGATGGTTCTTGCATTGTGTCCTACACAGCACAAGAGCCTGGTGACTATGAGGTTTCAGTCATGTTTAATGAGGAGCATATTTCCGAAAGCCCATTCCTTGTGTCTGTCAGTGCTGCCACAGATAAAAGTCTCACACAAGGACAAAGTGGCTCTGATCATAATCAGATGTGTAACAGTTACGAGGAACCCTCTCAGTCAGAGTTGGAGATAAACATATCATCTGACAGCAGTGCTGAGCCAGTTTTCCTGTCTAACGCTAGTAAAGTCATCTGCCATGGCCCAGGCCTGAGTAAGGGCATTCTAGGACGCAAAAACACTTTTTATGTGGACTGCAGTAAAGCTGGACAAAACCTTCTCTTTGTCGGCATGCATGGCCCCACTGTCCCCTGCGAACGGTTGTCGATCATTCACATGGGCGGACATCAGTACAGGATCAACTATGCCATAAAGGAAAGGGGAAAGTACATATTAGCAGTGAAGTGGGGAGATGAGCATATTCCTGGATCTCCGTTCCATATTAGTGTTCTATGAAATGCATTAATCTATGTATGTGTGTACATCACTACCGTTCAAAAGTTTTGGCATGGTAGGATTTTTGTGTTTTTGAAAGAAGTCTGCATACATTTGAGCAAAAATACAGTAAAAACAGTAATATTGTGAAGTATTATTACAATTTAAAATTACTTTTTTGTATTATTATATATTTTAAAATATAATGTAATATTGTGATGCAAAGCTGAATTTTCAGCATTATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGCTACTCAAGAAACATTTACTATTATTTTCAATGTTGAAAACAGTTGTGCTGCTTAATATTTTTCTGCAAATTGTGATTTGTTTTTTTGTTTTTTTGTTTTTTTCAGGAATCTTTGATAAATAGAAAGTCTAATAGAACAGCATTTATTTGAAATACTTTTTTTGTGACGATGTAAAAGTCAAATTAATGGCCTTTCTCAATAAAATTATTAATTTCTTTATATATCTTACTAAACCTAAACCTTTAAATGGTAGTGTACACTCAGTATGGAAAAAAAAAAAAACTTTTTTAAATGTTATAAATAATTATGTATATAATTATAGTAATAAATTATTATATAAATAATATTATAAATATAATTATAATAAATACATAACATATATAATAAATATATATAAGTATTATTTTTTAAAAACATATTATCATTCTCCTCAGATAGAATCCTTTATATTTTTTCACTATATTTAATGCAAAACTAAATTGAATGCCTGGTTAAAATCACACATTTGAATTTCAACTCTGAACAAATGTGAATTGGTTTTCATAACTTTGCTCACATGCAGTGATGCTTGTGCACATCTGGAGGATTTCACTTTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTGTAAGCAGTCACCATAAATGTGATACAAGCATAAATGCACCTAAATGGCTTTAAATGTTAAATGGAATTAATATGCAAAAAAATGTGATATAAAATTTTTATTAATCCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05814686_05836203.mRNA False 7234 mRNA 0.43 39 5814646 5837238

Neighbor

gene id symbol gene type direction distance location
CI01000001_05803416_05809184 SLMAPB coding upstream 5340 5803416 ~ 5809306 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding upstream 14812 5795264 ~ 5799834 (+)
CI01000001_05734513_05735964 NA coding upstream 78633 5733121 ~ 5736013 (+)
CI01000001_05689002_05702184 NA coding upstream 111962 5688655 ~ 5702684 (+)
CI01000001_05587090_05591952 APOBEC2B, APOBEC2 coding upstream 222508 5587090 ~ 5592138 (+)
CI01000001_05838017_05841551 ABHD6B coding downstream 779 5838017 ~ 5841683 (+)
CI01000001_05842665_05846705 KCTD6B, KCTD6, KCTD6A coding downstream 5427 5842665 ~ 5846924 (+)
CI01000001_05861486_05864311 NA coding downstream 24207 5861445 ~ 5864604 (+)
CI01000001_05883364_05897204 NA coding downstream 42337 5879575 ~ 5897214 (+)
CI01000001_05902661_05905496 NA coding downstream 65132 5902370 ~ 5905786 (+)
G16071 NA non-coding upstream 28952 5785342 ~ 5785694 (+)
G16060 NA non-coding upstream 56240 5756362 ~ 5758406 (+)
G16027 NA non-coding upstream 105263 5709181 ~ 5709383 (+)
G16026 NA non-coding upstream 107181 5707255 ~ 5707465 (+)
G16025 NA non-coding upstream 107542 5706778 ~ 5707104 (+)
G16080 NA non-coding downstream 34368 5871606 ~ 5871892 (+)
G16084 NA non-coding downstream 39795 5877033 ~ 5877272 (+)
G16090 NA non-coding downstream 48552 5885790 ~ 5886041 (+)
G16112 NA non-coding downstream 171001 6008239 ~ 6009382 (+)
G15995 NA other upstream 99695 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 524690 5279837 ~ 5287698 (+)
G15794 NA other upstream 749942 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2193195 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4143642 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 1695334 7531541 ~ 7540586 (+)
G17234 NA other downstream 2194886 8032124 ~ 8032483 (+)
G17353 NA other downstream 3378784 9216022 ~ 9228859 (+)
G17354 NA other downstream 3397225 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 3581090 9435836 ~ 9436373 (+)
CI01000001_05581818_05584137 NA coding upstream 135795 5581818 ~ 5584621 (+)
CI01000001_05579315_05580553 CCDC115 coding upstream 139713 5579315 ~ 5580703 (+)
CI01000001_05565644_05568075 NA coding upstream 151928 5565644 ~ 5568488 (+)
CI01000001_05933655_05938581 FLNA coding downstream 67311 5933655 ~ 5939241 (+)
CI01000001_05942155_05943721 NA coding downstream 75811 5942155 ~ 5944019 (+)
CI01000001_05960289_05963221 NA coding downstream 92005 5958349 ~ 5963343 (+)
G16024 NA non-coding upstream 14230 5705884 ~ 5706186 (+)
G16023 NA non-coding upstream 15955 5704249 ~ 5704461 (+)
G16131 NA non-coding downstream 190795 6057139 ~ 6057348 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021617 flnb coding NC_007134.7 CM002907.2 19606291 ~ 19652915 (+)