CI01000001_05838017_05841551 (ABHD6B)


Basic Information

Item Value
gene id CI01000001_05838017_05841551
gene name ABHD6B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5838017 ~ 5841683 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_05838017_05841551.mRNA
GGAGCTTACTAGATAAATCCAGAGTTGCCATGGATCAGGATATGGTGAATATGTTTGCCATTGCTGCAGGGACTCTTGCTATCCCTCTCCTCCTTTTCATGGCCTCCTTTATGCTGTGGCCATCATCGCTCATCAAAATCTATTACTGGTACTGGAGGAGAACTCTGGGTCTGCAGGTACGTTATGCAGACTGCGGAGGTTATCGCTTCTGTTACTCGCACAGGGGCAAACCAGGCCTCAGGCCCTCTATACTCATGCTGCATGACTTCTCTGCTCATAAGGACACATGGCTCCCCATGGTGAAGTACCTTCCCAAACATCTGCACCTGCTGTGTGTCGACATGCCAGGGCATGAGGGGACAACACGTACCAGTACGGATGACTATTCAATCCAGGGCCAGGTCAAGAGAATACGGCAGCCAGCATATTACATGTTTGTGTTGGCAGCATTTATGAATATTCCCTACTTTTACACCACTCAGTTTGTAGAGGCCATTCGACTAAACAGAAAGCCGTTCCACCTGGTGGGGACTTCAATGGGTGGCACTGTGGCAGGAGTGTATGCAGCCTGCCATCCCTCAGATCTCTACAGTTTGACCCTCATCTGCCCAGCCGGTCTGAAGAACCAAAACGAGAGCAAGTTTGACTGTCAGATGCATGATGTTGAGCACAGCCAGTACACCCTGAATATTCCTCTTATTCCATCCACCCCGGAGGAGATGGAGGAGATGCTGAAGCTCTGTTCTCACGTGCGCTTCAGAGTGCCTCAACAGGTGGTGGATGTGTCTGGCGCAGCGGTGCTTGCCGAGGCTCTTCCGCACTGCCGTGTTGATCTGCTGGAGAACTGCGGTCATTCTGTGGTCATGGAGCGACCGCGACAAACAGCCAAGCTCATTTTAGATTTCATCATCTCTCAGCAGAACACAGAAAGCGCCAGCACAAAGAAGAAATCCTGAGACGTCTCTGCTATCAACTGTATTTTGCTTATCAAATGCAGCACCCCACTGACCCTGAAGTATATATATAACAAACTTAGGGAGAAATTATATTCATAGTAATAATTTTGCAGTGTTTTTCAGTTTGATTGA

Function

symbol description
abhd6b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ABHD6 (abhydrolase domain containing 6, acylglycerol lipase).

NR:

description
Zgc:162889 protein

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_05838017_05841551.mRNA True 1088 mRNA 0.49 6 5838017 5841683

Neighbor

gene id symbol gene type direction distance location
CI01000001_05814686_05836203 NA coding upstream 779 5814646 ~ 5837238 (+)
CI01000001_05803416_05809184 SLMAPB coding upstream 28711 5803416 ~ 5809306 (+)
CI01000001_05795264_05798555 ATP6AP1LB coding upstream 38183 5795264 ~ 5799834 (+)
CI01000001_05734513_05735964 NA coding upstream 102004 5733121 ~ 5736013 (+)
CI01000001_05689002_05702184 NA coding upstream 135333 5688655 ~ 5702684 (+)
CI01000001_05842665_05846705 KCTD6B, KCTD6, KCTD6A coding downstream 982 5842665 ~ 5846924 (+)
CI01000001_05861486_05864311 NA coding downstream 19762 5861445 ~ 5864604 (+)
CI01000001_05883364_05897204 NA coding downstream 37892 5879575 ~ 5897214 (+)
CI01000001_05902661_05905496 NA coding downstream 60687 5902370 ~ 5905786 (+)
CI01000001_05933655_05938581 FLNA coding downstream 91972 5933655 ~ 5939241 (+)
G16071 NA non-coding upstream 52323 5785342 ~ 5785694 (+)
G16060 NA non-coding upstream 79611 5756362 ~ 5758406 (+)
G16027 NA non-coding upstream 128634 5709181 ~ 5709383 (+)
G16026 NA non-coding upstream 130552 5707255 ~ 5707465 (+)
G16025 NA non-coding upstream 130913 5706778 ~ 5707104 (+)
G16080 NA non-coding downstream 29923 5871606 ~ 5871892 (+)
G16084 NA non-coding downstream 35350 5877033 ~ 5877272 (+)
G16090 NA non-coding downstream 44107 5885790 ~ 5886041 (+)
G16112 NA non-coding downstream 166556 6008239 ~ 6009382 (+)
G15995 NA other upstream 123066 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 548061 5279837 ~ 5287698 (+)
G15794 NA other upstream 773313 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2216566 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4167013 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 1690889 7531541 ~ 7540586 (+)
G17234 NA other downstream 2190441 8032124 ~ 8032483 (+)
G17353 NA other downstream 3374339 9216022 ~ 9228859 (+)
G17354 NA other downstream 3392780 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 3576645 9435836 ~ 9436373 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021618 abhd6b coding NC_007134.7 CM002907.2 19655301 ~ 19667758 (+)