LOC122323779


Basic Information

Item Value
gene id LOC122323779
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12118492 ~ 12119894 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217884.1
GCCCATGAGTTCTTGCTGGTTTGCCTGTCTCACCTTAAAGAGGAGGGCGAGTTTCTGCGAAGCTGCTGGCCCACATACACCTGCCCAGTAGCTAACATGGAGTTTCAGCTCAACCGCCTTCTCACCTGCAACAGCTGTGGTTTCCAGAGGAGCTTTACAGAGGATTCCAACTACCTCTCTCTGGTGATCAGTCCTCAAAGAAGCCTCACTCACAGCCTGGAGCAGTACTTCAAAACATCTTCGTTGGACTGCTCATGCAGTGAGTGTGCTGGCGCGACAGCTTCTGAGGCCCTGGAATTAGTTACCTGTCCACGGATCCTGGTGCTTCTGGTGATGCGTTTTGACATAACATCGTCAATGAAGAAGCTGAAAGATAAACTGGAAGTTCCACAAGAGTTTTCACTGTCCTGTAGTACAGGTGGAAGAATCAGACAGCAGGACACTGTATAAACTAGCTGGTGTCGTGTCACATATGGGCAGCAGTTTGTATTGTGGGCACTACATCAGTTATGTCCATGACGGATCTGAATGGCTTAAATGCAGTGACAACTCCATCAAAAAATCCAGCTGGACAAAGGCTTCaaaaaaaataggaaagaaTGGCTACATGCTCTTCTACGTGAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217884.1 True 627 mRNA 0.48 6 12118492 12119894

Neighbor

gene id symbol gene type direction distance location
LOC122323873 NA coding upstream 7665 12109556 ~ 12110827 (+)
LOC122323773 NA coding upstream 19594 12097091 ~ 12098898 (+)
LOC122323872 NA coding upstream 33661 12081248 ~ 12084831 (+)
LOC122323780 NA coding upstream 40662 12076581 ~ 12077830 (+)
LOC122323766 NA coding upstream 47636 12068332 ~ 12070856 (+)
sfpq LOC107722137,LOC107669930,LOC107566770,LOC107706594,LOC107558579,LOC107655760 coding downstream 1501 12121395 ~ 12139784 (+)
LOC122323754 zmym4,LOC107669919,LOC107566774,LOC107655758,LOC107706586 coding downstream 25859 12145753 ~ 12163878 (+)
LOC122323753 LOC107566772,LOC107722138,LOC107655757,LOC107706592 coding downstream 45191 12165085 ~ 12184252 (+)
rbm48 LOC107670247,LOC107722129,LOC107566766,LOC107548761 coding downstream 66747 12186641 ~ 12190024 (+)
cdk6 cdk6,LOC107567973,LOC107722162,LOC107667775,LOC107558583 coding downstream 97071 12216965 ~ 12245745 (+)
G132305 NA non-coding upstream 3138 12114759 ~ 12115354 (+)
LOC122323790 NA non-coding upstream 4747 12112991 ~ 12113745 (+)
LOC122323789 NA non-coding upstream 11822 12105788 ~ 12106670 (+)
LOC122323793 NA non-coding upstream 14679 12103312 ~ 12103813 (+)
LOC122323788 NA non-coding upstream 25262 12091760 ~ 12093230 (+)
G132311 NA non-coding downstream 70844 12190738 ~ 12192364 (+)
G132301 NA non-coding downstream 77783 12197677 ~ 12199695 (+)
G132318 NA non-coding downstream 127650 12247544 ~ 12247745 (+)
G132317 NA non-coding downstream 128877 12248771 ~ 12249423 (+)
G132376 NA non-coding downstream 258379 12378273 ~ 12397361 (+)
LOC122323774 NA other upstream 5595 12111279 ~ 12112897 (+)
LOC122323782 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 594611 11522229 ~ 11523881 (+)
zgc:91910 zn706,LOC107556412,LOC107574718,LOC107710523,LOC107670289,LOC104962755,LOC108425704 other upstream 1700396 10415640 ~ 10418096 (+)
triqk triqk,LOC107724370,LOC107710222,LOC107702072 other upstream 2364936 9734220 ~ 9753556 (+)
G131801 trib1,LOC107724318,LOC107565192,LOC107702074,LOC107710180,LOC107556392,LOC107653840 other upstream 2479531 9636973 ~ 9638961 (+)
gngt1 gngt1,LOC103023645,LOC108257427,LOC107085869 other downstream 303396 12423290 ~ 12425078 (+)
jtb jtb,LOC107706175,LOC107591609,LOC107731414,LOC107593543 other downstream 901523 13021417 ~ 13026026 (+)
sdc3 LOC107697058,LOC107696563,LOC107593566,LOC107742841,LOC107706193,LOC107591629 other downstream 1189533 13309427 ~ 13336749 (+)
G133066 ext1c,LOC107654729,LOC107706241,LOC107592050,LOC107754264,LOC107592945,LOC107688378 other downstream 2667650 14787544 ~ 15212430 (+)
LOC122323257 tpmt,tpmt.1,LOC107591974,LOC107688424 other downstream 2714707 14834601 ~ 14837969 (+)

Expression


Co-expression Network