| Item | Value |
|---|---|
| gene id | ptprk |
| gene name | LOC107653136,LOC106607755,LOC106571353 |
| gene type | coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 295938 ~ 428897 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase kappa-like isoform X3 |
| id | description |
|---|---|
| K06776 | PTPRK; receptor-type tyrosine-protein phosphatase kappa |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_043218930.1 | True | 5677 | mRNA | 0.53 | 36 | 295938 | 428890 |
| XM_043218931.1 | False | 5669 | mRNA | 0.53 | 36 | 295938 | 428891 |
| XM_043218933.1 | False | 5665 | mRNA | 0.53 | 35 | 295938 | 428890 |
| XM_043218934.1 | False | 5658 | mRNA | 0.53 | 35 | 295938 | 428889 |
| XM_043218935.1 | False | 5653 | mRNA | 0.53 | 35 | 295938 | 428890 |
| XM_043218936.1 | False | 5646 | mRNA | 0.53 | 35 | 295938 | 428889 |
| XM_043218937.1 | False | 5628 | mRNA | 0.53 | 34 | 295938 | 428889 |
| XM_043218938.1 | False | 5614 | mRNA | 0.53 | 36 | 295938 | 428890 |
| XM_043218939.1 | False | 5595 | mRNA | 0.53 | 35 | 295938 | 428889 |
| XM_043218940.1 | False | 5595 | mRNA | 0.53 | 35 | 295938 | 428889 |
| XM_043218941.1 | False | 5587 | mRNA | 0.53 | 35 | 295938 | 428890 |
| XM_043218942.1 | False | 5576 | mRNA | 0.53 | 34 | 295938 | 428888 |
| XM_043218943.1 | False | 5568 | mRNA | 0.53 | 34 | 295938 | 428889 |
| XM_043218944.1 | False | 5564 | mRNA | 0.53 | 34 | 295938 | 428888 |
| XM_043218945.1 | False | 5552 | mRNA | 0.53 | 33 | 295938 | 428888 |
| XM_043218946.1 | False | 5546 | mRNA | 0.53 | 33 | 295938 | 428888 |
| XM_043218947.1 | False | 5527 | mRNA | 0.53 | 32 | 295938 | 428887 |
| XM_043218949.1 | False | 5534 | mRNA | 0.53 | 35 | 295938 | 428897 |
| XM_043218950.1 | False | 5515 | mRNA | 0.53 | 32 | 295938 | 428887 |
| XM_043218951.1 | False | 5497 | mRNA | 0.53 | 31 | 295938 | 428887 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| themis | themis,LOC107653154,LOC107757674,LOC107740538,LOC107660546,LOC107554148,LOC107576180 | coding | downstream | 135 | 287735 ~ 295803 (-) |
| si:dkey-126h10.1 | si:dkey-126h10.1,LOC107757668,LOC107653135 | coding | upstream | 22980 | 451877 ~ 458866 (-) |
| arhgap18 | arhgap18,LOC107660538,LOC107740524,LOC107653144,LOC107560483 | coding | upstream | 184778 | 613675 ~ 638556 (-) |
| med23 | med23 | coding | upstream | 438822 | 867719 ~ 905091 (-) |
| gjb7 | gjb7,cx28.8,LOC107563147,LOC107569825,LOC107709909,LOC107576048 | coding | upstream | 592733 | 1021630 ~ 1025274 (-) |
| LOC122324736 | syncrip,LOC107709954,LOC107563155,LOC107675091 | coding | upstream | 619953 | 1048850 ~ 1058048 (-) |
| G135010 | LOC107565037,LOC107653137,LOC107757675 | non-coding | downstream | 9379 | 282902 ~ 286559 (-) |
| G135035 | NA | non-coding | upstream | 104718 | 533615 ~ 604306 (-) |
| G135036 | NA | non-coding | upstream | 176337 | 605234 ~ 606164 (-) |
| G135067 | NA | non-coding | upstream | 181845 | 610742 ~ 611218 (-) |
| G135185 | NA | non-coding | upstream | 271642 | 700539 ~ 709031 (-) |
| G135195 | NA | non-coding | upstream | 302989 | 731886 ~ 732431 (-) |
| tmem244 | tmem244 | other | upstream | 214674 | 643571 ~ 650357 (-) |
| epb41l2 | epb41l2,LOC107717037,LOC107560489,LOC107697498,LOC107653142,LOC100380760,LOC107711607 | other | upstream | 324670 | 753567 ~ 822510 (-) |
| G135237 | NA | other | upstream | 509268 | 938165 ~ 965395 (-) |
| G135276 | NA | other | upstream | 673808 | 1102705 ~ 1103113 (-) |
| G135275 | NA | other | upstream | 674409 | 1103306 ~ 1105818 (-) |