si:dkeyp-117h8.4 (LOC107683988,LOC107555746,LOC107721277,LOC107737307,LOC107556154)


Basic Information

Item Value
gene id si:dkeyp-117h8.4
gene name LOC107683988,LOC107555746,LOC107721277,LOC107737307,LOC107556154
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13412653 ~ 13416257 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220418.1
TCGGTTTTTTTCTCGCAAAAAATTTGAAAGTCCAGCTTTCAAAATTTGAAAGTTTAAAGGTTGCTGAGTGCAAAAATCGACCTATGCCGGTCAAATAAATTAGTTAGCAATATATATTGTTACTGCATCATGTCTGCAAATCATTTATATGCCGATCAATTCAAGAGAAACGACGATGTGTTCAGAAACGCGATGGAAGCTATTTTTCAGAAGTATTCTAGTCTAAATGATCCTGGGATAGACGTCTGCCTGAAAACAATGACCTGCAAGACTGGTAGAGGTCCTGTGCCCATTGACAGTGTAGAGGGAGAACGTGAGTTGGAAGCATTAAAGACTCGAGTTAAAGCTGACTATTCAACAATGAGGGagTTTGAGGACCAGGAAAATTATCAgTTTCAGATGGATGTGTCAGGGGTCACAGAGGATGATCTTAATGGCTCGGGTCAAAAGGAAAACACGGAAAATCTGTGGCACGGAGGTGAATCAGTCCTCCAGTCCATGATTCTGAATAACACACCTCCTGAATCTGTGTGGGCTGAGCTGTCTCCACCtgaagaagaggatgaagaaCTGGAGAAAACACTGAGTAGCCATGGCAGTACCCTCCTGGATGTCTATCCCAGCATGCTCAACCAGATCGGTGAAGCATACCGGCGACAGCATGTGACTGACACAGCGAGGGCCGTGGTGCAGAAGTACCGCCGCAAACACTGGCAAGCCAGCCCGAGGCATCGCAACACATCCTTTAACAACAGACACAATTACACTCTAAACAAAACAGCAGAGATCTCCTTTACCAGTCAAAGTCCAGTTCAAAGAAACATTAGCCACTGTTTCAAGAGCAGTGACCAACTTGAACATTTGCTAAAGAACAAACCAAGGTCTACTCCGCTCAAAAATGTATCCTGCGAGGCCAGTGCCTGTTTTTACTCACCCAGGAGGAACTGTGCGGATGTGAGCGGTGTGACGGATGAGTGTCCATGGACTTTAAGCAGTAAACCTGCGCGTGTGATTGACTTGTCCACACCTCCACATTCAGAATCCCTCTCATTTAGTGACCAATCTCCAGATCTGGACCAAACATATGATGTTGGGCCAACATCTCATGCTGTTCCAGCCTCATCGGTCCTTAGCTCTCCTCGACATAGCAGAGCAGATCTGTCTCTAATTGACCAGAGAGGAATATCGGTCACCTCCCGACCTTTCTCATTGGACAAAGACTGTTTAAGGGACCGCATAACCTCTCCTGTCTATTCCCCGCAGCGCAGTCTCATTGGTGTTTTGTCTCCTAGTGGGAAAAGTGGTTCCAGACCTAGTATGCTGAGCAAAGAAAGGCAATTGAATACAACAGCAAGTCTGAAGCGAAGGTCTCCTGTCCACCATCTATCCCATTCTGTGGTCCTCCGATCTCCTTATGGTGTCAAACCGGTTCCGTTGTCCTCACCTATTTATGACCGAAGCTTATCCAAAGTGGAGAAACCATCCCATTTTACTCTCTCCAACCGCCAACGCTCTCTTTCTGGCCCCCAGTCCACGTGCTCATTCAGCGAACCGCAGATTGATGCAGAGTTCAGAAGGCTGTATCACCACTTCATCTGTCGTGGCACATCATCACCGTGTCCTTCCTCCCAGTGTCACCTGTGTGAGAAACGCATAAAGGAGACGACCCGAAGCCCCAGCTTTTCCTCCTCCAGCATGTCCGCTCTCGCTCTGACACCCCTGAGGGCCAAGCTCAAGAAACGCCGGCGTCAGCCTGAAGTGGAAGAGTCACTCCGATTCAAACGTTTCCGAGAGAGTCGTTCTCCACTGAAGCATCTCCAGCTGAGAGACCAATATATGAGCCCTGGCTTGTCAGAACCTACTGAAGACAAACACACCTGGGATAGAGCCGTCCTGCTGCAGTGCCCTAGTCCACGGTTCCTCAGGGGCACCGGAAACCTCAGGAGAATCAGGGAGGCTAAATTAAGCATGCAAATGAACCCACGTGCTTTGCCTTGGAGAGATGCCCCAAGTGGAGTCAATCCAGTGGAGGcTGTGTCACCCATGAGACTCTTTAATCAGGGTACCTCTCCACTCTCTCCTAGTCTCTCCAGGAGGCGGCTGCAGTACAGTTTTGTGCCATGAGCTTTCCTGAATGCATCCCACACCCTGCCTGTTAACCTTTGTGGgacaaactgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatatacaatgacTATATAAAGTTTACCCTAGTGAAAAAACATGGGATGACATGTGTAGACACAATGCTTAAAAATCAGTAGTCCTGTttactttttga

Function

NR:

description
mucin-5AC-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220418.1 True 2314 mRNA 0.48 10 13412653 13416257

Neighbor

gene id symbol gene type direction distance location
paics paics,LOC107683924,LOC107721365,LOC107665310,LOC107737306,LOC107555752,LOC107556158,LOC108415209,LOC107556155 coding downstream 4609 13397531 ~ 13408044 (-)
LOC122325390 cyp2ad3,LOC107737302,LOC107665316,LOC107555750,LOC107683974,LOC107578499 coding downstream 49853 13359760 ~ 13362800 (-)
LOC122325389 LOC107555750,LOC107683974,LOC107578499 coding downstream 54336 13352203 ~ 13358317 (-)
LOC122325388 LOC107555750 coding downstream 60588 13349162 ~ 13352065 (-)
LOC122324694 cyp2ad6,LOC107665314,LOC107556136 coding downstream 64968 13343150 ~ 13347685 (-)
chst14 chst14,LOC107721361,LOC107683987,LOC107737336,LOC107556138,LOC107555762,LOC107665414 coding upstream 46020 13462277 ~ 13466395 (-)
exoc1 exoc1,LOC107683916,LOC107721360,LOC107555758,LOC107665383,LOC107556159,LOC107737311 coding upstream 50540 13466797 ~ 13478192 (-)
mideasa elmsan1a,LOC107555757,LOC107721359,LOC107683915,LOC107665392,LOC107737312,LOC107556160 coding upstream 66148 13482405 ~ 13492093 (-)
churc1 churc1,LOC107659227,LOC107721357,LOC107555763,LOC107556164 coding upstream 92395 13508652 ~ 13510518 (-)
capn3b capn3b,LOC107659224,LOC107721354,LOC107665384,LOC107737332 coding upstream 100400 13516657 ~ 13526273 (-)
G138159 LOC107556152 non-coding downstream 19058 13388921 ~ 13393595 (-)
G138162 NA non-coding downstream 21310 13385970 ~ 13391343 (-)
G138158 NA non-coding downstream 28690 13379422 ~ 13383963 (-)
G138186 NA non-coding downstream 44143 13367869 ~ 13368510 (-)
LOC122325041 NA non-coding downstream 152173 13214071 ~ 13260480 (-)
G138217 zgc:153896,LOC107721358,LOC107665343,LOC107737337,LOC107556161 non-coding upstream 62515 13478772 ~ 13479024 (-)
G138221 slc35f6,LOC107721386,LOC107555739,LOC107683918,LOC107737338,LOC107665330 non-coding upstream 79425 13495682 ~ 13498026 (-)
G138232 NA non-coding upstream 98508 13514765 ~ 13515133 (-)
G138335 foxq1b,LOC107659165,LOC107721275,LOC107711626,LOC107665328,LOC107555749,LOC107556144 non-coding upstream 414320 13830577 ~ 13832060 (-)
G138351 NA non-coding upstream 433683 13849940 ~ 13850174 (-)
LOC122324483 NA other downstream 148369 13260919 ~ 13264284 (-)
mdn1 mdn1,LOC107755265,LOC107737285,LOC107597457,LOC107683937,LOC107665348,LOC107601919 other downstream 1132341 12241801 ~ 12280312 (-)
G137949 mdn1,LOC107755265,LOC107601919,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other downstream 1188383 12222810 ~ 12224270 (-)
G137967 mdn1,LOC107601919,LOC107755265,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other downstream 1193014 12218763 ~ 12219639 (-)
G137773 LOC107755215,LOC107683983,LOC107601925,LOC107718419,LOC107665290,LOC107597464 other downstream 1729335 11682405 ~ 11683318 (-)
cracd kiaa1211,LOC107555764,LOC107737310,LOC107665299,LOC107556121 other upstream 7701 13423958 ~ 13447388 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other upstream 131019 13547276 ~ 13548591 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other upstream 248249 13664506 ~ 13692007 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other upstream 347078 13763335 ~ 13767824 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other upstream 777476 14193733 ~ 14198528 (-)

Expression


Co-expression Network