G12628


Basic Information

Item Value
gene id G12628
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 359969 ~ 360217 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU14022
GCCAAAAACACAAAATAATGACTTTTCAACAATATCTAGTGATGGGCAATTTCAAAACACTGCTTCATGAGCTTCAAAGCTTTTGTTTTGAATCAGTGGTTCGAATCGCGTAAACGAAGCCTCGTTTACTGAAATCACATGCTCCGAACCACTGATTCGAAACAAAAGATTCGTAAAGCTTCATGAGGCAGTGTTTTGAAATTGCCCATCACTAGATATTGTTGAGAAGTTATTTTGGTGCACAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14022 True 249 lncRNA 0.37 1 359969 360217

Neighbor

gene id symbol gene type direction distance location
CI01000001_00353909_00354838 NA coding upstream 5131 353909 ~ 354838 (+)
CI01000001_00351249_00352199 NA coding upstream 6447 350551 ~ 353522 (+)
CI01000001_00343451_00343828 NA coding upstream 15570 343451 ~ 344399 (+)
CI01000001_00337674_00339265 NA coding upstream 20619 337281 ~ 339350 (+)
CI01000001_00231916_00237164 NA coding upstream 122429 231155 ~ 237540 (+)
CI01000001_00400604_00401694 NA coding downstream 40208 400425 ~ 401924 (+)
CI01000001_00426295_00431004 IYD coding downstream 65848 426065 ~ 431232 (+)
CI01000001_00433013_00435064 NA coding downstream 72796 433013 ~ 435539 (+)
CI01000001_00436821_00439097 NA coding downstream 76604 436731 ~ 439752 (+)
CI01000001_00440891_00444667 HTR6 coding downstream 80674 440891 ~ 444983 (+)
G12618 NA non-coding upstream 213 358871 ~ 359756 (+)
G12627 NA non-coding upstream 1587 358149 ~ 358382 (+)
G12611 NA non-coding upstream 56517 303147 ~ 303452 (+)
G12606 NA non-coding upstream 57472 286059 ~ 302497 (+)
G12604 NA non-coding upstream 76234 283535 ~ 283735 (+)
G12629 NA non-coding downstream 12547 372764 ~ 373485 (+)
G12648 NA non-coding downstream 54279 414496 ~ 416841 (+)
G12656 NA non-coding downstream 58745 418962 ~ 419235 (+)
G12664 NA non-coding downstream 107885 468102 ~ 468433 (+)
G12614 NA other upstream 49028 309144 ~ 310941 (+)
CI01000001_00483853_00488761 VWA1 other downstream 118169 483853 ~ 488825 (+)
G13051 NA other downstream 683496 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1307803 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3256031 3618075 ~ 3621451 (+)
G15794 NA other downstream 4701001 5061218 ~ 5064704 (+)

Expression


Co-expression Network