G13697


Basic Information

Item Value
gene id G13697
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1702984 ~ 1704437 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15301
CTTTATTACATGCAGTTACACAGTCCAGATTTGCACTAGAATTTACGCACGACTTGAACAGAATTCCACACTTAAGTACAAAGTACACTTGATTGACGAAATGCACTTTTCACAAACCAGCTGCCACCGTCACAAGCGCATGGGAGAGGTTCAATCAGTAAAGAAATCTTGAGATTAAAGATCTTTCCACAAACCACTCATGCATCTACATAGACAACAGTTCTCAAGAGCAATACCTGAGGAGTAATACATATAATAATAAAATAAACCGGTGCGTTATAACCAGAGAATGTTAGCTTTGTATTTTCTTATTTAGGCTACTTTTTTGACATATATTTACAGCCACTCTATTATACTTTTCTGTATAATTTTTCAACTGACGTCAAAAAAAAAAAAAAAAAAAAATACTATAATTATACATATACAGCAATAAATATAATCAGCAAAGTAATAACAAATGAAAAAAGAATCAATTAGCTTACGCATTGCAGTAACAGTACAACGATCATGTCAACAGTCCAGAAACAGTCCAGGGTTAGGCACTTAAGACTGGAGAGTACTTACAGCAATAGAAAGTGTCGTTCCAGCCACGATTTGACATCTTTAATGATCATAAAGGCAAACTAATGTACATTGTATGTTGTTTTACATGGAACTGCATCTTATACCGATGGTGTTAATCAAGTCACTGGATCCTCTGATAGCTAAAACAGCCTAAAATGCCACATATACAGTAGCAGTCAACCACATCAACTAATGAACCAAAGTCACTATAAGGCTTCGTACGATTAATGTTTATGGTACAAAATCTTCCAAAGCAGCAACCAGACAGTTCATTAAACCAAATGCACATTATTATTTCAGAGACAAGCTAAAAAAAAACAACCAATCTCTCCATTTTACAGACAAAAAAATGCAGAGACATGCAAATTTTTTGGGTGGTACAGGCCCGAAATATACTCTACGCAAATATGTGAACGCAAACACTTTTAGCTACAGTATGCAAACTGGATTTCACGGTTTTGAAATGTCAGTTCAGAATTCAACAAGTATGGGTTGCATTGCCAACACTGCAGCTATTTACTATTCCCATTATTTCCTTCGATAGGACTGCGATTGAATGAATGGCACAAATATTAAAAGGAAACAATATCCCCGTCGATTACTTAAGTATGTACAGTACGCAAACCCATTTTCACCTCAGAATAAAAAAATAATAAAAGTAACTGTGACTTTTTCCTCACATTTGTGACTTTATATTTGTGATTGTGCCTTTTTATCTTACAATTGTGACTGTAAGATAAACCAGTGTTGGGTAAGTTTGGGTTAGTTCACCCAAAAATGGCAATTCTGTCATCATTTACCCCCCTCACGTTGTTCCAAACCTGTATGAATTTCTTTGTTCTGCTGAACACAAAGGAAGATATTTGGAAGAATGTTTGTAACCAAGCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15301 True 1454 lncRNA 0.35 1 1702984 1704437

Neighbor

gene id symbol gene type direction distance location
CI01000001_01668334_01670035 CAMK2N1B coding upstream 31959 1667762 ~ 1671167 (+)
CI01000001_01656726_01659321 MUL1B, MUL1 coding upstream 43554 1656057 ~ 1659430 (+)
CI01000001_01589727_01595957 NA coding upstream 106695 1589727 ~ 1596289 (+)
CI01000001_01545235_01551987 DNAJC16 coding upstream 150961 1545235 ~ 1552023 (+)
CI01000001_01538233_01543680 NA coding upstream 159146 1538071 ~ 1543838 (+)
CI01000001_01748436_01754956 DDX19A, DDX19B, RP11-529K1.3 coding downstream 43901 1748338 ~ 1754956 (+)
CI01000001_01762809_01771029 CPSF3L coding downstream 58372 1762809 ~ 1771029 (+)
CI01000001_01833609_01860272 CENB5, ACAP3 coding downstream 128824 1833261 ~ 1860953 (+)
CI01000001_01868471_01873459 UBE2J2, UBE2J2.L coding downstream 164034 1868471 ~ 1873519 (+)
CI01000001_01878297_01894123 HIPK1A coding downstream 173860 1878297 ~ 1896084 (+)
G13574 NA non-coding upstream 19861 1682764 ~ 1683123 (+)
G13570 NA non-coding upstream 38492 1664265 ~ 1664492 (+)
G13448 NA non-coding upstream 137427 1560388 ~ 1565557 (+)
G13493 NA non-coding upstream 286332 1416412 ~ 1416652 (+)
G13761 NA non-coding downstream 73948 1778385 ~ 1778757 (+)
G13763 NA non-coding downstream 75719 1780156 ~ 1780359 (+)
G13778 NA non-coding downstream 197834 1902271 ~ 1907118 (+)
G13721 NA non-coding downstream 225067 1929504 ~ 1933413 (+)
G13789 NA non-coding downstream 234673 1939110 ~ 1939319 (+)
G13051 NA other upstream 657832 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 1210927 483853 ~ 488825 (+)
G12614 NA other upstream 1392043 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 1911811 3618075 ~ 3621451 (+)
G15794 NA other downstream 3356781 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 3582312 5279837 ~ 5287698 (+)
G15995 NA other downstream 4007448 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 5828135 7531541 ~ 7540586 (+)

Expression


Co-expression Network