G13761


Basic Information

Item Value
gene id G13761
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1778385 ~ 1778757 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15373
AAAATCATTATTTAAGGATATATAAGGATACGTGTCCGGGAGTCGCCTGTCAATGGCGTCATATCCGCGTTACCCTCGGTTTCCGGTTTTATTTTGTAGAAACCATGGACACACTAAAGACGCTTTAATATATTACATGTTTTATTAGACAAGGGAACAACTGTTTGGTTACATTTATAGACAGAAAACAAATTATTGTTATATAGCTCAACACGTTTAGTCTTGTTGTTTAAATCTAGTTTTCTTGATTTTCCGAGAGTACCATGCTTTTACCATGCCTCAGAGAAAAACACTATTTTGTCTAAGTAGTACAGCATTTTCTCCATCATACAATACGTTTTAAAATTAATTGCATGCCATTTATCAACACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15373 True 373 lncRNA 0.34 1 1778385 1778757

Neighbor

gene id symbol gene type direction distance location
CI01000001_01762809_01771029 CPSF3L coding upstream 7356 1762809 ~ 1771029 (+)
CI01000001_01748436_01754956 DDX19A, DDX19B, RP11-529K1.3 coding upstream 23429 1748338 ~ 1754956 (+)
CI01000001_01668334_01670035 CAMK2N1B coding upstream 107360 1667762 ~ 1671167 (+)
CI01000001_01656726_01659321 MUL1B, MUL1 coding upstream 118955 1656057 ~ 1659430 (+)
CI01000001_01589727_01595957 NA coding upstream 182096 1589727 ~ 1596289 (+)
CI01000001_01833609_01860272 CENB5, ACAP3 coding downstream 54504 1833261 ~ 1860953 (+)
CI01000001_01868471_01873459 UBE2J2, UBE2J2.L coding downstream 89714 1868471 ~ 1873519 (+)
CI01000001_01878297_01894123 HIPK1A coding downstream 99540 1878297 ~ 1896084 (+)
CI01000001_01918301_01923330 NA coding downstream 139246 1918003 ~ 1923379 (+)
CI01000001_01955349_01972242 ZBTB39 coding downstream 176592 1955349 ~ 1973010 (+)
G13697 NA non-coding upstream 73948 1702984 ~ 1704437 (+)
G13574 NA non-coding upstream 95262 1682764 ~ 1683123 (+)
G13570 NA non-coding upstream 113893 1664265 ~ 1664492 (+)
G13448 NA non-coding upstream 212828 1560388 ~ 1565557 (+)
G13763 NA non-coding downstream 1399 1780156 ~ 1780359 (+)
G13778 NA non-coding downstream 123514 1902271 ~ 1907118 (+)
G13721 NA non-coding downstream 150747 1929504 ~ 1933413 (+)
G13789 NA non-coding downstream 160353 1939110 ~ 1939319 (+)
G13791 NA non-coding downstream 196206 1974963 ~ 1975198 (+)
G13051 NA other upstream 733233 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 1286328 483853 ~ 488825 (+)
G12614 NA other upstream 1467444 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 1837491 3618075 ~ 3621451 (+)
G15794 NA other downstream 3282461 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 3507992 5279837 ~ 5287698 (+)
G15995 NA other downstream 3933128 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 5753815 7531541 ~ 7540586 (+)

Expression


Co-expression Network