G14257


Basic Information

Item Value
gene id G14257
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1893706 ~ 1896090 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15955
GTTTATTGTGATTTCATCTACTCTTCACTCCACTTCACATGGTGCTAAAACAGTATAAACAGTCATCATTGCACCAAAGCCAAGAACCCTGGCAACATTCACGAGACGAGCTCAGTACAACACATCAAGTGCTCTAAGATCAACTGAGATGAACAGCTAACATGTTAACCATCTGTCTAAGTGCTATCTAAACAGTTAGTGTTATCTGTGAGAGGTCTCGCTCTTATTTCAATGTGCACAAAGGGCAAGTTCCCACACGACAACACTCCATCCAAACATCATCTTTTAGACATTACAGAACAAATAACAAGTAACTGTCGTCACAATTCACACTGACAAATTCAGTCTTAGGTTATGGATAAAACACTTAAAATACAAATCAAATAATCAACTTAAGTGCTAGTAGTATGAGAGGATACTTTCAAATCAACGTAAAAAAAAAAAAATTATACAAAGTTGAAGAGAATTACAAGGATTTAAATGAAAGAGTAATCATTATTAGGTTAAATAAAAACAGATATAAAGTTCCATTAATAATCCACACATATTCAATAAATAAATTAAGCACAATAAAAGTTACATTGAACATGAAAACTTGATTATTTAGTGCGTAACTAAAAGCTTGTGTCACAAAACTGATATGAAAATAAAATGTCACTTATTAAACATTATATGAAACAGAAAGAATATTTTGAATCATGTTCTTATGGTTATTTCAAGACATTAATGATCTAAAGCTGTTTAAAGCTAATCATAAACAATCCAATTTCAACTAGGACTATTTCAGCATAAATTCGATATATAAAATTTCTGCGCATCACTTTCTCCTGGTATTTTGGCCTGTTCAGGTTCCCGTCACCACCATCAGCGATGACATCCTGTGTCATGTGGCCACCACTTAAAAATACGTTGCAAACGTAACCGTCCCAAATATAAAATTTGGGTCTGCCAACAGAATGCTTTAGTGTTGTCAGAGTGACATCACTATCACGAATCATTTCAACACATTATAATTGGGCAGACGTCAATGAAACCTTATAAATATCTTTCTAGAGGAGAGATCGCTTCTGCTGACGCACATCCCAAAGACAGCTTAAACGCTTAAGAAACGTAATTCTCTGATGGTTCTCTTAAATTCCTCCATTATTTAAATTTTTTTTAAACGTCATTTACATTTTTCAGACTTTACAGTTTTACATGGAATACATGGAATAATAGCGCACTGCTTACTGTGCAGTACACACTACATACCGCCTACTGCGTTTTAAAAATAGTATGCAAAACAGAATTTTCAAGGTATTAAGATTTAGGTGCTTATTTGCAAAGAAAATATAACAAAATTAAAATCTTATATTATCATAATAACATAAGATTCTTAAAATTAATCTTATTATCAATAATAATACTTTTTTGTTGCATTTTTAATCCAATTTTTGTATAAAAATGTCTTAATTTTTGCCAGTCCAATCAAATAAGTCAAGAGAGAGATGTTAAAATTTGTTGTTTCATTTGTCACAATGGAAACAGTTATTCAAGTTAAGTGTGTTGCATTGTGGGATACATTATTTCACACACTGTGGTCTGTTATAGTCATCTTAGTAGGAATCATTTGTAAGTCGCTCTGGACAAAATCTAGTAGGTCATACAGGTGTTTCATTTGCATACTGTATACATGAGTAGTATGCTAGCATGCTATTCCAAACACAGCCATGTTTCAGGCGATTTTGAGGCATTTTTCTGGACATCCACTGGCTTGTTTTCAGACATAATGAGTAATATTTTAAGAAACGGTTGAAATAAGTCCAGCGTTTTGTGTTTATGGCATGGTTTGAAATGATCTAAAATGCAAGAAGTGCTCCTTTGAAATGCTGCAAGATGCTAAAATGGCATTTCCACTTGAACATCCATGACAGCATCTTGACATTTTCCACCAGCACATATCAAACCTCACGTTCAGATCTTCCTCCTCACAGGTACGGGTACTGGTTGAGTTTCCTCTGGCTGAGGGGAAACGCTGCAGGGTATGCGTACAGGCTGGAGGCGGAGCCGAAGAGCGACGCTTCATGAAGCCTGTAGGAGTGGGAGGGGCCTGTAGGAGGGTAGGTGGGTTGGCGTCTCAGAGATCCGCCCCCTGCACGATCGTGGGATGACATCATTGATTGCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15955 True 2166 lncRNA 0.26 2 1893706 1896090

Neighbor

gene id symbol gene type direction distance location
CI01000001_01873684_01874535 NA coding downstream 19171 1873640 ~ 1874535 (-)
CI01000001_01772744_01773670 NA coding downstream 120036 1772331 ~ 1773670 (-)
CI01000001_01760676_01761671 CPTP coding downstream 132035 1760166 ~ 1761671 (-)
CI01000001_01757774_01758445 NA coding downstream 134263 1757189 ~ 1759443 (-)
CI01000001_01707363_01743870 VWA5B1 coding downstream 149836 1707089 ~ 1743870 (-)
CI01000001_01902970_01917410 MARCH9 coding upstream 6339 1902429 ~ 1917454 (-)
CI01000001_01932927_01933914 TSPAN31 coding upstream 36531 1932621 ~ 1933914 (-)
CI01000001_01976950_01992032 GPR182, PIP4K2CA, PIP4K2C coding upstream 80626 1976716 ~ 1993561 (-)
CI01000001_01999489_02002753 IGFBP6B, IGFBP6 coding upstream 102038 1998128 ~ 2002928 (-)
CI01000001_02057429_02071506 LIMA1A coding upstream 160724 2056814 ~ 2071506 (-)
G14112 NA non-coding downstream 22140 1867635 ~ 1871566 (-)
G14104 NA non-coding downstream 122238 1763669 ~ 1771468 (-)
G14100 NA non-coding downstream 138715 1754447 ~ 1754991 (-)
G14096 NA non-coding downstream 140475 1749106 ~ 1753231 (-)
G13679 NA non-coding downstream 216813 1676539 ~ 1676893 (-)
G14259 NA non-coding upstream 24505 1920595 ~ 1920846 (-)
G14261 NA non-coding upstream 25809 1921899 ~ 1922240 (-)
G14267 NA non-coding upstream 79105 1975195 ~ 1975867 (-)
G14217 NA non-coding upstream 108071 2004161 ~ 2005063 (-)
G14213 NA non-coding upstream 109205 2005295 ~ 2007049 (-)
CI01000001_00362143_00378213 NA other downstream 1496573 361614 ~ 378213 (-)
CI01000001_00238241_00249437 NA other downstream 1636189 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 1758781 122814 ~ 131380 (-)
G14219 NA other upstream 98120 1994210 ~ 1994898 (-)
G14228 NA other upstream 159884 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 363299 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 2496224 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 2580194 4468209 ~ 4523431 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G158882 NA non-coding NC_056721.1 CM032090.1 18041910 ~ 18043476 (-)