Gene
RNA
| Item | Value |
|---|---|
| gene id | G13796 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 2004161 ~ 2005163 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU15415 | False | 1003 | lncRNA | 0.40 | 1 | 2004161 | 2005163 |
| TU15414 | True | 871 | lncRNA | 0.37 | 1 | 2004190 | 2005060 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_01955349_01972242 | ZBTB39 | coding | upstream | 31151 | 1955349 ~ 1973010 (+) |
| CI01000001_01918301_01923330 | NA | coding | upstream | 80782 | 1918003 ~ 1923379 (+) |
| CI01000001_01878297_01894123 | HIPK1A | coding | upstream | 108077 | 1878297 ~ 1896084 (+) |
| CI01000001_01868471_01873459 | UBE2J2, UBE2J2.L | coding | upstream | 130642 | 1868471 ~ 1873519 (+) |
| CI01000001_01833609_01860272 | CENB5, ACAP3 | coding | upstream | 143208 | 1833261 ~ 1860953 (+) |
| CI01000001_02009224_02019961 | SPRYD3 | coding | downstream | 1931 | 2007094 ~ 2020191 (+) |
| CI01000001_02084996_02088477 | NA | coding | downstream | 79833 | 2084996 ~ 2089332 (+) |
| CI01000001_02090800_02101722 | CSAD | coding | downstream | 85524 | 2090687 ~ 2101866 (+) |
| CI01000001_02106280_02114656 | ZNF740B, ZNF740 | coding | downstream | 100816 | 2105979 ~ 2115251 (+) |
| CI01000001_02152125_02157921 | NFE2 | coding | downstream | 146858 | 2151932 ~ 2158623 (+) |
| G13726 | NA | non-coding | upstream | 20549 | 1981627 ~ 1983612 (+) |
| G13791 | NA | non-coding | upstream | 28963 | 1974963 ~ 1975198 (+) |
| G13789 | NA | non-coding | upstream | 64842 | 1939110 ~ 1939319 (+) |
| G13721 | NA | non-coding | upstream | 70748 | 1929504 ~ 1933413 (+) |
| G13778 | NA | non-coding | upstream | 97043 | 1902271 ~ 1907118 (+) |
| G13722 | NA | non-coding | downstream | 65991 | 2071154 ~ 2076549 (+) |
| G13735 | NA | non-coding | downstream | 96994 | 2102157 ~ 2103468 (+) |
| G13812 | NA | non-coding | downstream | 138494 | 2143657 ~ 2143868 (+) |
| G13813 | NA | non-coding | downstream | 142038 | 2147201 ~ 2147756 (+) |
| G13815 | NA | non-coding | downstream | 144715 | 2149878 ~ 2150195 (+) |
| CI01000001_01668334_01670035 | CAMK2N1B | other | upstream | 333157 | 1667762 ~ 1671167 (+) |
| G13051 | NA | other | upstream | 959009 | 1043713 ~ 1045152 (+) |
| CI01000001_00483853_00488761 | VWA1 | other | upstream | 1512104 | 483853 ~ 488825 (+) |
| G12614 | NA | other | upstream | 1693220 | 309144 ~ 310941 (+) |
| CI01000001_03618075_03620436 | NA | other | downstream | 1611085 | 3618075 ~ 3621451 (+) |
| G15794 | NA | other | downstream | 3056055 | 5061218 ~ 5064704 (+) |
| CI01000001_05279884_05287123 | NA | other | downstream | 3281586 | 5279837 ~ 5287698 (+) |
| G15995 | NA | other | downstream | 3706722 | 5711885 ~ 5714951 (+) |
| CI01000001_07531945_07539781 | NA | other | downstream | 5527409 | 7531541 ~ 7540586 (+) |
