Gene
RNA
| Item | Value |
|---|---|
| gene id | G13813 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 2147201 ~ 2147756 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU15434 | True | 556 | lncRNA | 0.54 | 1 | 2147201 | 2147756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_02106280_02114656 | ZNF740B, ZNF740 | coding | upstream | 31950 | 2105979 ~ 2115251 (+) |
| CI01000001_02090800_02101722 | CSAD | coding | upstream | 45335 | 2090687 ~ 2101866 (+) |
| CI01000001_02084996_02088477 | NA | coding | upstream | 57869 | 2084996 ~ 2089332 (+) |
| CI01000001_02009224_02019961 | SPRYD3 | coding | upstream | 127010 | 2007094 ~ 2020191 (+) |
| CI01000001_01955349_01972242 | ZBTB39 | coding | upstream | 174191 | 1955349 ~ 1973010 (+) |
| CI01000001_02152125_02157921 | NFE2 | coding | downstream | 4265 | 2151932 ~ 2158623 (+) |
| CI01000001_02166796_02171151 | CBX5 | coding | downstream | 19040 | 2166796 ~ 2172179 (+) |
| CI01000001_02393859_02406849 | CALCOCO1A | coding | downstream | 246103 | 2393859 ~ 2407235 (+) |
| CI01000001_02492831_02495337 | NA | coding | downstream | 344675 | 2492431 ~ 2495411 (+) |
| CI01000001_02505727_02507172 | MFSD5 | coding | downstream | 357639 | 2505395 ~ 2507357 (+) |
| G13812 | NA | non-coding | upstream | 3333 | 2143657 ~ 2143868 (+) |
| G13735 | NA | non-coding | upstream | 43733 | 2102157 ~ 2103468 (+) |
| G13722 | NA | non-coding | upstream | 70652 | 2071154 ~ 2076549 (+) |
| G13796 | NA | non-coding | upstream | 142038 | 2004161 ~ 2005163 (+) |
| G13726 | NA | non-coding | upstream | 163589 | 1981627 ~ 1983612 (+) |
| G13815 | NA | non-coding | downstream | 2122 | 2149878 ~ 2150195 (+) |
| G13822 | NA | non-coding | downstream | 36662 | 2184418 ~ 2196173 (+) |
| G13887 | NA | non-coding | downstream | 109732 | 2257488 ~ 2257865 (+) |
| G13898 | NA | non-coding | downstream | 143048 | 2290804 ~ 2297211 (+) |
| CI01000001_01668334_01670035 | CAMK2N1B | other | upstream | 476197 | 1667762 ~ 1671167 (+) |
| G13051 | NA | other | upstream | 1102049 | 1043713 ~ 1045152 (+) |
| CI01000001_00483853_00488761 | VWA1 | other | upstream | 1655144 | 483853 ~ 488825 (+) |
| G12614 | NA | other | upstream | 1836260 | 309144 ~ 310941 (+) |
| CI01000001_03618075_03620436 | NA | other | downstream | 1468492 | 3618075 ~ 3621451 (+) |
| G15794 | NA | other | downstream | 2913462 | 5061218 ~ 5064704 (+) |
| CI01000001_05279884_05287123 | NA | other | downstream | 3138993 | 5279837 ~ 5287698 (+) |
| G15995 | NA | other | downstream | 3564129 | 5711885 ~ 5714951 (+) |
| CI01000001_07531945_07539781 | NA | other | downstream | 5384816 | 7531541 ~ 7540586 (+) |
