G13815


Basic Information

Item Value
gene id G13815
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2149878 ~ 2150195 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15436
CAATTTAAATAAATAAATGTAAATTAATATATACAGTCTAACCAAAATTTATTCAGACACCTTGAACATTTCATTCATTAATACAGTTTATTCACTATAGTTTAAAAAAATGGTAAAGAGTTAAACTGTGTCAGAAAAAAATAATCTTAATTATGTCAGATAACACTTAAGCAAAACATGGTCAGGTCAAAGTGTCTGAATAATTTTTGGTCCCAGATTTTTATCAATTTTACTGGTAGTCCACTGTATGAATAATTTTTGGGTATAATATGTCACAGTTTACTTTATATTGCTATCCTAAACTATAGTGTCCTGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15436 True 318 lncRNA 0.27 1 2149878 2150195

Neighbor

gene id symbol gene type direction distance location
CI01000001_02106280_02114656 ZNF740B, ZNF740 coding upstream 34627 2105979 ~ 2115251 (+)
CI01000001_02090800_02101722 CSAD coding upstream 48012 2090687 ~ 2101866 (+)
CI01000001_02084996_02088477 NA coding upstream 60546 2084996 ~ 2089332 (+)
CI01000001_02009224_02019961 SPRYD3 coding upstream 129687 2007094 ~ 2020191 (+)
CI01000001_01955349_01972242 ZBTB39 coding upstream 176868 1955349 ~ 1973010 (+)
CI01000001_02152125_02157921 NFE2 coding downstream 1826 2151932 ~ 2158623 (+)
CI01000001_02166796_02171151 CBX5 coding downstream 16601 2166796 ~ 2172179 (+)
CI01000001_02393859_02406849 CALCOCO1A coding downstream 243664 2393859 ~ 2407235 (+)
CI01000001_02492831_02495337 NA coding downstream 342236 2492431 ~ 2495411 (+)
CI01000001_02505727_02507172 MFSD5 coding downstream 355200 2505395 ~ 2507357 (+)
G13813 NA non-coding upstream 2122 2147201 ~ 2147756 (+)
G13812 NA non-coding upstream 6010 2143657 ~ 2143868 (+)
G13735 NA non-coding upstream 46410 2102157 ~ 2103468 (+)
G13722 NA non-coding upstream 73329 2071154 ~ 2076549 (+)
G13796 NA non-coding upstream 144715 2004161 ~ 2005163 (+)
G13822 NA non-coding downstream 34223 2184418 ~ 2196173 (+)
G13887 NA non-coding downstream 107293 2257488 ~ 2257865 (+)
G13898 NA non-coding downstream 140609 2290804 ~ 2297211 (+)
G13922 NA non-coding downstream 217784 2367979 ~ 2368211 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 478874 1667762 ~ 1671167 (+)
G13051 NA other upstream 1104726 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 1657821 483853 ~ 488825 (+)
G12614 NA other upstream 1838937 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 1466053 3618075 ~ 3621451 (+)
G15794 NA other downstream 2911023 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 3136554 5279837 ~ 5287698 (+)
G15995 NA other downstream 3561690 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 5382377 7531541 ~ 7540586 (+)

Expression


Co-expression Network