G14458


Basic Information

Item Value
gene id G14458
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2662288 ~ 2662712 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU16180
GTCAACTTTGCATTTAATATGCTTTGATATACACTCTGTAAACAGCCACCCCATTCAGTAATGACCTTCTGTGACTTACTCTCTTTGTGGAGGGTGTCAATGATTGTCTCCTGGACCATTGCCAAGTTAGCAGTCTTCCCCATTAGTGTGGTTTCAAAGAACAAAAGATACCCGGAATTTATACTGTAGGGATGGTCATTTAATGAAACTCAAATGTAAATATTCTAATATTTTGAGATACTGGATTTTGGACTTTCATGAGCTGTACGCTCTAATCAACAAATTAAAAAAAAAAACTTTTGAAATGTTTTACTTTACATGTAGGGAATCTAGAATATATGAAAGTTTCATTTTTTAAAATAATTTACAATAAAAAAATGAACTTTTTCACGATATTCTAATTATATGACCAGCACCTGTATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16180 True 425 lncRNA 0.32 1 2662288 2662712

Neighbor

gene id symbol gene type direction distance location
CI01000001_02641721_02653037 ACP1 coding downstream 9251 2641546 ~ 2653037 (-)
CI01000001_02581454_02591012 CCNT1 coding downstream 71276 2581314 ~ 2591012 (-)
CI01000001_02570315_02577096 PMELB coding downstream 85166 2569989 ~ 2577122 (-)
CI01000001_02547325_02557711 TUBA1C, TUBA1B, TUBA1A, TUBA1D coding downstream 104563 2547195 ~ 2557725 (-)
CI01000001_02510977_02523145 GDAP1L1 coding downstream 139143 2510834 ~ 2523145 (-)
CI01000001_02679428_02695867 NA coding upstream 16065 2678777 ~ 2697902 (-)
CI01000001_02863703_02865768 NA coding upstream 200050 2862762 ~ 2865768 (-)
CI01000001_03083837_03089846 PLXNA1 coding upstream 421125 3083837 ~ 3090718 (-)
CI01000001_03092786_03156426 NA coding upstream 428836 3091548 ~ 3157420 (-)
CI01000001_03165168_03197970 NA coding upstream 502252 3164964 ~ 3198261 (-)
G14445 NA non-coding downstream 37768 2624307 ~ 2624520 (-)
G14214 NA non-coding downstream 188699 2470195 ~ 2473589 (-)
G14344 NA non-coding downstream 258540 2403177 ~ 2403748 (-)
G14194 NA non-coding downstream 263370 2398155 ~ 2398918 (-)
G14335 NA non-coding downstream 294181 2367858 ~ 2368107 (-)
G14383 NA non-coding upstream 95355 2758067 ~ 2839789 (-)
G14492 NA non-coding upstream 225112 2887824 ~ 2888448 (-)
CI01000001_03213566_03220085 NA non-coding upstream 555500 3213274 ~ 3220866 (-)
G15007 NA non-coding upstream 653109 3315821 ~ 3316045 (-)
G15037 NA non-coding upstream 663314 3326026 ~ 3326361 (-)
CI01000001_02258523_02262621 NA other downstream 365076 2258442 ~ 2263103 (-)
G14228 NA other downstream 605810 2055974 ~ 2056478 (-)
G14219 NA other downstream 667390 1994210 ~ 1994898 (-)
G14104 NA other downstream 894830 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 2265155 361614 ~ 378213 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1729602 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 1813572 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 1906370 4725927 ~ 4728210 (-)
G15736 NA other upstream 2138189 4800901 ~ 4801395 (-)
G16332 NA other upstream 2287977 4950689 ~ 4957842 (-)

Expression


Co-expression Network