Gene
RNA
| Item | Value |
|---|---|
| gene id | G15007 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 3315821 ~ 3316045 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU16775 | True | 225 | lncRNA | 0.51 | 1 | 3315821 | 3316045 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000001_03277026_03283028 | PLXNA1 | coding | downstream | 32371 | 3275743 ~ 3283450 (-) |
| CI01000001_03256512_03264159 | NA | coding | downstream | 51216 | 3256512 ~ 3264605 (-) |
| CI01000001_03248474_03248737 | NA | coding | downstream | 66997 | 3247731 ~ 3248824 (-) |
| CI01000001_03213566_03220085 | NA | coding | downstream | 95616 | 3213274 ~ 3220866 (-) |
| CI01000001_03165168_03197970 | NA | coding | downstream | 117560 | 3164964 ~ 3198261 (-) |
| CI01000001_03402460_03453617 | CHCHD6A | coding | upstream | 86415 | 3402460 ~ 3453617 (-) |
| CI01000001_03455306_03461493 | SARS | coding | upstream | 138562 | 3454607 ~ 3461902 (-) |
| CI01000001_03465138_03473769 | NA | coding | upstream | 148688 | 3464733 ~ 3473769 (-) |
| CI01000001_03474495_03481164 | NA | coding | upstream | 158450 | 3474495 ~ 3481433 (-) |
| CI01000001_03489900_03496853 | PROSC | coding | upstream | 172841 | 3488886 ~ 3496853 (-) |
| G14492 | NA | non-coding | downstream | 427373 | 2887824 ~ 2888448 (-) |
| G14383 | NA | non-coding | downstream | 476032 | 2758067 ~ 2839789 (-) |
| G14458 | NA | non-coding | downstream | 653109 | 2662288 ~ 2662712 (-) |
| G14445 | NA | non-coding | downstream | 691301 | 2624307 ~ 2624520 (-) |
| G15037 | NA | non-coding | upstream | 9981 | 3326026 ~ 3326361 (-) |
| G15050 | NA | non-coding | upstream | 27348 | 3343393 ~ 3343791 (-) |
| G15052 | NA | non-coding | upstream | 28926 | 3344971 ~ 3345395 (-) |
| G15064 | NA | non-coding | upstream | 48989 | 3365034 ~ 3365233 (-) |
| G15065 | NA | non-coding | upstream | 49392 | 3365437 ~ 3365845 (-) |
| CI01000001_02258523_02262621 | NA | other | downstream | 1018609 | 2258442 ~ 2263103 (-) |
| G14228 | NA | other | downstream | 1259343 | 2055974 ~ 2056478 (-) |
| G14219 | NA | other | downstream | 1320923 | 1994210 ~ 1994898 (-) |
| G14104 | NA | other | downstream | 1548363 | 1763669 ~ 1771468 (-) |
| CI01000001_00362143_00378213 | NA | other | downstream | 2918688 | 361614 ~ 378213 (-) |
| CI01000001_04395469_04399381 | FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A | other | upstream | 1076269 | 4392314 ~ 4399804 (-) |
| CI01000001_04468566_04523431 | DNMT3BB.1 | other | upstream | 1160239 | 4468209 ~ 4523431 (-) |
| CI01000001_04726550_04727511 | PDPFB, PPDPFB, PPDPF | other | upstream | 1253037 | 4725927 ~ 4728210 (-) |
| G15736 | NA | other | upstream | 1484856 | 4800901 ~ 4801395 (-) |
| G16332 | NA | other | upstream | 1634644 | 4950689 ~ 4957842 (-) |
