G158609


Basic Information

Item Value
gene id G158609
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17339267 ~ 17343385 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU234899
CTCAGTTCTGTGGGTGAGCTTGTGGTGGCTTCGCACCGTTGTGCTTTGGCTTGAACGCTGCTTACTTTCTACCAGTTGTCGGTCTGAAGTGTAACTTTAATAATAGTGACCTGCACCTTCAACTAGAAGTAGTTTATCCGCGACTTTAACACTTCAAGCagGTGTCCGTTTCACTACAGCCATGACTTTCACCATGACTAGCATTTCACCTACTGggATAGAAGTTGCGTCAACAACTGCAGCTCCACCGCAAACAGACATGACTGTCATCGGAGTGGTGATTGCCCTGATCCTGCTGACCCTTGTTGTCTGCGGGTTCCTGCTGTACAGATACCTGTGCCACAGTAAGGGCGTTTACAGAACCGCAGGTGAGCCCGCTCCAGGAGTGGACCCTGATCAGGTCTACAATGACACCGTCACCGAAAACAAGAAGGAATACTTCATCTGAACTGCTTCGCATCGGAGGGATTTACCCCGTGATCAGTATGCATGGGCTGCTGCAGACATCTAAACGGTCTATGTAGAGACATACGGGACATTAACCACTAGTCTGTGCTGTGTGAAAGAATGTTTAGTTGAAGGGATACAGGTCGAGTTTTATGTTGGGAGGATAAGCCGGAAGTTAAAATTTGTTCATTCATGAGGTCAATAAGCTCACCGTCGGTTTTCGTATGGTAAAGTTAACGGGGAAGTTACTTTTCCTGTCATATTGTTATGCCTTTTGTATATAGTTTatagttcactccaaaaacaaaacaaaaaaaacctcgcTGCTTCATCAGAAATTACAAGACGTTCATATGGAGTAGTTATCAACAAGTTATTTATCAGTAACTATGGAATTATTATGAGTTATTACTAGAGTTCAGGTAGCATAAGTGGCACTGCATCTCAATCAAcaaatttggttttatttagttataaatCAATATTGTGTTAATTTGCAACTTTTCAATATGCCTTTtgcatttgattacattttttttttaattatttattggcAGAATTTTTACATTATGAATAGTTGGAGAGTCCGCTATTACAGTGccttgtaaaacattttaaatgtattttacttttttttttttaaattgaaacattttataattcaaaatgtatttttgttacgTAGGCATGCCAAATATAATACCTCTGTCATTatttgtaaaacacacacatgctgatCATAATATCAAATGCATATATGATACTTGATATTTTTGTGCAGGG

Function

GO:

id name namespace
GO:0008537 proteasome activator complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234899 True 1230 TUCP 0.39 4 17339267 17343385

Neighbor

gene id symbol gene type direction distance location
pou6f1 pou6f1,LOC107671889,LOC107715037,LOC107598516,LOC107756417,LOC107697973 coding downstream 8380 17316628 ~ 17330887 (-)
tfcp2 tfcp2,LOC107671887,LOC107715039,LOC107756415,LOC106572516 coding downstream 23877 17303211 ~ 17315390 (-)
csrnp2 csrnp2,LOC107671888,LOC107715040,LOC107594006,LOC107598537,LOC107756414 coding downstream 36702 17294178 ~ 17302565 (-)
itga5 itga5,LOC107671874,LOC107697976,LOC107594039 coding downstream 81103 17214599 ~ 17258164 (-)
hrct1 chia,LOC107671898,LOC107594041,LOC107756356 coding downstream 162778 17171113 ~ 17176489 (-)
bin2a LOC107671903,LOC107715035,LOC107594002,LOC107697868,LOC107598577,LOC107756358 coding upstream 717 17344102 ~ 17350948 (-)
racgap1 racgap1,LOC107671897,LOC107594001,LOC107697971,LOC107756422,LOC107714933,LOC107599350 coding upstream 10762 17354147 ~ 17361384 (-)
tmed4 tmed4,LOC107594055,LOC107671834,LOC107715031,LOC107598625,LOC107697966,LOC107707037 coding upstream 90347 17433732 ~ 17438013 (-)
LOC122328974 agmat,LOC107714919,LOC102790280 coding upstream 430020 17773405 ~ 17777920 (-)
pink1 pink1,LOC107714979,LOC107697909,LOC107751829 coding upstream 435089 17778474 ~ 17784124 (-)
G158608 dazap2,LOC107715036,LOC107594003,LOC107671873,LOC107756418,LOC107598568 non-coding downstream 348 17311328 ~ 17338919 (-)
G158605 NA non-coding downstream 47724 17289971 ~ 17291543 (-)
G158591 NA non-coding downstream 113698 17152825 ~ 17225569 (-)
G158587 NA non-coding downstream 256583 17082207 ~ 17082684 (-)
G158484 NA non-coding downstream 610924 16728101 ~ 16728343 (-)
G158628 NA non-coding upstream 39957 17383342 ~ 17386554 (-)
G158632 NA non-coding upstream 50636 17394021 ~ 17395422 (-)
G158706 LOC107599375,LOC107715025,LOC107671876,LOC107594031,LOC104946192 non-coding upstream 403145 17746530 ~ 17748502 (-)
LOC122328377 NA non-coding upstream 456457 17799842 ~ 17844102 (-)
G158774 NA non-coding upstream 600540 17943925 ~ 17944160 (-)
slc48a1a slc48a1a,LOC107671836,LOC107598487,LOC107594008,LOC107756371,LOC107697869,LOC107757747 other downstream 154882 17176625 ~ 17184385 (-)
G158336 LOC107716221,LOC107570608,LOC107586536,LOC106567035 other downstream 980562 16355369 ~ 16358705 (-)
tac3a LOC107708854,LOC107571761,LOC107681951,LOC107586540,LOC107695797 other downstream 1095872 16240810 ~ 16243395 (-)
G158288 LOC107708856,LOC107570569,LOC107716212,LOC107681953,LOC107695729 other downstream 1169433 16143833 ~ 16169834 (-)
G158231 NA other downstream 1330352 16008106 ~ 16008915 (-)
coq10a si:dkey-190g6.2,LOC107671896,LOC107715030,LOC107598614,LOC107697969,LOC102210977,LOC108425511,LOC102797363 other upstream 70318 17413703 ~ 17422517 (-)
march9 march9,LOC107593952,LOC107664138,LOC107714987,LOC107706970,LOC107599679,LOC107697857,LOC107088728,LOC108433385,LOC103130462,LOC105930772 other upstream 702541 18045926 ~ 18058739 (-)
hnrnpa1b hnrnpa1b,LOC107664187,LOC107714994,LOC107707002 other upstream 888258 18231643 ~ 18235536 (-)
hoxc1a LOC107598919,LOC107707004,LOC107697929,LOC107594049,LOC107664160,LOC107714959 other upstream 952661 18296046 ~ 18302575 (-)
hoxc6a hoxc6a,LOC107593966,LOC107664205,LOC107714999,LOC107706971,LOC107697939,LOC107598897 other upstream 998949 18342334 ~ 18350347 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G14846 NA unknown CI01000001 null 3616248 ~ 3616411 (+)